Search Results - "Dinner, A"

Characteristics that increase the risk for pain on propofol injection by Leff, Phillip J, Dinner, Brett A, Chuang, Keng-Yu, Leff, David B

“…Propofol for anesthesia has become increasingly popular for endoscopic procedures. However, pain on propofol injection (POPI) remains an issue with…”
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CHARMM: The biomolecular simulation program by Brooks, B.R, Brooks, C.L. III, Mackerell, A.D. Jr, Nilsson, L, Petrella, R.J, Roux, B, Won, Y, Archontis, G, Bartels, C, Boresch, S, Caflisch, A, Caves, L, Cui, Q, Dinner, A.R, Feig, M, Fischer, S, Gao, J, Hodoscek, M, Im, W, Kuczera, K, Lazaridis, T, Ma, J, Ovchinnikov, V, Paci, E, Pastor, R.W, Post, C.B, Pu, J.Z, Schaefer, M, Tidor, B, Venable, R.M, Woodcock, H.L, Wu, X, Yang, W, York, D.M, Karplus, M

“…CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and widely used molecular simulation program. It has been developed over the last three…”
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Flow-Dependent Unfolding and Refolding of an RNA by Nonequilibrium Umbrella Sampling by Dickson, Alex, Maienschein-Cline, Mark, Tovo-Dwyer, Allison, Hammond, Jeff R, Dinner, Aaron R

“…Nonequilibrium experiments of single biomolecules such as force-induced unfolding reveal details about a few degrees of freedom of a complex system. Molecular…”
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S3840 One-Two Punch: Asymptomatic Paraganglioma and Hepatocellular Carcinoma by Charley, Ericka, Dinner, Brett A., Leff, Phillip, Chuang, Keng-Yu

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The Immunological Synapse Balances T Cell Receptor Signaling and Degradation by Lee, Kyeong-Hee, Dinner, Aaron R., Tu, Chun, Campi, Gabriele, Raychaudhuri, Subhadip, Varma, Rajat, Sims, Tasha N., Burack, W. Richard, Wu, Hui, Wang, Julia, Kanagawa, Osami, Markiewicz, Mary, Allen, Paul M., Dustin, Michael L., Chakraborty, Arup K., Shaw, Andrey S.

“…The immunological synapse is a specialized cell-cell junction between T cell and antigen-presenting cell surfaces. It is characterized by a central cluster of…”
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S3496 A Rare Case of Non-Cirrhotic Portal Hypertension Caused by Necrobiotic Xanthogranuloma by Leff, Phillip, Nadeem, Rida, Dinner, Brett A., Kundu, Ria, Alkhouri, Naim, Kohli, Anita

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S2692 An Unfortunate Case of an Esophagopericardial Fistula by Leff, Phillip, Saugstad, Austin, Barvo, Matthew M., Dinner, Brett A., Lee, Robert, Tessler, David

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S3436 Heterozygous H63D Hemochromatosis Diagnosed in a Patient Presenting with Ascending Cholangitis Symptoms by Barvo, Matthew M., Arif, Muhammad, Leff, Phillip, Ravella, Vishal, Dinner, Brett A., Lee, Robert, Khokhar, Mateen

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S3435 A Novel Approach in the Treatment of Entamoeba Liver Abscess by Barvo, Matthew M., Javed, Moiz, Hussain, Mohammad Wajid, Leff, Phillip, Dinner, Brett A., Lee, Robert, Macelwee, Mark

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S414 Between the Cheeks: An Exploration of Incidence Trends of Anus, Anal Canal, and Rectal Cancer in the United States by Dinner, Brett A., Viggiano, Taylor, Leff, Phillip, Charley, Ericka, Barvo, Matthew M., Chuang, Keng-Yu

“…Over the last 2 decades (2000-2020), the IR correlation was positive in Black (includes Hispanic), Hispanic (any race), Non-Hispanic White, and White (includes…”
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S4047 The Great Squeeze: When Histoplasmosis Turns Your Bowels into a Twisted Maze by Dinner, Brett A., Charley, Ericka, Leff, Phillip, Barvo, Matthew M., Lee, Robert, Chuang, Keng-Yu

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Understanding β -Hairpin Formation by Dinner, Aaron R., Lazaridis, Themis, Karplus, Martin

“…The kinetics of formation of protein structural motifs (e.g., α -helices and β -hairpins) can provide information about the early events in protein folding. A…”
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Uracil-DNA glycosylase acts by substrate autocatalysis by Blackburn, G. Michael, Dinner, Aaron R, Karplus, Martin

“…In humans, uracil appears in DNA at the rate of several hundred bases per cell each day as a result of misincorporation of deoxyuridine (dU) or deamination of…”
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Defining cooperativity in gene regulation locally through intrinsic noise by Maienschein-Cline, M, Warmflash, A, Dinner, A R

“…Regulatory networks in cells may comprise a variety of types of molecular interactions. The most basic are pairwise interactions, in which one species controls…”
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Atomistic Understanding of Kinetic Pathways for Single Base-Pair Binding and Unbinding in DNA by Hagan, Michael F., Dinner, Aaron R., Chandler, David, Chakraborty, Arup K.

“…We combine free-energy calculations and molecular dynamics to elucidate a mechanism for DNA base-pair binding and unbinding in atomic detail. Specifically,…”
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The roles of stability and contact order in determining protein folding rates by Karplus, Martin, Dinner, Aaron R

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Is protein unfolding the reverse of protein folding? A lattice simulation analysis by Dinner, A R, Karplus, M

“…Simulations and experiments that monitor protein unfolding under denaturing conditions are commonly employed to study the mechanism by which a protein folds to…”
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The Folding Mechanism of Larger Model Proteins: Role of Native Structure by Dinner, Aaron R., Šali, Andrej, Karplus, Martin

“…The folding mechanism of a 125-bead heteropolymer model for proteins is investigated with Monte Carlo simulations on a cubic lattice. Sequences that do and do…”
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Understanding protein folding via free-energy surfaces from theory and experiment by Dinner, Aaron R, Šali, Andrej, Smith, Lorna J, Dobson, Christopher M, Karplus, Martin

“…The ability of protein molecules to fold into their highly structured functional states is one of the most remarkable evolutionary achievements of biology. In…”
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Factors that affect the folding ability of proteins by Dinner, Aaron R., Abkevich, Victor, Shakhnovich, Eugene, Karplus, Martin

“…The folding ability of a heteropolymer model for proteins subject to Monte Carlo dynamics on a simple cubic lattice is shown to be strongly correlated with the…”
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