Search Results - "Doran, G."

Sixteen diverse laboratory mouse reference genomes define strain-specific haplotypes and novel functional loci by Lilue, Jingtao, Doran, Anthony G., Fiddes, Ian T., Abrudan, Monica, Armstrong, Joel, Bennett, Ruth, Chow, William, Collins, Joanna, Collins, Stephan, Czechanski, Anne, Danecek, Petr, Diekhans, Mark, Dolle, Dirk-Dominik, Dunn, Matt, Durbin, Richard, Earl, Dent, Ferguson-Smith, Anne, Flicek, Paul, Flint, Jonathan, Frankish, Adam, Fu, Beiyuan, Gerstein, Mark, Gilbert, James, Goodstadt, Leo, Harrow, Jennifer, Howe, Kerstin, Ibarra-Soria, Ximena, Kolmogorov, Mikhail, Lelliott, Chris J., Logan, Darren W., Loveland, Jane, Mathews, Clayton E., Mott, Richard, Muir, Paul, Nachtweide, Stefanie, Navarro, Fabio C. P., Odom, Duncan T., Park, Naomi, Pelan, Sarah, Pham, Son K., Quail, Mike, Reinholdt, Laura, Romoth, Lars, Shirley, Lesley, Sisu, Cristina, Sjoberg-Herrera, Marcela, Stanke, Mario, Steward, Charles, Thomas, Mark, Threadgold, Glen, Thybert, David, Torrance, James, Wong, Kim, Wood, Jonathan, Yalcin, Binnaz, Yang, Fengtang, Adams, David J., Paten, Benedict, Keane, Thomas M.

“…We report full-length draft de novo genome assemblies for 16 widely used inbred mouse strains and find extensive strain-specific haplotype variation. We…”
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Formally exact simulations of mesoscale exciton dynamics in molecular materials by Varvelo, Leonel, Lynd, Jacob K, Bennett, Doran I. G

“…Excited state carriers, such as excitons, can diffuse on the 100 nm to micron length scale in molecular materials but only delocalize over short length scales…”
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Multiscale model of light harvesting by photosystem II in plants by Amarnath, Kapil, Bennett, Doran I. G., Schneider, Anna R., Fleming, Graham R.

“…The first step of photosynthesis in plants is the absorption of sunlight by pigments in the antenna complexes of photosystem II (PSII), followed by transfer of…”
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A Structure-Based Model of Energy Transfer Reveals the Principles of Light Harvesting in Photosystem II Supercomplexes by Bennett, Doran I. G, Amarnath, Kapil, Fleming, Graham R

“…Photosystem II (PSII) initiates photosynthesis in plants through the absorption of light and subsequent conversion of excitation energy to chemical energy via…”
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A hot and fast ultra-stripped supernova that likely formed a compact neutron star binary by De, K, Kasliwal, M M, Ofek, E O, Moriya, T J, Burke, J, Cao, Y, Cenko, S B, Doran, G B, Duggan, G E, Fender, R P, Fransson, C, Gal-Yam, A, Horesh, A, Kulkarni, S R, Laher, R R, Lunnan, R, Manulis, I, Masci, F, Mazzali, P A, Nugent, P E, Perley, D A, Petrushevska, T, Piro, A L, Rumsey, C, Sollerman, J, Sullivan, M, Taddia, F

“…Compact neutron star binary systems are produced from binary massive stars through stellar evolution involving up to two supernova explosions. The final stages…”
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Local protein solvation drives direct down-conversion in phycobiliprotein PC645 via incoherent vibronic transport by Blau, Samuel M., Bennett, Doran I. G., Kreisbeck, Christoph, Scholes, Gregory D., Aspuru-Guzik, Alán

“…The mechanisms controlling excitation energy transport (EET) in light-harvesting complexes remain controversial. Following the observation of long-lived beats…”
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iPTF 16asu: A Luminous, Rapidly Evolving, and High-velocity Supernova by Whitesides, L., Lunnan, R., Kasliwal, M. M., Perley, D. A., Corsi, A., Cenko, S. B., Blagorodnova, N., Cao, Y., Cook, D. O., Doran, G. B., Frederiks, D. D., Fremling, C., Hurley, K., Karamehmetoglu, E., Kulkarni, S. R., Leloudas, G., Masci, F., Nugent, P. E., Ritter, A., Rubin, A., Savchenko, V., Sollerman, J., Svinkin, D. S., Taddia, F., Vreeswijk, P., Wozniak, P.

“…Wide-field surveys are discovering a growing number of rare transients whose physical origin is not yet well understood. Here we present optical and UV data…”
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CDK9-mediated transcription elongation is required for MYC addiction in hepatocellular carcinoma by Huang, Chun-Hao, Lujambio, Amaia, Zuber, Johannes, Tschaharganeh, Darjus F, Doran, Michael G, Evans, Michael J, Kitzing, Thomas, Zhu, Nan, de Stanchina, Elisa, Sawyers, Charles L, Armstrong, Scott A, Lewis, Jason S, Sherr, Charles J, Lowe, Scott W

“…One-year survival rates for newly diagnosed hepatocellular carcinoma (HCC) are <50%, and unresectable HCC carries a dismal prognosis owing to its…”
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Mechanistic Regimes of Vibronic Transport in a Heterodimer and the Design Principle of Incoherent Vibronic Transport in Phycobiliproteins by Bennett, Doran I. G, Malý, Pavel, Kreisbeck, Christoph, van Grondelle, Rienk, Aspuru-Guzik, Alán

