Search Results - "Dudnakova, Tatiana"

Mapping the Human miRNA Interactome by CLASH Reveals Frequent Noncanonical Binding by Helwak, Aleksandra, Kudla, Grzegorz, Dudnakova, Tatiana, Tollervey, David

“…MicroRNAs (miRNAs) play key roles in gene regulation, but reliable bioinformatic or experimental identification of their targets remains difficult. To provide…”
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Transcription factor Wilms' tumor 1 regulates developmental RNAs through 3' UTR interaction by Bharathavikru, Ruthrothaselvi, Dudnakova, Tatiana, Aitken, Stuart, Slight, Joan, Artibani, Mara, Hohenstein, Peter, Tollervey, David, Hastie, Nick

“…Wilms' tumor 1 (WT1) is essential for the development and homeostasis of multiple mesodermal tissues. Despite evidence for post-transcriptional roles, no…”
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Lineage-specific distribution of high levels of genomic 5-hydroxymethylcytosine in mammalian development by Ruzov, Alexey, Tsenkina, Yanina, Serio, Andrea, Dudnakova, Tatiana, Fletcher, Judy, Bai, Yu, Chebotareva, Tatiana, Pells, Steve, Hannoun, Zara, Sullivan, Gareth, Chandran, Siddharthan, Hay, David C, Bradley, Mark, Wilmut, Ian, De Sousa, Paul

“…Methylation of cytosine is a DNA modification associated with gene repression. Recently, a novel cytosine modification, 5-hydroxymethylcytosine （5-hmC） has…”
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Importance of Long Non-coding RNAs in the Development and Disease of Skeletal Muscle and Cardiovascular Lineages by Sweta, Sweta, Dudnakova, Tatiana, Sudheer, Smita, Baker, Andrew H, Bhushan, Raghu

“…The early mammalian embryo is characterized by the presence of three germ layers-the outer ectoderm, middle mesoderm and inner endoderm. The mesoderm is…”
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Control of endothelial cell function and arteriogenesis by MEG3:EZH2 epigenetic regulation of integrin expression by Dunn-Davies, Hywel, Dudnakova, Tatiana, Nogara, Antonella, Rodor, Julie, Thomas, Anita C., Parish, Elisa, Gautier, Philippe, Meynert, Alison, Ulitsky, Igor, Madeddu, Paolo, Caporali, Andrea, Baker, Andrew, Tollervey, David, Mitić, Tijana

“…Epigenetic processes involving long non-coding RNAs regulate endothelial gene expression. However, the underlying regulatory mechanisms causing endothelial…”
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Transient Accumulation of 5-Carboxylcytosine Indicates Involvement of Active Demethylation in Lineage Specification of Neural Stem Cells by Wheldon, Lee M., Abakir, Abdulkadir, Ferjentsik, Zoltan, Dudnakova, Tatiana, Strohbuecker, Stephanie, Christie, Denise, Dai, Nan, Guan, Shengxi, Foster, Jeremy M., Corrêa, Ivan R., Loose, Matthew, Dixon, James E., Sottile, Virginie, Johnson, Andrew D., Ruzov, Alexey

“…5-Methylcytosine (5mC) is an epigenetic modification involved in regulation of gene activity during differentiation. Tet dioxygenases oxidize 5mC to…”
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Mapping targets for small nucleolar RNAs in yeast by Dudnakova, Tatiana, Dunn-Davies, Hywel, Peters, Rosie, Tollervey, David

“…Recent analyses implicate changes in the expression of the box C/D class of small nucleolar RNAs (snoRNAs) in several human diseases. Here we report the…”
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Mapping targets for small nucleolar RNAs in yeast by Dudnakova, Tatiana, Dunn-Davies, Hywel, Peters, Rosie, Tollervey, David

“…Background: Recent analyses implicate changes in the expression of the box C/D class of small nucleolar RNAs (snoRNAs) in several human diseases. Methods: Here…”
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Deducing the stage of origin of Wilms' tumours from a developmental series of Wt1-mutant mice by Berry, Rachel L, Ozdemir, Derya D, Aronow, Bruce, Lindström, Nils O, Dudnakova, Tatiana, Thornburn, Anna, Perry, Paul, Baldock, Richard, Armit, Chris, Joshi, Anagha, Jeanpierre, Cécile, Shan, Jingdong, Vainio, Seppo, Baily, James, Brownstein, David, Davies, Jamie, Hastie, Nicholas D, Hohenstein, Peter

