Search Results - "Dutta, Annwesha"

What to Learn from a Few Visible Transitions’ Statistics? by Harunari, Pedro E., Dutta, Annwesha, Polettini, Matteo, Roldán, Édgar

“…Interpreting partial information collected from systems subject to noise is a key problem across scientific disciplines. Theoretical frameworks often focus on…”
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Capturing functional relations in fluid-structure interaction via machine learning by Soni, Tejas, Sharma, Ashwani, Dutta, Rajdeep, Dutta, Annwesha, Jayavelu, Senthilnath, Sarkar, Saikat

“…While fluid-structure interaction (FSI) problems are ubiquitous in various applications from cell biology to aerodynamics, they involve huge computational…”
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Structural conditions on complex networks for the Michaelis–Menten input–output response by Wong, Felix, Dutta, Annwesha, Chowdhury, Debashish, Gunawardena, Jeremy

“…The Michaelis–Menten (MM) fundamental formula describes how the rate of enzyme catalysis depends on substrate concentration. The familiar hyperbolic…”
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A Generalized Michaelis–Menten Equation in Protein Synthesis: Effects of Mis-Charged Cognate tRNA and Mis-Reading of Codon by Dutta, Annwesha, Chowdhury, Debashish

“…The sequence of amino acid monomers in the primary structure of a protein is decided by the corresponding sequence of codons (triplets of nucleic acid…”
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Stochastic thermodynamics and modes of operation of a ribosome: A network theoretic perspective by Dutta, Annwesha, Schütz, Gunter M, Chowdhury, Debashish

“…The ribosome is one of the largest and most complex macromolecular machines in living cells. It polymerizes a protein in a step-by-step manner as directed by…”
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Fluctuation Theorem as a special case of Girsanov Theorem by Dutta, Annwesha, Sarkar, Saikat

“…Stochastic thermodynamics is an important development in the direction of finding general thermodynamic principles for non-equilibrium systems. We believe…”
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A generalized Michaelis-Menten equation in protein synthesis: effects of mis-charged cognate tRNA and mis-reading of codon by Dutta, Annwesha, Chowdhury, Debashish

“…Bulletin of Mathematical Biology (Society for Mathematical Biology), vol. 79, 1005 (2017) The sequence of amino acid monomers in the primary structure of a…”
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What to learn from a few visible transitions' statistics? by Harunari, Pedro E, Dutta, Annwesha, Polettini, Matteo, Roldán, Édgar

“…Interpreting partial information collected from systems subject to noise is a key problem across scientific disciplines. Theoretical frameworks often focus on…”
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Stochastic thermodynamics and modes of operation of a ribosome: a network theoretic perspective by Dutta, Annwesha, Schütz, Gunter M, Chowdhury, Debashish

“…Phys. Rev. E 101, 032402 (2020) The ribosome is one of the largest and most complex macromolecular machines in living cells. It polymerizes a protein in a…”
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A Biologically Motivated Asymmetric Exclusion Process: interplay of congestion in RNA polymerase traffic and slippage of nascent transcript by Ghosh, Soumendu, Dutta, Annwesha, Patra, Shubhadeep, Sato, Jun, Nishinari, Katsuhiro, Chowdhury, Debashish

“…Phys. Rev. E 99, 052122 (2019) We develope a theoretical framework, based on exclusion process, that is motivated by a biological phenomenon called transcript…”
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