Search Results - "Emerson, Daniel J"

Chromatin structure dynamics during the mitosis-to-G1 phase transition by Zhang, Haoyue, Emerson, Daniel J., Gilgenast, Thomas G., Titus, Katelyn R., Lan, Yemin, Huang, Peng, Zhang, Di, Wang, Hongxin, Keller, Cheryl A., Giardine, Belinda, Hardison, Ross C., Phillips-Cremins, Jennifer E., Blobel, Gerd A.

“…Features of higher-order chromatin organization—such as A/B compartments, topologically associating domains and chromatin loops—are temporarily disrupted…”
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Cohesin-mediated loop anchors confine the locations of human replication origins by Emerson, Daniel J., Zhao, Peiyao A., Cook, Ashley L., Barnett, R. Jordan, Klein, Kyle N., Saulebekova, Dalila, Ge, Chunmin, Zhou, Linda, Simandi, Zoltan, Minsk, Miriam K., Titus, Katelyn R., Wang, Weitao, Gong, Wanfeng, Zhang, Di, Yang, Liyan, Venev, Sergey V., Gibcus, Johan H., Yang, Hongbo, Sasaki, Takayo, Kanemaki, Masato T., Yue, Feng, Dekker, Job, Chen, Chun-Long, Gilbert, David M., Phillips-Cremins, Jennifer E.

“…DNA replication occurs through an intricately regulated series of molecular events and is fundamental for genome stability 1 , 2 . At present, it is unknown…”
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Exchange Often and Properly in Replica Exchange Molecular Dynamics by Sindhikara, Daniel J, Emerson, Daniel J, Roitberg, Adrian E

“…Previous work by us showed that in replica exchange molecular dynamics, exchanges should be attempted extremely often, providing gains in efficiency and no…”
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Disease-Associated Short Tandem Repeats Co-localize with Chromatin Domain Boundaries by Sun, James H., Zhou, Linda, Emerson, Daniel J., Phyo, Sai A., Titus, Katelyn R., Gong, Wanfeng, Gilgenast, Thomas G., Beagan, Jonathan A., Davidson, Beverly L., Tassone, Flora, Phillips-Cremins, Jennifer E.

“…More than 25 inherited human disorders are caused by the unstable expansion of repetitive DNA sequences termed short tandem repeats (STRs). A fundamental…”
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A Novel Fluorescent General Anesthetic Enables Imaging of Sites of Action In Vivo by EMERSON, Daniel J, ZHENGZHENG LIAO, ECKENHOFF, Roderic G, DMOCHOWSKI, Ivan J

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Detecting hierarchical genome folding with network modularity by Norton, Heidi K, Emerson, Daniel J, Huang, Harvey, Kim, Jesi, Titus, Katelyn R, Gu, Shi, Bassett, Danielle S, Phillips-Cremins, Jennifer E

“…3DNetMod identifies nested topologically associating domains (TADs) and subTADs from Hi-C data. Mammalian genomes are folded in a hierarchy of compartments,…”
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The BET Protein BRD2 Cooperates with CTCF to Enforce Transcriptional and Architectural Boundaries by Hsu, Sarah C., Gilgenast, Thomas G., Bartman, Caroline R., Edwards, Christopher R., Stonestrom, Aaron J., Huang, Peng, Emerson, Daniel J., Evans, Perry, Werner, Michael T., Keller, Cheryl A., Giardine, Belinda, Hardison, Ross C., Raj, Arjun, Phillips-Cremins, Jennifer E., Blobel, Gerd A.

“…Bromodomain and extraterminal motif (BET) proteins are pharmacologic targets for the treatment of diverse diseases, yet the roles of individual BET family…”
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Fluorescent Anesthetics by Emerson, Daniel J, Dmochowski, Ivan J

“…Methods for using exogenous fluorophore and general anesthetic 1-aminoanthracene (1-AMA) and its photoactive derivative 1-azidoanthracene (1-AZA) are provided…”
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A subset of topologically associating domains fold into mesoscale core-periphery networks by Huang, Harvey, Chen, Sunnia T., Titus, Katelyn R., Emerson, Daniel J., Bassett, Danielle S., Phillips-Cremins, Jennifer E.

“…Mammalian genomes are folded into a hierarchy of compartments, topologically associating domains (TADs), subTADs, and long-range looping interactions. The…”
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Direct Modulation of Microtubule Stability Contributes to Anthracene General Anesthesia by Emerson, Daniel J, Weiser, Brian P, Psonis, John, Liao, Zhengzheng, Taratula, Olena, Fiamengo, Ashley, Wang, Xiaozhao, Sugasawa, Keizo, Smith, Amos B, Eckenhoff, Roderic G, Dmochowski, Ivan J

“…Recently, we identified 1-aminoanthracene as a fluorescent general anesthetic. To investigate the mechanism of action, a photoactive analogue,…”
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Book of Note by Emerson, Daniel J., McEntee, John

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A new brand of politics by Emerson, Daniel J, Chatham, Jonathan, Mallon, Patrick

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