Search Results - "E. F. Mongodin"

Analyzing Endodontic Infections by Deep Coverage Pyrosequencing by Li, L., Hsiao, W.W.L., Nandakumar, R., Barbuto, S.M., Mongodin, E.F., Paster, B.J., Fraser-Liggett, C.M., Fouad, A.F.

“…Bacterial diversity in endodontic infections has not been sufficiently studied. The use of modern pyrosequencing technology should allow for more comprehensive…”
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The Genome of Salinibacter ruber. Convergence and Gene Exchange among Hyperhalophilic Bacteria and Archaea by E. F. Mongodin, Nelson, K. E., Daugherty, S., DeBoy, R. T., J. Wister, Khouri, H., Weidman, J., D. A. Walsh, R. T. Papke, G. Sanchez Perez, Sharma, A. K., Nesbø, C. L., MacLeod, D., E. Bapteste, Doolittle, W. F., R. L. Charlebois, B. Legault, F. Rodriguez-Valera

“…Saturated thalassic brines are among the most physically demanding habitats on Earth: few microbes survive in them. Salinibacter ruber is among these organisms…”
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Evolution of catabolic pathways : Genomic insights into microbial s-triazine metabolism by SHAPIR, N, MONGODIN, E. F, SADOWSKY, M. J, DAUGHERTY, S. C, NELSON, K. E, WACKETT, L. P

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Immune status, and not HIV infection or exposure, drives the development of the oral microbiota by Coker, M. O., Mongodin, E. F., El-Kamary, S. S., Akhigbe, P., Obuekwe, O., Omoigberale, A., Langenberg, P., Enwonwu, C., Hittle, L., Blattner, W. A., Charurat, M.

“…Even with antiretroviral therapy, children born to HIV-infected (HI) mothers are at a higher risk of early-life infections and morbidities including dental…”
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Impact of lifestyle and demographics on the gut microbiota of acne patients and the response to minocycline by Rainer, B. M., Thompson, K. G., Antonescu, C., Florea, L., Mongodin, E. F., Kang, S., Chien, A. L.

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Genome stability of Lyme disease spirochetes: comparative genomics of Borrelia burgdorferi plasmids by Casjens, Sherwood R, Mongodin, Emmanuel F, Qiu, Wei-Gang, Luft, Benjamin J, Schutzer, Steven E, Gilcrease, Eddie B, Huang, Wai Mun, Vujadinovic, Marija, Aron, John K, Vargas, Levy C, Freeman, Sam, Radune, Diana, Weidman, Janice F, Dimitrov, George I, Khouri, Hoda M, Sosa, Julia E, Halpin, Rebecca A, Dunn, John J, Fraser, Claire M

“…Lyme disease is the most common tick-borne human illness in North America. In order to understand the molecular pathogenesis, natural diversity, population…”
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Whole-Genome Sequences of Thirteen Isolates of Borrelia burgdorferi by SCHUTZER, Steven E, FRASER-LIGGETT, Claire M, CASJENS, Sherwood R, QIU, Wei-Gang, DUNN, John J, MONGODIN, Emmanuel F, LUFT, Benjamin J

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Whole Genome Sequence of an Unusual Borrelia burgdorferi Sensu Lato Isolate by CASJENS, Sherwood R, FRASER-LIGGETT, Claire M, MONGODIN, Emmanuel F, QIU, Wei-Gang, DUNN, John J, LUFT, Benjamin J, SCHUTZER, Steven E

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Inter- and intra-specific pan-genomes of Borrelia burgdorferi sensu lato: genome stability and adaptive radiation by Mongodin, Emmanuel F, Casjens, Sherwood R, Bruno, John F, Xu, Yun, Drabek, Elliott Franco, Riley, David R, Cantarel, Brandi L, Pagan, Pedro E, Hernandez, Yozen A, Vargas, Levy C, Dunn, John J, Schutzer, Steven E, Fraser, Claire M, Qiu, Wei-Gang, Luft, Benjamin J

“…Lyme disease is caused by spirochete bacteria from the Borrelia burgdorferi sensu lato (B. burgdorferi s.l.) species complex. To reconstruct the evolution of…”
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Whole-Genome Sequences of Two Borrelia afzelii and Two Borrelia garinii Lyme Disease Agent Isolates by Casjens, Sherwood R, Mongodin, Emmanuel F, Qiu, Wei-Gang, Dunn, John J, Luft, Benjamin J, Fraser-Liggett, Claire M, Schutzer, Steve E

“…Human Lyme disease is commonly caused by several species of spirochetes in the Borrelia genus. In Eurasia these species are largely Borrelia afzelii, B…”
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Whole-Genome Sequences of Borrelia bissettii, Borrelia valaisiana, and Borrelia spielmanii by Schutzer, Steven E, Fraser-Liggett, Claire M, Qiu, Wei-Gang, Kraiczy, Peter, Mongodin, Emmanuel F, Dunn, John J, Luft, Benjamin J, Casjens, Sherwood R

