Search Results - "Fadrosh, Douglas W."

An improved dual-indexing approach for multiplexed 16S rRNA gene sequencing on the Illumina MiSeq platform by Fadrosh, Douglas W, Ma, Bing, Gajer, Pawel, Sengamalay, Naomi, Ott, Sandra, Brotman, Rebecca M, Ravel, Jacques

“…To take advantage of affordable high-throughput next-generation sequencing technologies to characterize microbial community composition often requires the…”
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Moraxella-dominated pediatric nasopharyngeal microbiota associate with upper respiratory infection and sinusitis by McCauley, Kathryn E, DeMuri, Gregory, Lynch, Kole, Fadrosh, Douglas W, Santee, Clark, Nagalingam, Nabeetha N, Wald, Ellen R, Lynch, Susan V

“…Distinct bacterial upper airway microbiota structures have been described in pediatric populations, and relate to risk of respiratory viral infection and,…”
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Gut-Resident Lactobacillus Abundance Associates with IDO1 Inhibition and Th17 Dynamics in SIV-Infected Macaques by Vujkovic-Cvijin, Ivan, Swainson, Louise A., Chu, Simon N., Ortiz, Alexandra M., Santee, Clark A., Petriello, Annalise, Dunham, Richard M., Fadrosh, Douglas W., Lin, Din L., Faruqi, Ali A., Huang, Yong, Apetrei, Cristian, Pandrea, Ivona, Hecht, Frederick M., Pilcher, Christopher D., Klatt, Nichole R., Brenchley, Jason M., Lynch, Susan V., McCune, Joseph M.

“…Gut microbes can profoundly modulate mucosal barrier-promoting Th17 cells in mammals. A salient feature of HIV/simian immunodeficiency virus (SIV)…”
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Metagenomic exploration of viruses throughout the Indian Ocean by Williamson, Shannon J, Allen, Lisa Zeigler, Lorenzi, Hernan A, Fadrosh, Douglas W, Brami, Daniel, Thiagarajan, Mathangi, McCrow, John P, Tovchigrechko, Andrey, Yooseph, Shibu, Venter, J Craig

“…The characterization of global marine microbial taxonomic and functional diversity is a primary goal of the Global Ocean Sampling Expedition. As part of this…”
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Daily temporal dynamics of vaginal microbiota before, during and after episodes of bacterial vaginosis by Ravel, Jacques, Brotman, Rebecca M, Gajer, Pawel, Ma, Bing, Nandy, Melissa, Fadrosh, Douglas W, Sakamoto, Joyce, Koenig, Sara Sk, Fu, Li, Zhou, Xia, Hickey, Roxana J, Schwebke, Jane R, Forney, Larry J

“…Bacterial vaginosis (BV) is a common gynecologic diagnosis characterized by dysbiosis of the vaginal microbiota. It is often accompanied by vaginal symptoms…”
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Associations between the gut microbiota and host immune markers in pediatric multiple sclerosis and controls by Tremlett, Helen, Fadrosh, Douglas W, Faruqi, Ali A, Hart, Janace, Roalstad, Shelly, Graves, Jennifer, Spencer, Collin M, Lynch, Susan V, Zamvil, Scott S, Waubant, Emmanuelle

“…As little is known of association(s) between gut microbiota profiles and host immunological markers, we explored these in children with and without multiple…”
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Compositional differences in particle-associated and free-living microbial assemblages from an extreme deep-ocean environment by Eloe, Emiley A., Shulse, Christine N., Fadrosh, Douglas W., Williamson, Shannon J., Allen, Eric E., Bartlett, Douglas H.

“…Summary Relatively little information is available for the composition of microbial communities present in hadal environments, the deepest marine locations…”
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Hydroxyapatite-Mediated Separation of Double-Stranded DNA, Single-Stranded DNA, and RNA Genomes from Natural Viral Assemblages by ANDREWS-PFANNKOCH, Cynthia, FADROSH, Douglas W, THORPE, Joyce, WILLIAMSON, Shannon J

“…Classifications Services AEM Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Distinct lung microbiota associate with HIV-associated chronic lung disease in children by Bhadriraju, Sudha, Fadrosh, Douglas W., Shenoy, Meera K., Lin, Din L., Lynch, Kole V., McCauley, Kathryn, Ferrand, Rashida A., Majonga, Edith D., McHugh, Grace, Huang, Laurence, Lynch, Susan V., Metcalfe, John Z.

“…Chronic lung disease (CLD) is a common co-morbidity for HIV-positive children and adolescents on antiretroviral therapy (ART) in sub-Saharan Africa. In this…”
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Characterizing the gut microbiome in trauma: significant changes in microbial diversity occur early after severe injury by Howard, Benjamin M, Kornblith, Lucy Z, Christie, Sabrinah A, Conroy, Amanda S, Nelson, Mary F, Campion, Eric M, Callcut, Rachael A, Calfee, Carolyn S, Lamere, Brandon J, Fadrosh, Douglas W, Lynch, Susan, Cohen, Mitchell Jay

“…BackgroundRecent studies have demonstrated the vital influence of commensal microbial communities on human health. The central role of the gut in the response…”
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Going deeper: metagenome of a hadopelagic microbial community by Eloe, Emiley A, Fadrosh, Douglas W, Novotny, Mark, Zeigler Allen, Lisa, Kim, Maria, Lombardo, Mary-Jane, Yee-Greenbaum, Joyclyn, Yooseph, Shibu, Allen, Eric E, Lasken, Roger, Williamson, Shannon J, Bartlett, Douglas H

