Search Results - "FLORES, RAPHAEL"

Reconciling the evolutionary origin of bread wheat (Triticum aestivum) by El Baidouri, Moaine, Murat, Florent, Veyssiere, Maeva, Molinier, Mélanie, Flores, Raphael, Burlot, Laura, Alaux, Michael, Quesneville, Hadi, Pont, Caroline, Salse, Jérôme

“…The origin of bread wheat (Triticum aestivum; AABBDD) has been a subject of controversy and of intense debate in the scientific community over the last few…”
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Combined Genomic and Genetic Data Integration of Major Agronomical Traits in Bread Wheat ( Triticum aestivum L.) by Quraishi, Umar M, Pont, Caroline, Ain, Qurat-Ul, Flores, Raphael, Burlot, Laura, Alaux, Michael, Quesneville, Hadi, Salse, Jerome

“…The high resolution integration of bread wheat genetic and genomic resources accumulated during the last decades offers the opportunity to unveil candidate…”
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Determination of Photosensitizing Potential of Lapachol for Photodynamic Inactivation of Bacteria by Lima, Regiane G, Flores, Raphael S, Miessi, Gabriella, Pulcherio, Jhoenne H. V, Aguilera, Laís F, Araujo, Leandro O, Oliveira, Samuel L, Caires, Anderson R. L

“…Antimicrobial photodynamic inactivation (aPDI) offers a promising alternative to combat drug-resistant bacteria. This study explores the potential of lapachol,…”
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Development of a knowledge graph framework to ease and empower translational approaches in plant research: a use-case on grain legumes by Imbert, Baptiste, Kreplak, Jonathan, Flores, Raphaël-Gauthier, Aubert, Grégoire, Burstin, Judith, Tayeh, Nadim

“…While the continuing decline in genotyping and sequencing costs has largely benefited plant research, some key species for meeting the challenges of…”
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Wheat syntenome unveils new evidences of contrasted evolutionary plasticity between paleo‐ and neoduplicated subgenomes by Pont, Caroline, Murat, Florent, Guizard, Sébastien, Flores, Raphael, Foucrier, Séverine, Bidet, Yannick, Quraishi, Umar Masood, Alaux, Michael, Doležel, Jaroslav, Fahima, Tzion, Budak, Hikmet, Keller, Beat, Salvi, Silvio, Maccaferri, Marco, Steinbach, Delphine, Feuillet, Catherine, Quesneville, Hadi, Salse, Jérôme

“…Summary Bread wheat derives from a grass ancestor structured in seven protochromosomes followed by a paleotetraploidization to reach a 12 chromosomes…”
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Management and dissemination of MS proteomic data with PROTICdb: Example of a quantitative comparison between methods of protein extraction by Langella, Olivier, Valot, Benoît, Jacob, Daniel, Balliau, Thierry, Flores, Raphaël, Hoogland, Christine, Joets, Johann, Zivy, Michel

“…High throughput MS‐based proteomic experiments generate large volumes of complex data and necessitate bioinformatics tools to facilitate their handling. Needs…”
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Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data by Alaux, Michael, Rogers, Jane, Letellier, Thomas, Flores, Raphaël, Alfama, Françoise, Pommier, Cyril, Mohellibi, Nacer, Durand, Sophie, Kimmel, Erik, Michotey, Célia, Guerche, Claire, Loaec, Mikaël, Lainé, Mathilde, Steinbach, Delphine, Choulet, Frédéric, Rimbert, Hélène, Leroy, Philippe, Guilhot, Nicolas, Salse, Jérôme, Feuillet, Catherine, Paux, Etienne, Eversole, Kellye, Adam-Blondon, Anne-Françoise, Quesneville, Hadi

“…The Wheat@URGI portal has been developed to provide the international community of researchers and breeders with access to the bread wheat reference genome…”
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transPLANT Resources for Triticeae Genomic Data by Spannagl, Manuel, Alaux, Michael, Lange, Matthias, Bolser, Daniel M., Bader, Kai C., Letellier, Thomas, Kimmel, Erik, Flores, Raphael, Pommier, Cyril, Kerhornou, Arnaud, Walts, Brandon, Nussbaumer, Thomas, Grabmuller, Christoph, Chen, Jinbo, Colmsee, Christian, Beier, Sebastian, Mascher, Martin, Schmutzer, Thomas, Arend, Daniel, Thanki, Anil, Ramirez‐Gonzalez, Ricardo, Ayling, Martin, Ayling, Sarah, Caccamo, Mario, Mayer, Klaus F.X., Scholz, Uwe, Steinbach, Delphine, Quesneville, Hadi, Kersey, Paul J.

