Search Results - "Erzan, Ayşe"
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Call to save science institute in Turkey
Published in Nature (London) (01-09-2011)Get full text
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ensemble approach to the evolution of complex systems
Published in Journal of biosciences (01-04-2014)“…Adaptive systems frequently incorporate complex structures which can arise spontaneously and which may be non-adaptive in the evolutionary sense. We give…”
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The information coded in the yeast response elements accounts for most of the topological properties of its transcriptional regulation network
Published in PloS one (06-06-2007)“…The regulation of gene expression in a cell relies to a major extent on transcription factors, proteins which recognize and bind the DNA at specific binding…”
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Tracking tumor evolution via prostate-specific antigen: an individual post-operative study
Published in Theoretical biology and medical modelling (30-07-2010)“…The progress of the prostate-specific antigen (PSA) level after radical prostatectomy is observed for a patient in order to extract information about the mode…”
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Information content based model for the topological properties of the gene regulatory network of Escherichia coli
Published in Journal of theoretical biology (07-04-2010)“…Gene regulatory networks (GRN) are being studied with increasingly precise quantitative tools and can provide a testing ground for ideas regarding the…”
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Content-based network model with duplication and divergence
Published in Physica A (15-06-2006)“…We construct a minimal content-based realization of the duplication and divergence model of genomic networks introduced by Wagner [Proc. Natl. Acad. Sci. 91…”
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Evolutionary Route to Diploidy and Sex
Published in Proceedings of the National Academy of Sciences - PNAS (20-11-2001)“…By using a bit-string model of evolution, we find a successful route to diploidy and sex in simple organisms. Allowing the sexually reproducing diploid…”
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Motif statistics of artificially evolved and biological networks
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-06-2014)“…Topological features of gene regulatory networks can be successfully reproduced by a model population evolving under selection for short dynamical attractors…”
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Equilibrium correlations in a model for multidimensional epistasis
Published in Theory in biosciences = Theorie in den Biowissenschaften (01-03-2003)“…SummaryWe investigate a statistical model for multidimensional epistasis. The genotype is devided into subsequences, and within each subsequence mutations…”
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Novel position-space renormalization group for bond directed percolation in two dimensions
Published in Physica A (01-03-1999)“…A new position-space renormalization group approach is investigated for bond directed percolation in two dimensions. The threshold value for the bond…”
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Government cuts: Call to save science institute in Turkey
Published in Nature (London) (31-08-2011)Get full text
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Spectral renormalization group for the Gaussian model and ψ 4 theory on nonspatial networks
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-08-2015)Get full text
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Finite q-differences and the discrete renormalization group
Published in Physics letters. A (03-02-1997)“…The finite q-difference operator lends itself naturally to describing systems with exact discrete dilatation symmetry, such as hierarchical lattices. We…”
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Spectral renormalization group for the Gaussian model and ψ4 theory on nonspatial networks
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-08-2015)“…We implement the spectral renormalization group on different deterministic nonspatial networks without translational invariance. We calculate the thermodynamic…”
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Strategies for the evolution of sex
Published in Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics (01-12-2001)“…We find that the hypothesis made by Jan, Stauffer, and Moseley [Theory Biosci. 119, 166 (2000)] for the evolution of sex, namely, a strategy devised to escape…”
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Explicit construction of the eigenvectors and eigenvalues of the graph Laplacian on the Cayley tree
Published 04-06-2018“…Linear Algebra and its Applications 586 (2020) 111-129 A generalized Fourier analysis on arbitrary graphs calls for a detailed knowledge of the eigenvectors of…”
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Guerra, terrorismo ambiental y la necesidad de solidaridad con Irak
Published in Nómadas (Bogotá, Colombia) (2006)“…El Tribunal Mundial sobre Irak, que llevó a cabo sus últimas audiencias en Estambul en junio de 2005, halló culpables a los Estados Unidos y a la “Coalición de…”
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Metanetworks of artificially evolved regulatory networks
Published 19-06-2015“…We study metanetworks arising in genotype and phenotype spaces, in the context of a model population of Boolean graphs evolved under selection for short…”
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q -analysis of Fractal Sets
Published in Physical review letters (28-04-1997)Get full text
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