Search Results - "Escobar‐Zepeda, Alejandra"

Metagenomic analysis and antibacterial activity of kefir microorganisms by González‐Orozco, Brianda D., García‐Cano, Israel, Escobar‐Zepeda, Alejandra, Jiménez‐Flores, Rafael, Álvarez, Valente B.

“…The microbiota composition of kefir grain and milk kefir was assessed via a metagenomic approach. Significant microorganisms were isolated and identified using…”
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Metagenomic analysis of a Mexican ripened cheese reveals a unique complex microbiota by Escobar-Zepeda, Alejandra, Sanchez-Flores, Alejandro, Quirasco Baruch, Maricarmen

“…Cotija cheese is a Mexican handcrafted product made from raw cow milk whose ripening process occurs spontaneously and, presumably, it is influenced by…”
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Strain-level characterization of broad host range mobile genetic elements transferring antibiotic resistance from the human microbiome by Forster, Samuel C., Liu, Junyan, Kumar, Nitin, Gulliver, Emily L., Gould, Jodee A., Escobar-Zepeda, Alejandra, Mkandawire, Tapoka, Pike, Lindsay J., Shao, Yan, Stares, Mark D., Browne, Hilary P., Neville, B. Anne, Lawley, Trevor D.

“…Mobile genetic elements (MGEs) carrying antibiotic resistance genes (ARGs) disseminate ARGs when they mobilise into new bacterial hosts. The nature of such…”
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Paenarthrobacter sp. GOM3 Is a Novel Marine Species With Monoaromatic Degradation Relevance by Rosas-Díaz, Jaime, Escobar-Zepeda, Alejandra, Adaya, Libertad, Rojas-Vargas, Jorge, Cuervo-Amaya, Diego Humberto, Sánchez-Reyes, Ayixon, Pardo-López, Liliana

“…Paenarthrobacter sp. GOM3, which is a strain that represents a new species-specific context within the genus Paenarthrobacter , is clearly a branched member…”
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Editorial: The Transition Era to New Sequencing Technologies and Their Application to Integrative Omics in Molecular Surveillance by Hölzer, Martin, Escobar-Zepeda, Alejandra, Linde, Jörg, Horn, Fabian

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Citrobacter amalonaticus Inhibits the Growth of Citrobacter rodentium in the Gut Lumen by Mullineaux-Sanders, Caroline, Carson, Danielle, Hopkins, Eve G D, Glegola-Madejska, Izabela, Escobar-Zepeda, Alejandra, Browne, Hilary P, Lawley, Trevor D, Frankel, Gad

“…The gut microbiota plays a crucial role in susceptibility to enteric pathogens, including Citrobacter rodentium, a model extracellular mouse pathogen that…”
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Bacterial Diversity and the Geochemical Landscape in the Southwestern Gulf of Mexico by Godoy-Lozano, E Ernestina, Escobar-Zepeda, Alejandra, Raggi, Luciana, Merino, Enrique, Gutierrez-Rios, Rosa Maria, Juarez, Katy, Segovia, Lorenzo, Licea-Navarro, Alexei Fedorovish, Gracia, Adolfo, Sanchez-Flores, Alejandro, Pardo-Lopez, Liliana

“…Marine sediments are an example of one of the most complex microbial habitats. These bacterial communities play an important role in several biogeochemical…”
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Definition of the Metagenomic Profile of Ocean Water Samples From the Gulf of Mexico Based on Comparison With Reference Samples From Sites Worldwide by Loza, Antonio, García-Guevara, Fernando, Segovia, Lorenzo, Escobar-Zepeda, Alejandra, Sanchez-Olmos, Maria Del Carmen, Merino, Enrique, Sanchez-Flores, Alejandro, Pardo-Lopez, Liliana, Juarez, Katy, Gutierrez-Rios, Rosa-Maria

“…Computational and statistical analysis of shotgun metagenomes can predict gene abundance and is helpful for elucidating the functional and taxonomic…”
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Metagenomic Profiling and Microbial Metabolic Potential of Perdido Fold Belt (NW) and Campeche Knolls (SE) in the Gulf of Mexico by Raggi, Luciana, García-Guevara, Fernando, Godoy-Lozano, E Ernestina, Martínez-Santana, Adrian, Escobar-Zepeda, Alejandra, Gutierrez-Rios, Rosa María, Loza, Antonio, Merino, Enrique, Sanchez-Flores, Alejandro, Licea-Navarro, Alexei, Pardo-Lopez, Liliana, Segovia, Lorenzo, Juarez, Katy

“…The Gulf of Mexico (GoM) is a particular environment that is continuously exposed to hydrocarbon compounds that may influence the microbial community…”
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Distinctive prokaryotic microbiomes in sympatric plant roots from a Yucatan cenote by Escobar-Zepeda, Alejandra, Rosas-Escobar, Patricia, Marquez Valdelamar, Laura, de la Torre, Patricia, Partida-Martinez, Laila P, Remegaldo, Ruben, Sanchez-Flores, Alejandro, Vergara, Fredd

