Search Results - "Ellström, Patrik"

Circumpolar diversification of the Ixodes uriae tick virome by Pettersson, John H.-O, Ellström, Patrik, Ling, Jiaxin, Nilsson, Ingela, Bergström, Sven, González-Acuña, Daniel, Olsen, Björn, Holmes, Edward C

“…Ticks (order: Ixodida) are a highly diverse and ecologically important group of ectoparasitic blood-feeding organisms. One such species, the seabird tick…”
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Assessing compatibility and viral fitness between poultry-adapted H9N2 and wild bird-derived neuraminidases by Wasberg, Anishia, Faria, Inês R., Bergholm, Julia, Petric, Philipp P., Mostafa, Ahmed, Pleschka, Stephan, Schwemmle, Martin, Lundkvist, Åke, Ellström, Patrik, Naguib, Mahmoud M.

“…Exchange of viral segments between one or more influenza virus subtypes can contribute to a shift in virulence and adaptation to new hosts. Among several…”
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Host ecology regulates interspecies recombination in bacteria of the genus Campylobacter by Mourkas, Evangelos, Yahara, Koji, Bayliss, Sion C, Calland, Jessica K, Johansson, Håkan, Mageiros, Leonardos, Muñoz-Ramirez, Zilia Y, Futcher, Grant, Méric, Guillaume, Hitchings, Matthew D, Sandoval-Motta, Santiago, Torres, Javier, Jolley, Keith A, Maiden, Martin C J, Ellström, Patrik, Waldenström, Jonas, Pascoe, Ben, Sheppard, Samuel K

“…Horizontal gene transfer (HGT) can allow traits that have evolved in one bacterial species to transfer to another. This has potential to rapidly promote new…”
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Genetic Variations among Different Variants of G1-like Avian Influenza H9N2 Viruses and Their Pathogenicity in Chickens by Adel, Amany, Abdelmagid, Marwa A, Mohamed, Ahmed Abd-Elhalem, Wasberg, Anishia, Mosaad, Zienab, Selim, Karim, Shaaban, Asmaa, Tarek, Mohamed, Hagag, Naglaa M, Lundkvist, Åke, Ellström, Patrik, Naguib, Mahmoud M

“…Since it was first discovered, the low pathogenic avian influenza (LPAI) H9N2 subtype has established linages infecting the poultry population globally and has…”
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Attachment Patterns of Human and Avian Influenza Viruses to Trachea and Colon of 26 Bird Species - Support for the Community Concept by Eriksson, Per, Lindskog, Cecilia, Lorente-Leal, Victor, Waldenström, Jonas, González-Acuna, Daniel, Järhult, Josef D, Lundkvist, Åke, Olsen, Björn, Jourdain, Elsa, Ellström, Patrik

“…Avian influenza A viruses (AIVs) have a broad host range, but are most intimately associated with waterfowl (Anseriformes) and, in the case of the H13 and H16…”
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The Potential of Isolation Source to Predict Colonization in Avian Hosts: A Case Study in Campylobacter jejuni Strains From Three Bird Species by Atterby, Clara, Mourkas, Evangelos, Méric, Guillaume, Pascoe, Ben, Wang, Helen, Waldenström, Jonas, Sheppard, Samuel K, Olsen, Björn, Järhult, Josef D, Ellström, Patrik

“…is the primary cause of bacterial gastroenteritis worldwide, infecting humans mostly through consumption of contaminated poultry. is common in the gut of wild…”
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Characterization of Campylobacter spp. isolated from wild birds in the Antarctic and Sub-Antarctic by Johansson, Håkan, Ellström, Patrik, Artursson, Karin, Berg, Charlotte, Bonnedahl, Jonas, Hansson, Ingrid, Hernandez, Jorge, Lopez-Martín, Juana, Medina-Vogel, Gonzalo, Moreno, Lucila, Olsen, Björn, Olsson Engvall, Eva, Skarin, Hanna, Troell, Karin, Waldenström, Jonas, Ågren, Joakim, González-Acuña, Daniel

“…A lack of knowledge of naturally occurring pathogens is limiting our ability to use the Antarctic to study the impact human-mediated introduction of infectious…”
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A Comparison of Host Responses to Infection with Wild-Type Avian Influenza Viruses in Chickens and Tufted Ducks by Naguib, Mahmoud M, Eriksson, Per, Jax, Elinor, Wille, Michelle, Lindskog, Cecilia, Bröjer, Caroline, Krambrich, Janina, Waldenström, Jonas, Kraus, Robert H S, Larson, Göran, Lundkvist, Åke, Olsen, Björn, Järhult, Josef D, Ellström, Patrik

“…Cross-species transmission of influenza A virus (IAV) from wild waterfowl to poultry is the first step in a chain of events that can ultimately lead to…”
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Avian influenza viruses at the wild-domestic bird interface in Egypt by Naguib, Mahmoud M., Verhagen, Josanne H., Samy, Ahmed, Eriksson, Per, Fife, Mark, Lundkvist, Åke, Ellström, Patrik, Järhult, Josef D.

