Search Results - "Ejtehadi, M R"
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1
Fractal nematic colloids
Published in Nature communications (24-01-2017)“…Fractals are remarkable examples of self-similarity where a structure or dynamic pattern is repeated over multiple spatial or time scales. However, little is…”
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2
Different buckling regimes in direct electrospinning: A comparative approach to rope buckling
Published in Journal of polymer science. Part B, Polymer physics (15-02-2016)“…Understanding the dynamics of direct electrospinning is the key to control fiber morphologies that are critical for the development of new electrospinning…”
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3
Three-Body Interactions Improve the Prediction of Rate and Mechanism in Protein Folding Models
Published in Proceedings of the National Academy of Sciences - PNAS (19-10-2004)“…Here we study the effects of many-body interactions on rate and mechanism in protein folding by using the results of molecular dynamics simulations on numerous…”
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4
Contribution of nonlocal interactions to DNA elasticity
Published in The Journal of chemical physics (28-03-2011)“…A nonlocal harmonic elastic rod model is proposed to describe the elastic behavior of short DNA molecules. We show that the nonlocal interactions contribute to…”
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5
Understanding the nanoparticle–protein corona complexes using computational and experimental methods
Published in The international journal of biochemistry & cell biology (01-06-2016)“…Nanoparticles (NP) have capability to adsorb proteins from biological fluids and form protein layer, which is called protein corona. As the cell sees corona…”
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6
Electrically rotating suspended films of polar liquids
Published in Experiments in fluids (01-02-2011)“…Controlled rotation of a suspended soap water film, simply generated by applying an electric field, has been reported recently. The film rotates when the…”
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7
Rotational regimes of freely suspended liquid crystal films under electric current in presence of an external electric field
Published in Microfluidics and nanofluidics (01-07-2012)“…The electrohydrodynamic (EHD) vortices produced by an electric current in freely suspended liquid crystal (LC) films of N…”
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8
A liquid film motor
Published in Microfluidics and nanofluidics (01-05-2009)“…It is well known that electro-hydrodynamical effects in freely suspended liquid films can force liquids to flow. Here, we report a purely electrically driven…”
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9
Analytical first derivatives of the RE-squared interaction potential
Published in Journal of computational physics (01-12-2006)“…We derive exact expressions for the forces and torques between biaxial molecules interacting via the RE-squared potential, a recent variant of the Gay–Berne…”
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10
An exact treatment of ellipsoid-substrate interactions
Published in Europhysics letters (01-01-2007)“…We present an exact treatment of the pairwise surface interactions of biaxial ellipsoidal bodies and derive the exact explicit expressions for the…”
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11
Interaction potentials for soft and hard ellipsoids
Published in Physical review. E, Statistical physics, plasmas, fluids, and related interdisciplinary topics (01-04-2003)“…Using results from colloid science we derive interaction potentials for computer simulations of mixtures of soft or hard ellipsoids of arbitrary shape and…”
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12
Extreme bendability of DNA double helix due to bending asymmetry
Published in The Journal of chemical physics (14-09-2015)“…Experimental data of the DNA cyclization (J-factor) at short length scales exceed the theoretical expectation based on the wormlike chain (WLC) model by…”
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13
Protein folding rates correlate with heterogeneity of folding mechanism
Published in Physical review letters (12-11-2004)“…By observing trends in the folding kinetics of experimental 2-state proteins at their transition midpoints, and by observing trends in the barrier heights of…”
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14
Stretching an anisotropic DNA
Published in The Journal of chemical physics (28-03-2008)“…We present a perturbation theory to find the response of an anisotropic DNA to the external tension. It is shown that the anisotropy has a nonzero but small…”
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15
Rigid-body formalism for simulating macromolecules
Published in Computer physics communications (01-08-2002)“…In our work we aim at developing a model where macromolecules are represented on a mesoscopic level as an assembly of rigid bodies which interact via arbitrary…”
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Journal Article Conference Proceeding -
16
Gating and conduction of nano-channel forming proteins: a computational approach
Published in Journal of biomolecular structure & dynamics (01-08-2013)“…Monitoring conformational changes in ion channels is essential to understand their gating mechanism. Here, we explore the structural dynamics of four outer…”
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17
A history-dependent stochastic predator-prey model : Chaos and its elimination
Published in The European physical journal. B, Condensed matter physics (01-02-2000)Get full text
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18
Stiffer double-stranded DNA in two-dimensional confinement due to bending anisotropy
Published in Physical review. E (01-12-2016)“…Using analytical approach and Monte Carlo (MC) simulations, we study the elastic behavior of the intrinsically twisted elastic ribbons with bending anisotropy,…”
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19
Directed motion of C60 on a graphene sheet subjected to a temperature gradient
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-04-2011)“…Nonequilibrium molecular dynamics simulations are used to study the motion of a C(60) molecule on a graphene sheet subjected to a temperature gradient. The…”
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20
Definition of the persistence length in the coarse-grained models of DNA elasticity
Published in Physical review. E, Statistical, nonlinear, and soft matter physics (01-11-2012)“…By considering the detailed structure of DNA in the base pair level, two possible definitions of the persistence length are compared. One definition is related…”
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