Search Results - "Decker, Jared E."

Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle by Decker, Jared E, McKay, Stephanie D, Rolf, Megan M, Kim, Jaewoo, Molina Alcalá, Antonio, Sonstegard, Tad S, Hanotte, Olivier, Götherström, Anders, Seabury, Christopher M, Praharani, Lisa, Babar, Masroor Ellahi, Correia de Almeida Regitano, Luciana, Yildiz, Mehmet Ali, Heaton, Michael P, Liu, Wan-Sheng, Lei, Chu-Zhao, Reecy, James M, Saif-Ur-Rehman, Muhammad, Schnabel, Robert D, Taylor, Jeremy F

“…The domestication and development of cattle has considerably impacted human societies, but the histories of cattle breeds and populations have been poorly…”
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Genome-wide association analyses identify genotype-by-environment interactions of growth traits in Simmental cattle by Braz, Camila U., Rowan, Troy N., Schnabel, Robert D., Decker, Jared E.

“…Understanding genotype-by-environment interactions (G × E) is crucial to understand environmental adaptation in mammals and improve the sustainability of…”
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Genome-wide association and genotype by environment interactions for growth traits in U.S. Red Angus cattle by Smith, Johanna L, Wilson, Miranda L, Nilson, Sara M, Rowan, Troy N, Schnabel, Robert D, Decker, Jared E, Seabury, Christopher M

“…Abstract Background Genotypic information produced from single nucleotide polymorphism (SNP) arrays has routinely been used to identify genomic regions…”
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Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle by Rowan, Troy N, Durbin, Harly J, Seabury, Christopher M, Schnabel, Robert D, Decker, Jared E

“…Selection on complex traits can rapidly drive evolution, especially in stressful environments. This polygenic selection does not leave intense sweep signatures…”
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New World cattle show ancestry from multiple independent domestication events by McTavish, Emily Jane, Decker, Jared E, Schnabel, Robert D, Taylor, Jeremy F, Hillis, David M

“…Previous archeological and genetic research has shown that modern cattle breeds are descended from multiple independent domestication events of the wild…”
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Genome-wide association study for feed efficiency and growth traits in U.S. beef cattle by Seabury, Christopher M, Oldeschulte, David L, Saatchi, Mahdi, Beever, Jonathan E, Decker, Jared E, Halley, Yvette A, Bhattarai, Eric K, Molaei, Maral, Freetly, Harvey C, Hansen, Stephanie L, Yampara-Iquise, Helen, Johnson, Kristen A, Kerley, Monty S, Kim, JaeWoo, Loy, Daniel D, Marques, Elisa, Neibergs, Holly L, Schnabel, Robert D, Shike, Daniel W, Spangler, Matthew L, Weaber, Robert L, Garrick, Dorian J, Taylor, Jeremy F

“…Single nucleotide polymorphism (SNP) arrays for domestic cattle have catalyzed the identification of genetic markers associated with complex traits for…”
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Uncovering the architecture of selection in two Bos taurus cattle breeds by Rowan, Troy N., Schnabel, Robert D., Decker, Jared E.

“…Directional selection alters the genome via hard sweeps, soft sweeps, and polygenic selection. However, mapping polygenic selection is difficult because it…”
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Candidate lethal haplotypes and causal mutations in Angus cattle by Hoff, Jesse L, Decker, Jared E, Schnabel, Robert D, Taylor, Jeremy F

“…If unmanaged, high rates of inbreeding in livestock populations adversely impact their reproductive fitness. In beef cattle, historical selection strategies…”
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Agricultural Genomics: Commercial Applications Bring Increased Basic Research Power by Decker, Jared E

“…  Genomic prediction, whether using the estimated effects of variants merged with independently estimated merits based on phenotype and pedigree (multi-step)…”
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Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle by Smith, Johanna L, Wilson, Miranda L, Nilson, Sara M, Rowan, Troy N, Oldeschulte, David L, Schnabel, Robert D, Decker, Jared E, Seabury, Christopher M