“…The genome sequences of many important Triticeae species, including bread wheat (Triticum aestivum L.) and barley (Hordeum vulgare L.), remained…”
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The transcriptional landscape of polyploid wheat by Ramírez-González, R H, Borrill, P, Lang, D, Harrington, S A, Brinton, J, Venturini, L, Davey, M, Jacobs, J, van Ex, F, Pasha, A, Khedikar, Y, Robinson, S J, Cory, A T, Florio, T, Concia, L, Juery, C, Schoonbeek, H, Steuernagel, B, Xiang, D, Ridout, C J, Chalhoub, B, Mayer, K F X, Benhamed, M, Latrasse, D, Bendahmane, A, Wulff, B B H, Appels, R, Tiwari, V, Datla, R, Choulet, F, Pozniak, C J, Provart, N J, Sharpe, A G, Paux, E, Spannagl, M, Bräutigam, A, Uauy, C

“…The coordinated expression of highly related homoeologous genes in polyploid species underlies the phenotypes of many of the world's major crops. Here we…”
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GnpIS: an information system to integrate genetic and genomic data from plants and fungi by Steinbach, Delphine, Alaux, Michael, Amselem, Joelle, Choisne, Nathalie, Durand, Sophie, Flores, Raphaël, Keliet, Aminah-Olivia, Kimmel, Erik, Lapalu, Nicolas, Luyten, Isabelle, Michotey, Célia, Mohellibi, Nacer, Pommier, Cyril, Reboux, Sébastien, Valdenaire, Dorothée, Verdelet, Daphné, Quesneville, Hadi

“…Data integration is a key challenge for modern bioinformatics. It aims to provide biologists with tools to explore relevant data produced by different studies…”
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Shared subgenome dominance following polyploidization explains grass genome evolutionary plasticity from a seven protochromosome ancestor with 16K protogenes by Murat, Florent, Zhang, Rongzhi, Guizard, Sébastien, Flores, Raphael, Armero, Alix, Pont, Caroline, Steinbach, Delphine, Quesneville, Hadi, Cooke, Richard, Salse, Jerome

“…Modern plant genomes are diploidized paleopolyploids. We revisited grass genome paleohistory in response to the diploidization process through a detailed…”
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Karyotype and gene order evolution from reconstructed extinct ancestors highlight contrasts in genome plasticity of modern rosid crops by Murat, Florent, Zhang, Rongzhi, Guizard, Sébastien, Gavranović, Haris, Flores, Raphael, Steinbach, Delphine, Quesneville, Hadi, Tannier, Eric, Salse, Jérôme

“…We used nine complete genome sequences, from grape, poplar, Arabidopsis, soybean, lotus, apple, strawberry, cacao, and papaya, to investigate the paleohistory…”
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SyntenyViewer: a comparative genomics-driven translational research tool by Flores, Raphael, Huneau, Cécile, Burlot, Laura, Lainé, Mathilde, Kimmel, Erik, Pommier, Cyril, Alaux, Michael, Adam-Blondon, Anne-Françoise, Pont, Caroline, Quesneville, Hadi, Salse, Jerome

“…Abstract SyntenyViewer is a public web-based tool relying on a relational database available at https://urgi.versailles.inrae.fr/synteny delivering comparative…”
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Karyotype and Gene Order Evolution from ReconstructedExtinct Ancestors Highlight Contrasts in Genome Plasticity ofModern Rosid Crops by Murat, Florent, Zhang, Rongzhi R., Guizard, Sébastien, Gavranovic, Haris, Flores, Raphael, Steinbach, Delphine, Quesneville, Hadi, Tannier, Eric, Salse, Jérôme

“…We used nine complete genome sequences, from grape, poplar, Arabidopsis, soybean, lotus, apple, strawberry, cacao, and papaya, to investigate the paleohistory…”
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Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS by Pommier, C, Michotey, C, Cornut, G, Roumet, P, Duchêne, E, Flores, R, Lebreton, A, Alaux, M, Durand, S, Kimmel, E, Letellier, T, Merceron, G, Laine, M, Guerche, C, Loaec, M, Steinbach, D, Laporte, M A, Arnaud, E, Quesneville, H, Adam-Blondon, A F

“…GnpIS is a data repository for plant phenomics that stores whole field and greenhouse experimental data including environment measures. It allows long-term…”
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Distance education with tutoring improves diarrhea case management in Guatemala by FLORES, RAPHAEL, ROBLES, JUNIO, BURKHALTER, BARTON R.

“…Objective. To evaluate the impact of distance education in diarrhea and cholera case management on the quality of physicians’ and nurses’ practice. Design. The…”
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Shared sub-genome dominance following polyploidization explains grass genome evolutionary plasticity from a 7 protochromosome ancestor with 16K protogenes by Murat, Florent, Zhang, Rongzhi R., Guizard, Sébastien S., Flores, Raphaël-Gauthier R.-G., Armero Villanueva, Alix A., Pont, Caroline C., Steinbach, Delphine D., Quesneville, Hadi H., Cooke, Richard R., Salse, Jerome J.

“…Modern plant genomes are diploidized paleopolyploids. We revisited grass genome paleohistory in response to the diploidization process through a detailed…”
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Mining Plant Genomic and Genetic Data Using the GnpIS Information System by Adam-Blondon, A-F, Alaux, M, Durand, S, Letellier, T, Merceron, G, Mohellibi, N, Pommier, C, Steinbach, D, Alfama, F, Amselem, J, Charruaud, D, Choisne, N, Flores, R, Guerche, C, Jamilloux, V, Kimmel, E, Lapalu, N, Loaec, M, Michotey, C, Quesneville, H

“…GnpIS is an information system designed to help scientists working on plants and fungi to decipher the molecular and genetic architecture of trait variations…”
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