Search Results - "Du, Jingcheng"
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1
Gene2vec: distributed representation of genes based on co-expression
Published in BMC genomics (04-02-2019)“…Existing functional description of genes are categorical, discrete, and mostly through manual process. In this work, we explore the idea of gene embedding,…”
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2
Deep learning in clinical natural language processing: a methodical review
Published in Journal of the American Medical Informatics Association : JAMIA (01-03-2020)“…This article methodically reviews the literature on deep learning (DL) for natural language processing (NLP) in the clinical domain, providing quantitative…”
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3
Extracting psychiatric stressors for suicide from social media using deep learning
Published in BMC medical informatics and decision making (23-07-2018)“…Suicide has been one of the leading causes of deaths in the United States. One major cause of suicide is psychiatric stressors. The detection of psychiatric…”
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4
Leveraging machine learning-based approaches to assess human papillomavirus vaccination sentiment trends with Twitter data
Published in BMC medical informatics and decision making (05-07-2017)“…As one of the serious public health issues, vaccination refusal has been attracting more and more attention, especially for newly approved human papillomavirus…”
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5
Mining on Alzheimer’s diseases related knowledge graph to identity potential AD-related semantic triples for drug repurposing
Published in BMC bioinformatics (30-09-2022)“…Abstract Background To date, there are no effective treatments for most neurodegenerative diseases. Knowledge graphs can provide comprehensive and semantic…”
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6
Exploring temporal suicidal behavior patterns on social media: Insight from Twitter analytics
Published in Health informatics journal (01-06-2020)“…A valid mechanism for suicide detection and intervention to a wider population online has not yet been fully established. With the increasing suicide rate, we…”
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Using Machine Learning–Based Approaches for the Detection and Classification of Human Papillomavirus Vaccine Misinformation: Infodemiology Study of Reddit Discussions
Published in Journal of medical Internet research (05-08-2021)“…Background The rapid growth of social media as an information channel has made it possible to quickly spread inaccurate or false vaccine information, thus…”
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8
Explainable artificial intelligence and domain adaptation for predicting HIV infection with graph neural networks
Published in Annals of medicine (Helsinki) (01-12-2024)“…Investigation of explainable deep learning methods for graph neural networks to predict HIV infections with social network information and performing domain…”
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9
Machine learning-based donor permission extraction from informed consent documents
Published in BMC bioinformatics (15-12-2023)“…With more clinical trials are offering optional participation in the collection of bio-specimens for biobanking comes the increasing complexity of requirements…”
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10
Using a Machine Learning Approach to Monitor COVID-19 Vaccine Adverse Events (VAE) from Twitter Data
Published in Vaccines (Basel) (11-01-2022)“…Social media can be used to monitor the adverse effects of vaccines. The goal of this project is to develop a machine learning and natural language processing…”
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11
Deep learning with sentence embeddings pre-trained on biomedical corpora improves the performance of finding similar sentences in electronic medical records
Published in BMC medical informatics and decision making (30-04-2020)“…Capturing sentence semantics plays a vital role in a range of text mining applications. Despite continuous efforts on the development of related datasets and…”
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Machine learning models for abstract screening task - A systematic literature review application for health economics and outcome research
Published in BMC medical research methodology (09-05-2024)“…Systematic literature reviews (SLRs) are critical for life-science research. However, the manual selection and retrieval of relevant publications can be a…”
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13
Comparability of clinical trials and spontaneous reporting data regarding COVID-19 vaccine safety
Published in Scientific reports (29-06-2022)“…Severe adverse events (AEs) after COVID-19 vaccination are not well studied in randomized controlled trials (RCTs) due to rarity and short follow-up. To…”
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On the evidence consistency of pharmacovigilance outcomes between Food and Drug Administration Adverse Event Reporting System and electronic medical record data for acute mania patients
Published in Health informatics journal (01-06-2020)“…Evaluation of premarketing drug safety in clinical trials is often limited, due to the relatively small sample size and short follow-up time. The data…”
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15
Dynamic Prognosis Prediction for Patients on DAPT After Drug-Eluting Stent Implantation: Model Development and Validation
Published in Journal of the American Heart Association (06-02-2024)“…The rapid evolution of artificial intelligence (AI) in conjunction with recent updates in dual antiplatelet therapy (DAPT) management guidelines emphasizes the…”
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16
Characterization of the Differential Adverse Event Rates by Race/Ethnicity Groups for HPV Vaccine by Integrating Data From Different Sources
Published in Frontiers in pharmacology (24-05-2018)“…Data from the Vaccine Adverse Event Reporting System (VAERS) contain spontaneously reported adverse events (AEs) from the public. It has been a major data…”
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17
Comparing drug safety of hepatitis C therapies using post-market data
Published in BMC medical informatics and decision making (08-08-2019)“…Hepatitis C affects about 3 % of the world's population. In the United States, about 3.5 million have chronic hepatitis C, and it is the leading cause of liver…”
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Accelerating Evidence Synthesis in Observational Studies: Development of a Living Natural Language Processing-Assisted Intelligent Systematic Literature Review System
Published in JMIR Medical Informatics (23-10-2024)“…Systematic literature review (SLR), a robust method to identify and summarize evidence from published sources, is considered to be a complex, time-consuming,…”
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A Bayesian Network to Predict the Risk of Post Influenza Vaccination Guillain-Barré Syndrome: Development and Validation Study
Published in JMIR public health and surveillance (25-03-2022)“…Identifying the key factors of Guillain-Barré syndrome (GBS) and predicting its occurrence are vital for improving the prognosis of patients with GBS. However,…”
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Natural Language Processing-Powered Real-Time Monitoring Solution for Vaccine Sentiments and Hesitancy on Social Media: System Development and Validation
Published in JMIR medical informatics (21-06-2024)“…Vaccines serve as a crucial public health tool, although vaccine hesitancy continues to pose a significant threat to full vaccine uptake and, consequently,…”
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