Search Results - "Dobson, A T"

The ImageJ ecosystem: Open‐source software for image visualization, processing, and analysis by Schroeder, Alexandra B., Dobson, Ellen T. A., Rueden, Curtis T., Tomancak, Pavel, Jug, Florian, Eliceiri, Kevin W.

“…For decades, biologists have relied on software to visualize and interpret imaging data. As techniques for acquiring images increase in complexity, resulting…”
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A semi-automated machine-learning based workflow for ellipsoid zone analysis in eyes with macular edema: SCORE2 pilot study by Etheridge, Tyler, Dobson, Ellen T A, Wiedenmann, Marcel, Papudesu, Chandana, Scott, Ingrid U, Ip, Michael S, Eliceiri, Kevin W, Blodi, Barbara A, Domalpally, Amitha

“…To develop a semi-automated, machine-learning based workflow to evaluate the ellipsoid zone (EZ) assessed by spectral domain optical coherence tomography…”
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HIV RGB: Automated Single-Cell Analysis of HIV-1 Rev-Dependent RNA Nuclear Export and Translation Using Image Processing in KNIME by Evans, 3rd, Edward L, Pocock, Ginger M, Einsdorf, Gabriel, Behrens, Ryan T, Dobson, Ellen T A, Wiedenmann, Marcel, Birkhold, Christian, Ahlquist, Paul, Eliceiri, Kevin W, Sherer, Nathan M

“…Single-cell imaging has emerged as a powerful means to study viral replication dynamics and identify sites of virus−host interactions. Multivariate aspects of…”
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Methylenetetrahydrofolate reductase C677T and A1298C variants do not affect ongoing pregnancy rates following IVF by DOBSON, A. T, DAVIS, R. M, ROSEN, M. P, SHEN, S, RINAUDO, P. F, CHAN, J, CEDARS, M. I

“…There is concern that IVF could compromise normal imprinting and methylation of DNA. Methylenetetrahydrofolate reductase (MTHFR) regulates the flow of folic…”
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Integration of the ImageJ Ecosystem in KNIME Analytics Platform by Dietz, Christian, Rueden, Curtis T., Helfrich, Stefan, Dobson, Ellen T. A., Horn, Martin, Eglinger, Jan, Evans, Edward L., McLean, Dalton T., Novitskaya, Tatiana, Ricke, William A., Sherer, Nathan M., Zijlstra, Andries, Berthold, Michael R., Eliceiri, Kevin W.

“…Open-source software tools are often used for analysis of scientific image data due to their flexibility and transparency in dealing with rapidly evolving…”
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Long-term promoter activity during herpes simplex virus latency by Lokensgard, J R, Bloom, D C, Dobson, A T, Feldman, L T

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Herpes Simplex Virus Latency-Associated Transcript is a Stable Intron by Farrell, Michael J., Dobson, Anthony T., Feldman, Lawrence T.

“…The latency-associated transcript (LAT) is the major viral transcript detected by in situ hybridization of mouse and human sensory ganglia latently infected…”
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Physical characterization of the herpes simplex virus latency-associated transcript in neurons by WAGNER, E. K, GAYATHRI DEVI-RAO, FELDMAN, L. T, DOBSON, A. T, YI-FAN ZHANG, FLANAGAN, W. M, STEVENS, J. G

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Identification of the latency-associated transcript promoter by expression of rabbit beta-globin mRNA in mouse sensory nerve ganglia latently infected with a recombinant herpes simplex virus by Dobson, A T, Sederati, F, Devi-Rao, G, Flanagan, W M, Farrell, M J, Stevens, J G, Wagner, E K, Feldman, L T

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Pathways of viral gene expression during acute neuronal infection with HSV-1 by Margolis, T P, Sedarati, F, Dobson, A T, Feldman, L T, Stevens, J G

“…Pathways of viral gene expression were investigated during the acute phase of sensory ganglionic infection with HSV-1. To facilitate these studies we…”
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Prevention of herpes simplex virus infection and latency by prophylactic treatment with acyclovir in a weanling mouse model by Dobson, Anthony T., Little, Bertis B., Scott, L.Laurie

“…OBJECTIVE: Acyclovir is an antiviral agent that inhibits acute herpes simplex virus replication and decreases the frequency of reactivation, but it is not…”
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Decreased reporter gene expression during latent infection with HSV LAT promoter constructs by Margolis, T P, Bloom, D C, Dobson, A T, Feldman, L T, Stevens, J G

“…The latency-associated transcripts (LAT), which code from an 8.5 kb segment of the internal repeat region of the HSV genome, are the only viral transcripts…”
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Ellipsoid Zone Defects in Retinal Vein Occlusion Correlates With Visual Acuity Prognosis: SCORE2 Report 14 by Etheridge, Tyler, Dobson, Ellen T A, Wiedenmann, Marcel, Oden, Neal, VanVeldhuisen, Paul, Scott, Ingrid U, Ip, Michael S, Eliceiri, Kevin W, Blodi, Barbara A, Domalpally, Amitha

“…To evaluate the association between ellipsoid zone (EZ) on spectral domain optical coherence tomography (SD-OCT) and visual acuity letter score (VALS) in…”
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In vivo deletion analysis of the herpes simplex virus type 1 latency-associated transcript promoter by Dobson, A T, Margolis, T P, Gomes, W A, Feldman, L T

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2020 BioImage Analysis Survey: Community experiences and needs for the future by Jamali, Nasim, Dobson, Ellen Ta, Eliceiri, Kevin W, Carpenter, Anne E, Cimini, Beth A

“…In this paper, we summarize a global survey of 484 participants of the imaging community, conducted in 2020 through the NIH Center for Open BioImage Analysis…”
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A latent, nonpathogenic HSV-1-derived vector stably expresses beta-galactosidase in mouse neurons by Dobson, A T, Margolis, T P, Sedarati, F, Stevens, J G, Feldman, L T

“…A genetically engineered herpes simplex virus variant was constructed for use as a stable gene vector for neurons. To inhibit replication, the agent possessed…”
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Anti-inflammatory properties of furobufen by Martel, R R, Rochefort, J G, Klicius, J, Dobson, T A

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Biosynthesis of fusaric acid in cultures of Fusarium oxysporum Schlecht by Dobson, T A, Desaty, D, Brewer, D, Vining, L C

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ImageJ and CellProfiler: Complements in Open-Source Bioimage Analysis by Dobson, Ellen T A, Cimini, Beth, Klemm, Anna H, Wählby, Carolina, Carpenter, Anne E, Eliceiri, Kevin W

“…ImageJ and CellProfiler have long been leading open-source platforms in the field of bioimage analysis. ImageJ's traditional strength is in single-image…”
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Conservation and the Social Sciences by Mascia, Michael B., Brosius, J. Peter, Dobson, Tracy A., Forbes, Bruce C., Horowitz, Leah, McKean, Margaret A., Turner, Nancy J.

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