Search Results - "Diamond, Scott"
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Systems Analysis of Thrombus Formation
Published in Circulation research (29-04-2016)“…The systems analysis of thrombosis seeks to quantitatively predict blood function in a given vascular wall and hemodynamic context. Relevant to both venous and…”
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2
Fibrin Modulates Shear-Induced NETosis in Sterile Occlusive Thrombi Formed under Haemodynamic Flow
Published in Thrombosis and haemostasis (01-04-2019)“…Neutrophils can release extracellular traps (NETs) in infectious, inflammatory and thrombotic diseases. NETs have been detected in deep vein thrombosis,…”
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3
Platelet Dynamics in Three-Dimensional Simulation of Whole Blood
Published in Biophysical journal (03-06-2014)“…A high-fidelity computational model using a 3D immersed boundary method is used to study platelet dynamics in whole blood. We focus on the 3D effects of the…”
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4
Reduced model to predict thrombin and fibrin during thrombosis on collagen/tissue factor under venous flow: Roles of γ'-fibrin and factor XIa
Published in PLoS computational biology (01-08-2019)“…During thrombosis, thrombin generates fibrin, however fibrin reversibly binds thrombin with low affinity E-domain sites (KD = 2.8 μM) and high affinity…”
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5
Sensitivity analysis of a reduced model of thrombosis under flow: Roles of Factor IX, Factor XI, and γ'-Fibrin
Published in PloS one (23-11-2021)“…A highly reduced extrinsic pathway coagulation model (8 ODEs) under flow considered a thin 15-micron platelet layer where transport limitations were largely…”
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6
A human platelet calcium calculator trained by pairwise agonist scanning
Published in PLoS computational biology (01-02-2015)“…Since platelet intracellular calcium mobilization [Ca(t)]i controls granule release, cyclooxygenase-1 and integrin activation, and phosphatidylserine exposure,…”
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7
Predicting risk for trauma patients using static and dynamic information from the MIMIC III database
Published in PloS one (19-01-2022)“…Risk quantification algorithms in the ICU can provide (1) an early alert to the clinician that a patient is at extreme risk and (2) help manage limited…”
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Establishing the Transient Mass Balance of Thrombosis: From Tissue Factor to Thrombin to Fibrin Under Venous Flow
Published in Arteriosclerosis, thrombosis, and vascular biology (01-07-2018)“…OBJECTIVE—We investigated the coregulation of thrombin and fibrin as blood flows over a procoagulant surface. APPROACH AND RESULTS—Using microfluidic perfusion…”
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Using the National Trauma Data Bank (NTDB) and machine learning to predict trauma patient mortality at admission
Published in PloS one (17-11-2020)“…A 400-estimator gradient boosting classifier was trained to predict survival probabilities of trauma patients. The National Trauma Data Bank (NTDB) provided…”
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10
Hierarchical organization in the hemostatic response and its relationship to the platelet-signaling network
Published in Blood (07-03-2013)“…Achieving hemostasis following vascular injury requires the rapid accumulation of platelets and fibrin. Here we used a combination of confocal intravital…”
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A three-dimensional multiscale model for the prediction of thrombus growth under flow with single-platelet resolution
Published in PLoS computational biology (01-01-2022)“…Modeling thrombus growth in pathological flows allows evaluation of risk under patient-specific pharmacological, hematological, and hemodynamical conditions…”
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12
Investigating thrombin-loaded fibrin in whole blood clot microfluidic assay via fluorogenic peptide
Published in Biophysical journal (21-02-2023)“…During clotting under flow, thrombin rapidly generates fibrin, whereas fibrin potently sequesters thrombin. This co-regulation was studied using microfluidic…”
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13
When Flow Goes Slow, von Willebrand Factor Can Bind Red Blood Cells
Published in Arteriosclerosis, thrombosis, and vascular biology (01-09-2017)Get full text
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14
Contact activation of blood coagulation on a defined kaolin/collagen surface in a microfluidic assay
Published in Thrombosis research (01-12-2014)“…Abstract Generation of active Factor XII (FXIIa) triggers blood clotting on artificial surfaces and may also enhance intravascular thrombosis. We developed a…”
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15
Ex vivo recapitulation of trauma-induced coagulopathy and preliminary assessment of trauma patient platelet function under flow using microfluidic technology
Published in The journal of trauma and acute care surgery (01-03-2016)“…Relevant to trauma-induced coagulopathy diagnostics, microfluidic assays allow controlled hemodynamics for testing of platelet and coagulation function using…”
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Systems biology of coagulation initiation: kinetics of thrombin generation in resting and activated human blood
Published in PLoS computational biology (01-09-2010)“…Blood function defines bleeding and clotting risks and dictates approaches for clinical intervention. Independent of adding exogenous tissue factor (TF), human…”
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17
Direct Observation of von Willebrand Factor Elongation and Fiber Formation on Collagen During Acute Whole Blood Exposure to Pathological Flow
Published in Arteriosclerosis, thrombosis, and vascular biology (01-01-2013)“…OBJECTIVE—In severe stenosis, von Willebrand Factor (vWF) experiences millisecond exposures to pathological wall shear rates (γw). We sought to evaluate the…”
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18
Blood Clots Are Rapidly Assembled Hemodynamic Sensors: Flow Arrest Triggers Intraluminal Thrombus Contraction
Published in Arteriosclerosis, thrombosis, and vascular biology (01-12-2012)“…OBJECTIVE—Blood clots form under flow during intravascular thrombosis or vessel leakage. Prevailing hemodynamics influence thrombus structure and may regulate…”
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FXIa and platelet polyphosphate as therapeutic targets during human blood clotting on collagen/tissue factor surfaces under flow
Published in Blood (17-09-2015)“…Factor XIIa (FXIIa) and factor XIa (FXIa) contribute to thrombosis in animal models, whereas platelet-derived polyphosphate (polyP) may potentiate contact or…”
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Platelet dysfunction during trauma involves diverse signaling pathways and an inhibitory activity in patient-derived plasma
Published in The journal of trauma and acute care surgery (01-02-2019)“…Trauma-induced coagulopathy occurs in about 25% of injured patients and accounts for about 10% of deaths worldwide. Upon injury, hemostatic function may…”
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