“…The paucity of sequence data from pelagic deep-ocean microbial assemblages has severely restricted molecular exploration of the largest biome on Earth. In this…”
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Gut microbiota in HIV-pneumonia patients is related to peripheral CD4 counts, lung microbiota, and in vitro macrophage dysfunction by Shenoy, Meera K, Fadrosh, Douglas W, Lin, Din L, Worodria, William, Byanyima, Patrick, Musisi, Emmanuel, Kaswabuli, Sylvia, Zawedde, Josephine, Sanyu, Ingvar, Chang, Emily, Fong, Serena, McCauley, Kathryn, Davis, J Lucian, Huang, Laurence, Lynch, Susan V

“…Pneumonia is common and frequently fatal in HIV-infected patients, due to rampant, systemic inflammation and failure to control microbial infection. While…”
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Metagenomic investigation of microbes and viruses in patients with jaw osteonecrosis associated with bisphosphonate therapy by Sedghizadeh, Parish P., DDS, MS, Yooseph, Shibu, PhD, Fadrosh, Douglas W., MS, Zeigler-Allen, Lisa, PhD, Thiagarajan, Mathangi, MS, Salek, Hamid, DDS, Farahnik, Farid, BS, Williamson, Shannon J., PhD

“…Objective The goal of this preliminary study was to use metagenomic approaches to investigate the taxonomic diversity of microorganisms in patients with…”
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Distinct nasal airway bacterial microbiotas differentially relate to exacerbation in pediatric patients with asthma by McCauley, Kathryn, Durack, Juliana, Valladares, Ricardo, Fadrosh, Douglas W., Lin, Din L., Calatroni, Agustin, LeBeau, Petra K., Tran, Hoang T., Fujimura, Kei E., LaMere, Brandon, Merana, Geil, Lynch, Kole, Cohen, Robyn T., Pongracic, Jacqueline, Khurana Hershey, Gurjit K., Kercsmar, Carolyn M., Gill, Michelle, Liu, Andrew H., Kim, Haejin, Kattan, Meyer, Teach, Stephen J., Togias, Alkis, Boushey, Homer A., Gern, James E., Jackson, Daniel J., Lynch, Susan V.

“…In infants, distinct nasopharyngeal bacterial microbiotas differentially associate with the incidence and severity of acute respiratory tract infection and…”
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The vaginal microbiota of pregnant women who subsequently have spontaneous preterm labor and delivery and those with a normal delivery at term by Romero, Roberto, Hassan, Sonia S, Gajer, Pawel, Tarca, Adi L, Fadrosh, Douglas W, Bieda, Janine, Chaemsaithong, Piya, Miranda, Jezid, Chaiworapongsa, Tinnakorn, Ravel, Jacques

“…This study was undertaken to determine whether the vaginal microbiota of pregnant women who subsequently had a spontaneous preterm delivery is different from…”
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The composition and stability of the vaginal microbiota of normal pregnant women is different from that of non-pregnant women by Romero, Roberto, Hassan, Sonia S, Gajer, Pawel, Tarca, Adi L, Fadrosh, Douglas W, Nikita, Lorraine, Galuppi, Marisa, Lamont, Ronald F, Chaemsaithong, Piya, Miranda, Jezid, Chaiworapongsa, Tinnakorn, Ravel, Jacques

“…This study was undertaken to characterize the vaginal microbiota throughout normal human pregnancy using sequence-based techniques. We compared the vaginal…”
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Gut microbiota in early pediatric multiple sclerosis: a case−control study by Tremlett, H., Fadrosh, D. W., Faruqi, A. A., Zhu, F., Hart, J., Roalstad, S., Graves, J., Lynch, S., Waubant, E.

“…Background and purpose Alterations in the gut microbial community composition may be influential in neurological disease. Microbial community profiles were…”
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Gut microbiota composition and relapse risk in pediatric MS: A pilot study by Tremlett, Helen, Fadrosh, Douglas W, Faruqi, Ali A, Hart, Janace, Roalstad, Shelly, Graves, Jennifer, Lynch, Susan, Waubant, Emmanuelle

“…Abstract We explored the association between baseline gut microbiota (16S rRNA biomarker sequencing of stool samples) in 17 relapsing-remitting pediatric MS…”
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Structure and evolution of a proviral locus of Glyptapanteles indiensis bracovirus by Desjardins, Christopher A, Gundersen-Rindal, Dawn E, Hostetler, Jessica B, Tallon, Luke J, Fuester, Roger W, Schatz, Michael C, Pedroni, Monica J, Fadrosh, Douglas W, Haas, Brian J, Toms, Bradley S, Chen, Dan, Nene, Vishvanath

“…Bracoviruses (BVs), a group of double-stranded DNA viruses with segmented genomes, are mutualistic endosymbionts of parasitoid wasps. Virus particles are…”
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Sequencing Bacillus anthracis Typing Phages Gamma and Cherry Reveals a Common Ancestry by FOUTS, Derrick E, RASKO, David A, FADROSH, Douglas W, READ, Timothy D, GILL, Steven R, CER, Regina Z, LINGXIA JIANG, FEDOROVA, Nadia B, SHVARTSBEYN, Alla, VAMATHEVAN, Jessica J, TALLON, Luke, ALTHOFF, Ryan, ARBOGAST, Tamara S

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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