“…Wild birds of the orders Anseriformes (mainly ducks, geese and swans) and Charadriiformes (mainly gulls, terns and waders) constitute the natural reservoir for…”
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A high-quality genome and comparison of short- versus long-read transcriptome of the palaearctic duck Aythya fuligula (tufted duck) by Mueller, Ralf C, Ellström, Patrik, Howe, Kerstin, Uliano-Silva, Marcela, Kuo, Richard I, Miedzinska, Katarzyna, Warr, Amanda, Fedrigo, Olivier, Haase, Bettina, Mountcastle, Jacquelyn, Chow, William, Torrance, James, Wood, Jonathan M D, Järhult, Josef D, Naguib, Mahmoud M, Olsen, Björn, Jarvis, Erich D, Smith, Jacqueline, Eöry, Lél, Kraus, Robert H S

“…Abstract Background The tufted duck is a non-model organism that experiences high mortality in highly pathogenic avian influenza outbreaks. It belongs to the…”
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Evaluation and optimization of microbial DNA extraction from fecal samples of wild Antarctic bird species by Eriksson, Per, Mourkas, Evangelos, González-Acuna, Daniel, Olsen, Björn, Ellström, Patrik

“…Introduction: Advances in the development of nucleic acid-based methods have dramatically facilitated studies of host-microbial interactions. Fecal DNA…”
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Comparison between RT droplet digital PCR and RT real-time PCR for quantification of noroviruses in oysters by Persson, Sofia, Eriksson, Ronnie, Lowther, James, Ellström, Patrik, Simonsson, Magnus

“…Oysters are frequently associated with norovirus outbreaks, but the presence of norovirus RNA in oysters does not necessarily imply a health risk to humans…”
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rprimer: an R/bioconductor package for design of degenerate oligos for sequence variable viruses by Persson, Sofia, Larsson, Christina, Simonsson, Magnus, Ellström, Patrik

“…Abstract Background This paper presents a new R/Bioconductor package, rprimer, for design of degenerate oligos and PCR assays for sequence variable viruses. A…”
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Host Range of Influenza A Virus H1 to H16 in Eurasian Ducks Based on Tissue and Receptor Binding Studies by Verhagen, Josanne H, Eriksson, Per, Leijten, Lonneke, Blixt, Ola, Olsen, Björn, Waldenström, Jonas, Ellström, Patrik, Kuiken, Thijs

“…Dabbling and diving ducks partly occupy shared habitats but have been reported to play different roles in wildlife infectious disease dynamics. Influenza A…”
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SARS-CoV-2 variants of concern and spike protein mutational dynamics in a Swedish cohort during 2021, studied by Nanopore sequencing by Mannsverk, Steinar, Bergholm, Julia, Palanisamy, Navaneethan, Ellström, Patrik, Kaden, René, Lindh, Johan, Lennerstrand, Johan

“…Since the beginning of the COVID-19 pandemic, new variants of significance to public health have emerged. Consequently, early detection of new mutations and…”
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No colonization resistance to Campylobacter jejuni in broilers fed brown algal extract-supplemented diets by Eliasson, Eliška, Sun, Li, Cervin, Gunnar, Pavia, Henrik, Tällberg, Gustav, Ellström, Patrik, Ivarsson, Emma

“…gastroenteritis is the most commonly reported zoonosis within the EU, with poultry products regarded as the primary source of transmission to humans…”
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Global patterns of avian influenza A (H7): virus evolution and zoonotic threats by Naguib, Mahmoud M, Verhagen, Josanne H, Mostafa, Ahmed, Wille, Michelle, Li, Ruiyun, Graaf, Annika, Järhult, Josef D, Ellström, Patrik, Zohari, Siamak, Lundkvist, Åke, Olsen, Björn

“…ABSTRACT Avian influenza viruses (AIVs) continue to impose a negative impact on animal and human health worldwide. In particular, the emergence of highly…”
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An oseltamivir-resistant avian H1N1 influenza A virus can transmit from mallards to chickens similarly to a wild-type strain: implications for the risk of resistance transmission to humans by Skog, Erik, Nykvist, Marie, Naguib, Mahmoud M, Wille, Michelle, Bröjer, Caroline, Agarwal, Viktoria, Ellström, Patrik, Westman, Gabriel, Lundkvist, Åke, Järhult, Josef D

“…The neuraminidase inhibitor (NAI) oseltamivir is stockpiled globally as part of influenza pandemic preparedness. However, oseltamivir carboxylate (OC)…”
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Proximity to humans is associated with antimicrobial-resistant enteric pathogens in wild bird microbiomes by Mourkas, Evangelos, Valdebenito, José O, Marsh, Hannah, Hitchings, Matthew D, Cooper, Kerry K, Parker, Craig T, Székely, Tamás, Johansson, Håkan, Ellström, Patrik, Pascoe, Ben, Waldenström, Jonas, Sheppard, Samuel K

“…Humans are radically altering global ecology, and one of the most apparent human-induced effects is urbanization, where high-density human habitats disrupt…”
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Susceptibility to Campylobacter infection is associated with the species composition of the human fecal microbiota by Dicksved, Johan, Ellström, Patrik, Engstrand, Lars, Rautelin, Hilpi

“…The gut microbiota is essential for human health, but very little is known about how the composition of this ecosystem can influence and respond to bacterial…”
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