Search Results - "Ermakova, Yulia G"

Fluorescent ratiometric pH indicator SypHer2: Applications in neuroscience and regenerative biology by Matlashov, Mikhail E., Bogdanova, Yulia A., Ermakova, Galina V., Mishina, Natalia M., Ermakova, Yulia G., Nikitin, Evgeny S., Balaban, Pavel M., Okabe, Shigeo, Lukyanov, Sergey, Enikolopov, Grigori, Zaraisky, Andrey G., Belousov, Vsevolod V.

“…SypHer is a genetically encoded fluorescent pH-indicator with a ratiometric readout, suitable for measuring fast intracellular pH shifts. However, the…”
Get full text

Thermogenetic neurostimulation with single-cell resolution by Ermakova, Yulia G., Lanin, Aleksandr A., Fedotov, Ilya V., Roshchin, Matvey, Kelmanson, Ilya V., Kulik, Dmitry, Bogdanova, Yulia A., Shokhina, Arina G., Bilan, Dmitry S., Staroverov, Dmitry B., Balaban, Pavel M., Fedotov, Andrei B., Sidorov-Biryukov, Dmitry A., Nikitin, Evgeny S., Zheltikov, Aleksei M., Belousov, Vsevolod V.

“…Thermogenetics is a promising innovative neurostimulation technique, which enables robust activation of neurons using thermosensitive transient receptor…”
Get full text

Slowly Reducible Genetically Encoded Green Fluorescent Indicator for In Vivo and Ex Vivo Visualization of Hydrogen Peroxide by Subach, Oksana M, Kunitsyna, Tatiana A, Mineyeva, Olga A, Lazutkin, Alexander A, Bezryadnov, Dmitri V, Barykina, Natalia V, Piatkevich, Kiryl D, Ermakova, Yulia G, Bilan, Dmitry S, Belousov, Vsevolod V, Anokhin, Konstantin V, Enikolopov, Grigori N, Subach, Fedor V

“…Hydrogen peroxide (H O ) plays an important role in modulating cell signaling and homeostasis in live organisms. The HyPer family of genetically encoded…”
Get full text

Red fluorescent redox-sensitive biosensor Grx1-roCherry by Shokhina, Arina G, Kostyuk, Alexander I, Ermakova, Yulia G, Panova, Anastasiya S, Staroverov, Dmitry B, Egorov, Evgeny S, Baranov, Mikhail S, van Belle, Gijsbert J, Katschinski, Dörthe M, Belousov, Vsevolod V, Bilan, Dmitry S

“…Redox-sensitive fluorescent proteins (roFPs) are a powerful tool for imaging intracellular redox changes. The structure of these proteins contains a pair of…”
Get full text

Ultrasensitive Genetically Encoded Indicator for Hydrogen Peroxide Identifies Roles for the Oxidant in Cell Migration and Mitochondrial Function by Pak, Valeriy V., Ezeriņa, Daria, Lyublinskaya, Olga G., Pedre, Brandán, Tyurin-Kuzmin, Pyotr A., Mishina, Natalie M., Thauvin, Marion, Young, David, Wahni, Khadija, Martínez Gache, Santiago Agustín, Demidovich, Alexandra D., Ermakova, Yulia G., Maslova, Yulia D., Shokhina, Arina G., Eroglu, Emrah, Bilan, Dmitry S., Bogeski, Ivan, Michel, Thomas, Vriz, Sophie, Messens, Joris, Belousov, Vsevolod V.

“…Hydrogen peroxide (H2O2) is a key redox intermediate generated within cells. Existing probes for H2O2 have not solved the problem of detection of the ultra-low…”
Get full text

Red fluorescent genetically encoded indicator for intracellular hydrogen peroxide by Ermakova, Yulia G., Bilan, Dmitry S., Matlashov, Mikhail E., Mishina, Natalia M., Markvicheva, Ksenia N., Subach, Oksana M., Subach, Fedor V., Bogeski, Ivan, Hoth, Markus, Enikolopov, Grigori, Belousov, Vsevolod V.