“…Single nucleotide polymorphism (SNP) arrays have facilitated discovery of genetic markers associated with complex traits in domestic cattle; thereby enabling…”
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Early cave art and ancient DNA record the origin of European bison by Soubrier, Julien, Gower, Graham, Chen, Kefei, Richards, Stephen M., Llamas, Bastien, Mitchell, Kieren J., Ho, Simon Y. W., Kosintsev, Pavel, Lee, Michael S. Y., Baryshnikov, Gennady, Bollongino, Ruth, Bover, Pere, Burger, Joachim, Chivall, David, Crégut-Bonnoure, Evelyne, Decker, Jared E., Doronichev, Vladimir B., Douka, Katerina, Fordham, Damien A., Fontana, Federica, Fritz, Carole, Glimmerveen, Jan, Golovanova, Liubov V., Groves, Colin, Guerreschi, Antonio, Haak, Wolfgang, Higham, Tom, Hofman-Kamińska, Emilia, Immel, Alexander, Julien, Marie-Anne, Krause, Johannes, Krotova, Oleksandra, Langbein, Frauke, Larson, Greger, Rohrlach, Adam, Scheu, Amelie, Schnabel, Robert D., Taylor, Jeremy F., Tokarska, Małgorzata, Tosello, Gilles, van der Plicht, Johannes, van Loenen, Ayla, Vigne, Jean-Denis, Wooley, Oliver, Orlando, Ludovic, Kowalczyk, Rafał, Shapiro, Beth, Cooper, Alan

“…The two living species of bison (European and American) are among the few terrestrial megafauna to have survived the late Pleistocene extinctions. Despite the…”
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A multi-breed reference panel and additional rare variants maximize imputation accuracy in cattle by Rowan, Troy N, Hoff, Jesse L, Crum, Tamar E, Taylor, Jeremy F, Schnabel, Robert D, Decker, Jared E

“…During the last decade, the use of common-variant array-based single nucleotide polymorphism (SNP) genotyping in the beef and dairy industries has produced an…”
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Development of a genetic evaluation for hair shedding in American Angus cattle to improve thermotolerance by Durbin, Harly J, Lu, Duc, Yampara-Iquise, Helen, Miller, Stephen P, Decker, Jared E

“…Heat stress and fescue toxicosis caused by ingesting tall fescue infected with the endophytic fungus Epichloë coenophiala represent two of the most prevalent…”
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Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation by Saatchi, Mahdi, McClure, Mathew C, McKay, Stephanie D, Rolf, Megan M, Kim, JaeWoo, Decker, Jared E, Taxis, Tasia M, Chapple, Richard H, Ramey, Holly R, Northcutt, Sally L, Bauck, Stewart, Woodward, Brent, Dekkers, Jack C M, Fernando, Rohan L, Schnabel, Robert D, Garrick, Dorian J, Taylor, Jeremy F

“…Genomic selection is a recently developed technology that is beginning to revolutionize animal breeding. The objective of this study was to estimate marker…”
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Analysis of polygenic selection in purebred and crossbred pig genomes using generation proxy selection mapping by Grohmann, Caleb J, Shull, Caleb M, Crum, Tamar E, Schwab, Clint, Safranski, Timothy J, Decker, Jared E

“…Abstract Background Artificial selection on quantitative traits using breeding values and selection indices in commercial livestock breeding populations causes…”
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Genetic ancestry, admixture, and population structure in rural Dominica by Keith, Monica H, Flinn, Mark V, Durbin, Harly J, Rowan, Troy N, Blomquist, Gregory E, Taylor, Kristen H, Taylor, Jeremy F, Decker, Jared E

“…The Caribbean is a genetically diverse region with heterogeneous admixture compositions influenced by local island ecologies, migrations, colonial conflicts,…”
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CRUMBLER: A tool for the prediction of ancestry in cattle by Crum, Tamar E, Schnabel, Robert D, Decker, Jared E, Regitano, Luciana C A, Taylor, Jeremy F

“…In many beef and some dairy production systems, crossbreeding is used to take advantage of breed complementarity and heterosis. Admixed animals are frequently…”
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QTL-mapping and genomic prediction for bovine respiratory disease in U.S. Holsteins using sequence imputation and feature selection by Hoff, Jesse L, Decker, Jared E, Schnabel, Robert D, Seabury, Christopher M, Neibergs, Holly L, Taylor, Jeremy F

“…National genetic evaluations for disease resistance do not exist, precluding the genetic improvement of cattle for these traits. We imputed BovineHD genotypes…”
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Correction to: Development of a genetic evaluation for hair shedding in American Angus cattle to improve thermotolerance by Durbin, Harly J, Lu, Duc, Yampara-Iquise, Helen, Miller, Stephen P, Decker, Jared E

“…An amendment to this paper has been published and can be accessed via the original article…”
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Taurine and Indicine Haplotype Representation in Advanced Generation Individuals From Three American Breeds by Crum, Tamar E., Schnabel, Robert D., Decker, Jared E., Taylor, Jeremy F.

“…Development of the American Breeds of beef cattle began in the 1920s as breeders and U. S. Experiment Station researchers began to create Bos taurus taurus ×…”
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