Search Results - "Estabrook, R. August"
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Specific and sensitive detection of nucleic acids and RNases using gold nanoparticle-RNA-fluorescent dye conjugates
Published in Chemical communications (Cambridge, England) (01-01-2007)“…Gold nanoparticles were modified with RNA and utilized to detect specific DNA sequences and various RNA nucleases…”
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Journal Article -
2
Observing an Induced-fit Mechanism during Sequence-specific DNA Methylation
Published in The Journal of biological chemistry (01-12-2006)“…The characterization of conformational changes that drive induced-fit mechanisms and their quantitative importance to enzyme specificity are essential for a…”
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Journal Article -
3
Coupling Sequence-specific Recognition to DNA Modification
Published in The Journal of biological chemistry (21-08-2009)“…Enzymes that modify DNA are faced with significant challenges in specificity for both substrate binding and catalysis. We describe how single hydrogen bonds…”
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Journal Article -
4
Statistical Coevolution Analysis and Molecular Dynamics: Identification of Amino Acid Pairs Essential for Catalysis
Published in Proceedings of the National Academy of Sciences - PNAS (25-01-2005)“…Molecular dynamics (MD) simulations of Hhal DNA methyltransferase and statistical coupling analysis (SCA) data on the DNA cytosine methyltransferase family…”
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Journal Article -
5
Functional Characterization of Escherichia coli DNA Adenine Methyltransferase, a Novel Target for Antibiotics
Published in The Journal of biological chemistry (10-12-2004)“…We have characterized Escherichia coli DNA adenine methyltransferase, a critical regulator of bacterial virulence. Steady-state kinetics, product inhibition,…”
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Journal Article -
6
The coupling of tight DNA binding and base flipping: identification of a conserved structural motif in base flipping enzymes
Published in The Journal of biological chemistry (23-07-2004)“…Val(121) is positioned immediately above the extrahelical cytosine in HhaI DNA C(5)-cytosine methyltransferase, and replacement with alanine dramatically…”
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Journal Article -
7
Molecular Scale Architecture: Engineered Three- And Four-Way Junctions
Published in Bioconjugate chemistry (01-02-2008)“…Biomolecular self-assembly provides a basis for the bottom-up construction of useful and diverse nanoscale architectures. DNA is commonly used to create these…”
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Journal Article -
8
Gold Nanoparticle Decoration of DNA on Silicon
Published in Langmuir (08-11-2005)“…Electrostatic assembly of cationic nanoparticles onto the negatively charged backbone of double-stranded DNA has been shown to produce one-dimensional chains…”
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Journal Article -
9
The Coupling of Tight DNA Binding and Base Flipping
Published in The Journal of biological chemistry (23-07-2004)“…Val 121 is positioned immediately above the extrahelical cytosine in HhaI DNA C 5 -cytosine methyltransferase, and replacement with alanine dramatically…”
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Journal Article -
10
Dynamic aspects of DNA methylation in M.HhaI
Published 01-01-2007“…DNA methylation is ubiquitous and essential to life. In order to further our understanding of DNA methylation, facilitate drug discovery, and to elucidate…”
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Dissertation -
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Dynamic aspects of DNA methylation in M.HhaI
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Dissertation