“…Reactive oxygen species (ROS) are conserved regulators of numerous cellular functions, and overproduction of ROS is a hallmark of various pathological…”
Get full text

HyPer-3: A Genetically Encoded H2O2 Probe with Improved Performance for Ratiometric and Fluorescence Lifetime Imaging by Bilan, Dmitry S, Pase, Luke, Joosen, Linda, Gorokhovatsky, Andrey Yu, Ermakova, Yulia G, Gadella, Theodorus W. J, Grabher, Clemens, Schultz, Carsten, Lukyanov, Sergey, Belousov, Vsevolod V

“…High-performance sensors for reactive oxygen species are instrumental to monitor dynamic events in cells and organisms. Here, we present HyPer-3, a genetically…”
Get full text

Pyridinium Analogues of Green Fluorescent Protein Chromophore: Fluorogenic Dyes with Large Solvent-Dependent Stokes Shift by Ermakova, Yulia G, Sen, Tirthendu, Bogdanova, Yulia A, Smirnov, Alexander Yu, Baleeva, Nadezhda S, Krylov, Anna I, Baranov, Mikhail S

“…Novel fluorogenic dyes based on the GFP chromophore are developed. The compounds contain a pyridinium ring instead of phenolate and feature large Stokes shifts…”
Get full text

Visualization of Intracellular Hydrogen Peroxide with the Genetically Encoded Fluorescent Probe HyPer in NIH-3T3 Cells by Ermakova, Yulia G, Mishina, Nataliya M, Schultz, Carsten, Belousov, Vsevolod V

“…Reactive oxygen species (ROS) are involved in regulating normal physiological cell functions as second messengers as well as nonspecific damage of biomolecules…”
Get more information

Human TRPV1 is an efficient thermogenetic actuator for chronic neuromodulation by Maltsev, Dmitry I., Solotenkov, Maxim A., Mukhametshina, Liana F., Sokolov, Rostislav A., Solius, Georgy M., Jappy, David, Tsopina, Aleksandra S., Fedotov, Ilya V., Lanin, Aleksandr A., Fedotov, Andrei B., Krut’, Viktoriya G., Ermakova, Yulia G., Moshchenko, Aleksandr A., Rozov, Andrei, Zheltikov, Aleksei M., Podgorny, Oleg V., Belousov, Vsevolod V.

“…Thermogenetics is a promising neuromodulation technique based on the use of heat-sensitive ion channels. However, on the way to its clinical application, a…”
Get full text

The ‘mitoflash’ probe cpYFP does not respond to superoxide by Schwarzländer, Markus, Wagner, Stephan, Ermakova, Yulia G., Belousov, Vsevolod V., Radi, Rafael, Beckman, Joseph S., Buettner, Garry R., Demaurex, Nicolas, Duchen, Michael R., Forman, Henry J., Fricker, Mark D., Gems, David, Halestrap, Andrew P., Halliwell, Barry, Jakob, Ursula, Johnston, Iain G., Jones, Nick S., Logan, David C., Morgan, Bruce, Müller, Florian L., Nicholls, David G., Remington, S. James, Schumacker, Paul T., Winterbourn, Christine C., Sweetlove, Lee J., Meyer, Andreas J., Dick, Tobias P., Murphy, Michael P.

“…Arising from E.-Z. Shen et al. Nature508, 128–132 (2014); doi:10.1038/nature1301210.1038/nature13012 Ageing and lifespan of organisms are determined by…”
Get full text

Pyridine analogue of fluorescent protein chromophore: Fluorogenic dye suitable for mitochondria staining by Ermakova, Yulia G., Bogdanova, Yulia A., Baleeva, Nadezhda S., Zaitseva, Snizhana O., Guglya, Elena B., Smirnov, Alexander Yu, Zagudaylova, Marina B., Baranov, Mikhail S.

“…In this paper, we present a novel fluorogenic analogue of the GFP chromophore with atypical solvent-dependent variations of the fluorescence quantum yield…”
Get full text

Thermogenetic stimulation of single neocortical pyramidal neurons transfected with TRPV1-L channels by Roshchin, Matvey, Ermakova, Yulia G., Lanin, Aleksandr A., Chebotarev, Artem S., Kelmanson, Ilya V., Balaban, Pavel M., Zheltikov, Aleksei M., Belousov, Vsevolod V., Nikitin, Evgeny S.

