Search Results - "Escobedo, Nahuel"

MobiDB: intrinsically disordered proteins in 2021 by Piovesan, Damiano, Necci, Marco, Escobedo, Nahuel, Monzon, Alexander Miguel, Hatos, András, Mičetić, Ivan, Quaglia, Federica, Paladin, Lisanna, Ramasamy, Pathmanaban, Dosztányi, Zsuzsanna, Vranken, Wim F, Davey, Norman E, Parisi, Gustavo, Fuxreiter, Monika, Tosatto, Silvio C E

“…Abstract The MobiDB database (URL: https://mobidb.org/) provides predictions and annotations for intrinsically disordered proteins. Here, we report recent…”
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Impact of protein conformational diversity on AlphaFold predictions by Saldaño, Tadeo, Escobedo, Nahuel, Marchetti, Julia, Zea, Diego Javier, Mac Donagh, Juan, Velez Rueda, Ana Julia, Gonik, Eduardo, García Melani, Agustina, Novomisky Nechcoff, Julieta, Salas, Martín N, Peters, Tomás, Demitroff, Nicolás, Fernandez Alberti, Sebastian, Palopoli, Nicolas, Fornasari, Maria Silvina, Parisi, Gustavo

“…After the outstanding breakthrough of AlphaFold in predicting protein 3D models, new questions appeared and remain unanswered. The ensemble nature of proteins,…”
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Impact of protein conformational diversity on AlphaFold predictions by Saldaño, Tadeo, Escobedo, Nahuel, Marchetti, Julia, Zea, Diego Javier, Mac Donagh, Juan, Velez Rueda, Ana Julia, Gonik, Eduardo, García Melani, Agustina, Novomisky Nechcoff, Julieta, Salas, Martín N, Peters, Tomás, Demitroff, Nicolás, Fernandez Alberti, Sebastian, Palopoli, Nicolas, Fornasari, Maria Silvina, Parisi, Gustavo

“…Abstract Motivation After the outstanding breakthrough of AlphaFold in predicting protein 3D models, new questions appeared and remain unanswered. The ensemble…”
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Revealing Missing Protein–Ligand Interactions Using AlphaFold Predictions by Escobedo, Nahuel, Saldaño, Tadeo, Mac Donagh, Juan, Sawicki, Luciana Rodriguez, Palopoli, Nicolas, Alberti, Sebastian Fernandez, Fornasari, Maria Silvina, Parisi, Gustavo

“…[Display omitted] •AlphaFold2 is able to predict the presence of residues in disordered regions maintaining interactions with different ligands.•Residues…”
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CoDNaS-Q: a database of conformational diversity of the native state of proteins with quaternary structure by Escobedo, Nahuel, Tunque Cahui, Ronaldo Romario, Caruso, Gastón, García Ríos, Emilio, Hirsh, Layla, Monzon, Alexander Miguel, Parisi, Gustavo, Palopoli, Nicolas

“…Abstract Summary A collection of conformers that exist in a dynamical equilibrium defines the native state of a protein. The structural differences between…”
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Combining Protein Conformational Diversity and Phylogenetic Information Using CoDNaS and CoDNaS-Q by Escobedo, Nahuel, Monzon, Alexander Miguel, Fornasari, María Silvina, Palopoli, Nicolas, Parisi, Gustavo

“…CoDNaS (http://ufq.unq.edu.ar/codnas/) and CoDNaS-Q (http://ufq.unq.edu.ar/codnasq) are repositories of proteins with different degrees of conformational…”
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