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Fast, adaptive evolution at a bacterial host-resistance locus: The PFam54 gene array in Borrelia burgdorferi by Wywial, Ewa, Haven, James, Casjens, Sherwood R., Hernandez, Yozen A., Singh, Shaneen, Mongodin, Emmanuel F., Fraser-Liggett, Claire M., Luft, Benjamin J., Schutzer, Steven E., Qiu, Wei-Gang

“…Microbial pathogens have evolved sophisticated mechanisms for evasion of host innate and adaptive immunities. PFam54 is the largest paralogous gene family in…”
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Complete genome sequence of USA300, an epidemic clone of community-acquired meticillin-resistant Staphylococcus aureus by Diep, Binh An, Gill, Steven R, Chang, Richard F, Phan, Tiffany HaiVan, Chen, Jason H, Davidson, Matthew G, Lin, Felice, Lin, Jessica, Carleton, Heather A, Mongodin, Emmanuel F, Sensabaugh, George F, Perdreau-Remington, Françoise

“…USA300, a clone of meticillin-resistant Staphylococcus aureus, is a major source of community-acquired infections in the USA, Canada, and Europe. Our aim was…”
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A guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomes by Haft, Daniel H, Selengut, Jeremy, Mongodin, Emmanuel F, Nelson, Karen E

“…Clustered regularly interspaced short palindromic repeats (CRISPRs) are a family of DNA direct repeats found in many prokaryotic genomes. Repeats of 21-37 bp…”
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Integrated metagenomics/metaproteomics reveals human host microbiota signatures of Crohn's disease by Erickson, A. R., Cantarel, B. L., Lamendella, R., Darzi, Y., Mongodin, E. F., Pan, C., Shah, M., Halfvarson, J., Tysk, C., Henrissat, B., Raes, J., VerBerkmoes, N. C., Fraser, C. M., Hettich, R. L., Jansson, J. K.

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Insights on Evolution of Virulence and Resistance from the Complete Genome Analysis of an Early Methicillin-Resistant Staphylococcus aureus Strain and a Biofilm-Producing Methicillin-Resistant Staphylococcus epidermidis Strain by GILL, Steven R, FOUTS, Derrick E, DODSON, Robert J, DAUGHERTY, Sean C, MADUPU, Ramana, ANGIUOLI, Samuel V, DURKIN, A. Scott, HAFT, Daniel H, VAMATHEVAN, Jessica, KHOURI, Hoda, UTTERBACK, Terry, LEE, Chris, ARCHER, Gordon L, DIMITROV, George, LINGXIA JIANG, HAIYING QIN, JAN WEIDMAN, TRAN, Kevin, KANG, Kathy, HANCE, Ioana R, NELSON, Karen E, FRASER, Claire M, MONGODIN, Emmanuel F, DEBOY, Robert T, RAVEL, Jacques, PAULSEN, Ian T, KOLONAY, James F, BRINKAC, Lauren, BEANAN, Mauren

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Major Structural Differences and Novel Potential Virulence Mechanisms from the Genomes of Multiple Campylobacter Species by Fouts, Derrick E, Mongodin, Emmanuel F, Mandrell, Robert E, Miller, William G, Rasko, David A, Ravel, Jacques, Brinkac, Lauren M, DeBoy, Robert T, Parker, Craig T, Daugherty, Sean C, Dodson, Robert J, Durkin, A. Scott, Madupu, Ramana, Sullivan, Steven A, Shetty, Jyoti U, Ayodeji, Mobolanle A, Shvartsbeyn, Alla, Schatz, Michael C, Badger, Jonathan H, Fraser, Claire M, Nelson, Karen E

“…The genome of C. jejuni RM1221 is a single circular chromosome, 1,777,831 bp in length, with an average G+C content of 30.31%. There are a total of 1,884…”
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Whole genome comparisons of serotype 4b and 1/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species by Nelson, K.E, Fouts, D.E, Mongodin, E.F, Ravel, J, DeBoy, R.T, Kolonay, J.F, Rasko, D.A, Angiuoli, S.V, Gill, S.R, Paulsen, I.T, Wonderling, L.D, Uhlich, G.A, Bayles, D.O, Luchansky, J.B

“…The genomes of three strains of Listeria monocytogenes that have been associated with food-borne illness in the USA were subjected to whole genome comparative…”
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Chromosome Evolution in the Thermotogales: Large-Scale Inversions and Strain Diversification of CRISPR Sequences by DEBOY, Robert T, MONGODIN, Emmanuel F, EMERSON, Joanne B, NELSON, Karen E

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Gene Transfer and Genome Plasticity in Thermotoga maritima, a Model Hyperthermophilic Species by MONGODIN, Emmanuel F, HANCE, Ioana R, DEBOY, Robert T, GILL, Steven R, DAUGHERTY, Sean, HUBER, Robert, FRASER, Claire M, STETTER, Karl, NELSON, Karen E

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