“…Wilms' tumours, paediatric kidney cancers, are the archetypal example of tumours caused through the disruption of normal development. The genetically…”
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Methods to Identify and Validate WT1-RNA Interaction by Bharathavikru, Ruthrothaselvi, Dudnakova, Tatiana

“…Tumor suppressor protein, Wt1 is a transcription factor that binds to DNA sequence similar to the Early Growth Response gene, EGR1 consensus binding sequence…”
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Epigenetic control of vascular endothelial function revealed by multi-omics by Dunn-Davies, Hywel, Dudnakova, Tatiana, Baker, Andrew H, Mitić, Tijana

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Rio1 mediates ATP-dependent final maturation of 40S ribosomal subunits by Turowski, Tomasz W, Lebaron, Simon, Zhang, Elodie, Peil, Lauri, Dudnakova, Tatiana, Petfalski, Elisabeth, Granneman, Sander, Rappsilber, Juri, Tollervey, David

“…During the last step in 40S ribosome subunit biogenesis, the PIN-domain endonuclease Nob1 cleaves the 20S pre-rRNA at site D, to form the mature 18S rRNAs…”
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HuD Is a Neural Translation Enhancer Acting on mTORC1-Responsive Genes and Counteracted by the Y3 Small Non-coding RNA by Tebaldi, Toma, Zuccotti, Paola, Peroni, Daniele, Köhn, Marcel, Gasperini, Lisa, Potrich, Valentina, Bonazza, Veronica, Dudnakova, Tatiana, Rossi, Annalisa, Sanguinetti, Guido, Conti, Luciano, Macchi, Paolo, D’Agostino, Vito, Viero, Gabriella, Tollervey, David, Hüttelmaier, Stefan, Quattrone, Alessandro

“…The RNA-binding protein HuD promotes neurogenesis and favors recovery from peripheral axon injury. HuD interacts with many mRNAs, altering both stability and…”
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MIR503HG Loss Promotes Endothelial-to-Mesenchymal Transition in Vascular Disease by Monteiro, João P., Rodor, Julie, Caudrillier, Axelle, Scanlon, Jessica P., Spiroski, Ana-Mishel, Dudnakova, Tatiana, Pflüger-Müller, Beatrice, Shmakova, Alena, von Kriegsheim, Alex, Deng, Lin, Taylor, Richard S., Wilson-Kanamori, John R., Chen, Shiau-Haln, Stewart, Kevin, Thomson, Adrian, Mitić, Tijana, McClure, John D., Iynikkel, Jean, Hadoke, Patrick W.F., Denby, Laura, Bradshaw, Angela C., Caruso, Paola, Morrell, Nicholas W., Kovacic, Jason C., Ulitsky, Igor, Henderson, Neil C., Caporali, Andrea, Leisegang, Matthias S., Brandes, Ralf P., Baker, Andrew H.

“…[Figure: see text]…”
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Deducing the stage of origin of Wilms' tumours from a developmental series of Wt1-mutant mice by Berry, Rachel L., Ozdemir, Derya D., Aronow, Bruce, Lindström, Nils O., Dudnakova, Tatiana, Thornburn, Anna, Perry, Paul, Baldock, Richard, Armit, Chris, Joshi, Anagha, Jeanpierre, Cécile, Shan, Jingdong, Vainio, Seppo, Baily, James, Brownstein, David, Davies, Jamie, Hastie, Nicholas D., Hohenstein, Peter

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Rrp5 Binding at Multiple Sites Coordinates Pre-rRNA Processing and Assembly by Lebaron, Simon, Segerstolpe, Åsa, French, Sarah L., Dudnakova, Tatiana, de lima Alves, Flavia, Granneman, Sander, Rappsilber, Juri, Beyer, Ann L., Wieslander, Lars, Tollervey, David

“…In vivo UV crosslinking identified numerous preribosomal RNA (pre-rRNA) binding sites for the large, highly conserved ribosome synthesis factor Rrp5…”
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Deducing the stage of origin of Wilms' tumours from a developmental series of Wt1 mutants by Berry, Rachel L., Ozdemir, Derya, Aronow, Bruce, Lindström, Nils O., Dudnakova, Tatiana, Thornburn, Anna, Perry, Paul, Baldock, Richard, Armit, Chris, Joshi, Anagha, Jeanpierre, Cécile, Shan, Jingdong, Vainio, Seppo, Baily, James, Brownstein, David, Davies, Jamie, Hastie, Nicholas D., Hohenstein, Peter

“…Wilms' tumours, paediatric kidney cancers, are the archetypal example of tumours caused through the disruption of normal development. The genetically best…”
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