Search Results - "Desai, Jigar S"

Warm nights disrupt transcriptome rhythms in field-grown rice panicles by Desai, Jigar S., Lawas, Lovely Mae F., Valente, Ashlee M., Leman, Adam R., Grinevich, Dmitry O., Jagadish, S. V. Krishna, Doherty, Colleen J.

“…In rice, a small increase in nighttime temperature reduces grain yield and quality. How warm nighttime temperatures (WNT) produce these detrimental effects is…”
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Improving Gene Regulatory Network Inference by Incorporating Rates of Transcriptional Changes by Desai, Jigar S., Sartor, Ryan C., Lawas, Lovely Mae, Jagadish, S. V. Krishna, Doherty, Colleen J.

“…Organisms respond to changes in their environment through transcriptional regulatory networks (TRNs). The regulatory hierarchy of these networks can be…”
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Neural Net Classification Combined With Movement Analysis to Evaluate Setaria viridis as a Model System for Time of Day of Anther Appearance by Desai, Jigar S, Slabaugh, Erin, Liebelt, Donna J, Fredenberg, Jacob D, Gray, Benjamin N, Jagadish, S V Krishna, Wilkins, Olivia, Doherty, Colleen J

“…In many plant species, the time of day at which flowers open to permit pollination is tightly regulated. Proper time of flower opening, or Time of Day of…”
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Novel transcriptional responses to heat revealed by turning up the heat at night by Grinevich, Dmitry O., Desai, Jigar S., Stroup, Kevin P., Duan, Jiaqi, Slabaugh, Erin, Doherty, Colleen J.

“…Key message The circadian clock controls many molecular activities, impacting experimental interpretation. We quantify the genome-wide effects of time-of-day…”
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New candidate loci and marker genes on chromosome 7 for improved chilling tolerance in sorghum by Moghimi, Naghmeh, Desai, Jigar S, Bheemanahalli, Raju, Impa, Somayanda M, Vennapusa, Amaranatha Reddy, Sebela, David, Perumal, Ramasamy, Doherty, Colleen J, Jagadish, S V Krishna

“…Sorghum is often exposed to suboptimal low temperature stress under field conditions, particularly at the seedling establishment stage. Enhancing chilling…”
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Analysis of differential gene expression and alternative splicing is significantly influenced by choice of reference genome by Slabaugh, Erin, Desai, Jigar S, Sartor, Ryan C, Lawas, Lovely Mae F, Jagadish, S V Krishna, Doherty, Colleen J

“…RNA-seq analysis has enabled the evaluation of transcriptional changes in many species including nonmodel organisms. However, in most species only a single…”
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