“…•Functional TRPV1-L channels can be expressed in pyramidal cells of mouse neocortex using in utero electroporation.•IR (infrared) radiation induces membrane…”
Get full text

In vivo dynamics of acidosis and oxidative stress in the acute phase of an ischemic stroke in a rodent model by Kelmanson, Ilya V., Shokhina, Arina G., Kotova, Daria A., Pochechuev, Matvei S., Ivanova, Alexandra D., Kostyuk, Alexander I., Panova, Anastasiya S., Borodinova, Anastasia A., Solotenkov, Maxim A., Stepanov, Evgeny A., Raevskii, Roman I., Moshchenko, Aleksandr A., Pak, Valeriy V., Ermakova, Yulia G., van Belle, Gijsbert J.C., Tarabykin, Viktor, Balaban, Pavel M., Fedotov, Ilya V., Fedotov, Andrei B., Conrad, Marcus, Bogeski, Ivan, Katschinski, Dörthe M., Doeppner, Thorsten R., Bähr, Mathias, Zheltikov, Aleksei M., Belousov, Vsevolod V., Bilan, Dmitry S.

“…Ischemic cerebral stroke is one of the leading causes of death and disability in humans. However, molecular processes underlying the development of this…”
Get full text

Two‐ and three‐photon absorption cross‐section characterization for high‐brightness, cell‐specific multiphoton fluorescence brain imaging by Lanin, Aleksandr A., Chebotarev, Artem S., Pochechuev, Matvei S., Kelmanson, Ilya V., Kotova, Daria A., Bilan, Dmitry S., Ermakova, Yulia G., Fedotov, Andrei B., Ivanov, Anatoly A., Belousov, Vsevolod V., Zheltikov, Aleksei M.

“…We demonstrate an accurate quantitative characterization of absolute two‐ and three‐photon absorption (2PA and 3PA) action cross sections of a genetically…”
Get full text

The 'mitoflash' probe cpYFP does not respond to superoxide/Cheng et al. reply by Schwarzländer, Markus, Wagner, Stephan, Ermakova, Yulia G, Belousov, Vsevolod V, Radi, Rafael, Beckman, Joseph S, Buettner, Garry R, Demaurex, Nicolas, Duchen, Michael R, man, Henry J, Fricker, Mark D, Gems, David, Halestrap, Andrew P, Halliwell, Barry, Jakob, Ursula, Johnston, Iain G, Jones, Nick S, Logan, David C, Morgan, Bruce, Müller, Florian L, Nicholls, David G, Remington, S James, Schumacker, Paul T, Winterbourn, Christine C, Sweetlove, Lee J, Meyer, Andreas J, Dick, Tobias P, Murphy, Michael P, Cheng, Heping, Wang, Wang, Wang, Xianhua, Sheu, Shey-Shing, Dirksen, Robert T, Dong, Meng-Qiu

“…Exposure of cpYFP to a superoxide-generating system (xanthine (X) and xanthine oxidase (XO)) slightly changed the excitation and emission spectra.However, the…”
Get full text

HyPer-3: A Genetically Encoded H 2 O 2 Probe with Improved Performance for Ratiometric and Fluorescence Lifetime Imaging by Bilan, Dmitry S., Pase, Luke, Joosen, Linda, Gorokhovatsky, Andrey Yu, Ermakova, Yulia G., Gadella, Theodorus W. J., Grabher, Clemens, Schultz, Carsten, Lukyanov, Sergey, Belousov, Vsevolod V.

Get full text

HyPer-3: a genetically encoded H(2)O(2) probe with improved performance for ratiometric and fluorescence lifetime imaging by Bilan, Dmitry S, Pase, Luke, Joosen, Linda, Gorokhovatsky, Andrey Yu, Ermakova, Yulia G, Gadella, Theodorus W J, Grabher, Clemens, Schultz, Carsten, Lukyanov, Sergey, Belousov, Vsevolod V

“…High-performance sensors for reactive oxygen species are instrumental to monitor dynamic events in cells and organisms. Here, we present HyPer-3, a genetically…”
Get full text