“…Following the observation of coherent oscillations in nonlinear spectra of photosynthetic pigment protein complexes, in particular, phycobilliproteins such as…”
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Androgen Receptor Upregulation Mediates Radioresistance after Ionizing Radiation by Spratt, Daniel E, Evans, Michael J, Davis, Brian J, Doran, Michael G, Lee, Man Xia, Shah, Neel, Wongvipat, John, Carnazza, Kathryn E, Klee, George G, Polkinghorn, William, Tindall, Donald J, Lewis, Jason S, Sawyers, Charles L

“…Clinical trials have established the benefit of androgen deprivation therapy (ADT) combined with radiotherapy in prostate cancer. ADT sensitizes prostate…”
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Non-invasive mapping of deep-tissue lymph nodes in live animals using a multimodal PET/MRI nanoparticle by Thorek, Daniel L. J., Ulmert, David, Diop, Ndeye-Fatou M., Lupu, Mihaela E., Doran, Michael G., Huang, Ruimin, Abou, Diane S., Larson, Steven M., Grimm, Jan

“…The invasion status of tumour-draining lymph nodes (LNs) is a critical indicator of cancer stage and is important for treatment planning. Clinicians currently…”
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Deep genome sequencing and variation analysis of 13 inbred mouse strains defines candidate phenotypic alleles, private variation and homozygous truncating mutations by Doran, Anthony G, Wong, Kim, Flint, Jonathan, Adams, David J, Hunter, Kent W, Keane, Thomas M

“…The Mouse Genomes Project is an ongoing collaborative effort to sequence the genomes of the common laboratory mouse strains. In 2011, the initial analysis of…”
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R-band light-curve properties of Type Ia supernovae from the (intermediate) Palomar Transient Factory by Papadogiannakis, S, Goobar, A, Amanullah, R, Bulla, M, Dhawan, S, Doran, G, Feindt, U, Ferretti, R, Hangard, L, Howell, D A, Johansson, J, Kasliwal, M M, Laher, R, Masci, F, Nyholm, A, Ofek, E, Sollerman, J, Yan, L

“…We present the best 265 sampled R-band light curves of spectroscopically identified Type Ia supernovae (SNe) from the Palomar Transient Factory (PTF;…”
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Dysregulation of microRNA-204 mediates migration and invasion of endometrial cancer by regulating FOXC1 by Chung, T.K.H., Lau, T.S., Cheung, T.H., Yim, S.F., Lo, K.W.K., Siu, N.S.S., Chan, L.K.Y., Yu, M.Y., Kwong, J., Doran, G., Barroilhet, L.M., Ng, A.S.W., Wong, R.R.Y., Wang, V.W., Mok, S.C., Smith, D.I., Berkowitz, R.S., Wong, Y.F.

“…MicroRNAs (miRNAs) regulate mRNA stability and protein expression, and certain miRNAs have been demonstrated to act either as oncogenes or tumor suppressors…”
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Photochemical Control of Exciton Superradiance in Light-Harvesting Nanotubes by Doria, Sandra, Sinclair, Timothy S, Klein, Nathan D, Bennett, Doran I. G, Chuang, Chern, Freyria, Francesca S, Steiner, Colby P, Foggi, Paolo, Nelson, Keith A, Cao, Jianshu, Aspuru-Guzik, Alán, Lloyd, Seth, Caram, Justin R, Bawendi, Moungi G

“…Photosynthetic antennae and organic electronic materials use topological, structural, and molecular control of delocalized excitons to enhance and direct…”
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Snpdat: easy and rapid annotation of results from de novo snp discovery projects for model and non-model organisms by Doran, Anthony G, Creevey, Christopher J

“…Single nucleotide polymorphisms (SNPs) are the most abundant genetic variant found in vertebrates and invertebrates. SNP discovery has become a highly…”
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Long-range energy transport in photosystem II by Roden, Jan J J, Bennett, Doran I G, Whaley, K Birgitta

“…We simulate the long-range inter-complex electronic energy transfer in photosystem II-from the antenna complex, via a core complex, to the reaction…”
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Energetics of Nanocrystalline TiO2 by Ranade, M. R., Navrotsky, A., Zhang, H. Z., Banfield, J. F., Elder, S. H., Zaban, A., Borse, P. H., Kulkarni, S. K., Doran, G. S., Whitfield, H. J.

“…The energetics of the TiO2polymorphs (rutile, anatase, and brookite) were studied by high temperature oxide melt drop solution calorimetry. Relative to bulk…”
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Maternal caffeine administration to ewes does not affect perinatal lamb survival by Robertson, S.M., Edwards, S.H., Doran, G.S., Friend, M.A.

“…•Difficult birth was a key cause of lamb mortality.•Caffeine to lambing ewes did not increase lamb survival or weight at marking age.•Caffeine did not reduce…”
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Utility of FDG-PET in clinical neuroendocrine prostate cancer by Spratt, Daniel E., Gavane, Somali, Tarlinton, Lisa, Fareedy, Shoaib B., Doran, Michael G., Zelefsky, Michael J., Osborne, Joseph R.

“…BACKGROUND Fluorodeoxyglucose (FDG) positron emission tomography (PET) has well‐characterized limitations in prostate adenocarcinoma (PCA). However, data…”
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