“…Cenotes are flooded caves in Mexico's Yucatan peninsula. Many cenotes are interconnected in an underground network of pools and streams forming a vast…”
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How a holobiome perspective could promote intensification, biosecurity and eco-efficiency in the shrimp aquaculture industry by Gutiérrez-Pérez, Eric D., Vázquez-Juárez, Ricardo, Magallón-Barajas, Francisco J., Martínez-Mercado, Miguel Á., Escobar-Zepeda, Alejandra, Magallón-Servín, Paola

“…The aquaculture industry faces many challenges regarding the intensification of shrimp rearing systems. One of these challenges is the release of excessive…”
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Revisiting Microbial Diversity in Hypersaline Microbial Mats from Guerrero Negro for a Better Understanding of Methanogenic Archaeal Communities by García-Maldonado, José Q, Latisnere-Barragán, Hever, Escobar-Zepeda, Alejandra, Cadena, Santiago, Ramírez-Arenas, Patricia J, Vázquez-Juárez, Ricardo, Rojas-Contreras, Maurilia, López-Cortés, Alejandro

“…Knowledge regarding the diversity of methanogenic archaeal communities in hypersaline environments is limited because of the lack of efficient cultivation…”
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Evaluation of the bacterial diversity of Spanish-type chorizo during the ripening process using high-throughput sequencing and physicochemical characterization by Juárez-Castelán, Carmen, García-Cano, Israel, Escobar-Zepeda, Alejandra, Azaola-Espinosa, Alejandro, Álvarez-Cisneros, Yenizey, Ponce-Alquicira, Edith

“…Spanish-type chorizo is a fermented meat product that is highly appreciated by consumers. The physicochemical properties (pH, water activity (aw), total…”
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MGnify: the microbiome sequence data analysis resource in 2023 by Richardson, Lorna, Allen, Ben, Baldi, Germana, Beracochea, Martin, Bileschi, Maxwell L, Burdett, Tony, Burgin, Josephine, Caballero-Pérez, Juan, Cochrane, Guy, Colwell, Lucy J, Curtis, Tom, Escobar-Zepeda, Alejandra, Gurbich, Tatiana A, Kale, Varsha, Korobeynikov, Anton, Raj, Shriya, Rogers, Alexander B, Sakharova, Ekaterina, Sanchez, Santiago, Wilkinson, Darren J, Finn, Robert D

“…The MGnify platform (https://www.ebi.ac.uk/metagenomics) facilitates the assembly, analysis and archiving of microbiome-derived nucleic acid sequences. The…”
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The Road to Metagenomics: From Microbiology to DNA Sequencing Technologies and Bioinformatics by Escobar-Zepeda, Alejandra, Vera-Ponce de León, Arturo, Sanchez-Flores, Alejandro

“…The study of microorganisms that pervade each and every part of this planet has encountered many challenges through time such as the discovery of unknown…”
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Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics by Escobar-Zepeda, Alejandra, Godoy-Lozano, Elizabeth Ernestina, Raggi, Luciana, Segovia, Lorenzo, Merino, Enrique, Gutiérrez-Rios, Rosa María, Juarez, Katy, Licea-Navarro, Alexei F., Pardo-Lopez, Liliana, Sanchez-Flores, Alejandro

“…Metagenomics research has recently thrived due to DNA sequencing technologies improvement, driving the emergence of new analysis tools and the growth of…”
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Analysing the dynamics of the bacterial community in pozol, a Mexican fermented corn dough by López-Sánchez, Rafael, Hernández-Oaxaca, Diana, Escobar-Zepeda, Alejandra, Ramos Cerrillo, Blanca, López-Munguía, Agustin, Segovia, Lorenzo

“…Pozol is a traditional prehispanic Mexican beverage made from fermented nixtamal dough; it is still part of everyday life in many communities due to its…”
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Effects of extruded aquafeed on growth performance and gut microbiome of juvenile Totoaba macdonaldi by Barreto-Curiel, Fernando, Ramirez-Puebla, Shamayim Tabita, Ringø, Einar, Escobar-Zepeda, Alejandra, Godoy-Lozano, Ernestina, Vazquez-Duhalt, Rafael, Sanchez-Flores, Alejandro, Viana, María Teresa

“…•Extrusion technology results in a better carbohydrate utilization such as protein sparing effect.•Carbohydrate-free diets induced a higher microbial…”
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Author Correction: Analysis of sequencing strategies and tools for taxonomic annotation: Defining standards for progressive metagenomics by Escobar-Zepeda, Alejandra, Godoy-Lozano, Elizabeth Ernestina, Raggi, Luciana, Segovia, Lorenzo, Merino, Enrique, Gutiérrez-Rios, Rosa María, Juarez, Katy, Licea-Navarro, Alexei F., Pardo-Lopez, Liliana, Sanchez-Flores, Alejandro

“…An amendment to this paper has been published and can be accessed via a link at the top of the paper…”
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Bacterial and archaeal profiling of hypersaline microbial mats and endoevaporites, under natural conditions and methanogenic microcosm experiments by García-Maldonado, José Q., Escobar-Zepeda, Alejandra, Raggi, Luciana, Bebout, Brad M., Sanchez-Flores, Alejandro, López-Cortés, Alejandro

“…Bacterial and archaeal community structure of five microbial communities, developing at different salinities in Baja California Sur, Mexico, were characterized…”
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