Search Results - "Decker, Jared"
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1
Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle
Published in PLoS genetics (01-03-2014)“…The domestication and development of cattle has considerably impacted human societies, but the histories of cattle breeds and populations have been poorly…”
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2
Powerful detection of polygenic selection and evidence of environmental adaptation in US beef cattle
Published in PLoS genetics (22-07-2021)“…Selection on complex traits can rapidly drive evolution, especially in stressful environments. This polygenic selection does not leave intense sweep signatures…”
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3
Agricultural Genomics: Commercial Applications Bring Increased Basic Research Power
Published in PLoS genetics (01-11-2015)“… Genomic prediction, whether using the estimated effects of variants merged with independently estimated merits based on phenotype and pedigree (multi-step)…”
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4
Early cave art and ancient DNA record the origin of European bison
Published in Nature communications (18-10-2016)“…The two living species of bison (European and American) are among the few terrestrial megafauna to have survived the late Pleistocene extinctions. Despite the…”
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Genome-wide association analyses identify genotype-by-environment interactions of growth traits in Simmental cattle
Published in Scientific reports (25-06-2021)“…Understanding genotype-by-environment interactions (G × E) is crucial to understand environmental adaptation in mammals and improve the sustainability of…”
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Genome-wide association and genotype by environment interactions for growth traits in U.S. Red Angus cattle
Published in BMC genomics (16-07-2022)“…Abstract Background Genotypic information produced from single nucleotide polymorphism (SNP) arrays has routinely been used to identify genomic regions…”
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7
New World cattle show ancestry from multiple independent domestication events
Published in Proceedings of the National Academy of Sciences - PNAS (09-04-2013)“…Previous archeological and genetic research has shown that modern cattle breeds are descended from multiple independent domestication events of the wild…”
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8
Feralization: Confronting the Complexity of Domestication and Evolution
Published in Trends in genetics (01-04-2021)“…Feral populations, those which successfully persist outside of cultivation or husbandry, provide unique opportunities to study the genomic impacts of…”
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9
Accuracies of genomic breeding values in American Angus beef cattle using K-means clustering for cross-validation
Published in Genetics selection evolution (Paris) (28-11-2011)“…Genomic selection is a recently developed technology that is beginning to revolutionize animal breeding. The objective of this study was to estimate marker…”
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10
The Evolutionary History of Wild, Domesticated, and Feral Brassica oleracea (Brassicaceae)
Published in Molecular biology and evolution (01-10-2021)“…Abstract Understanding the evolutionary history of crops, including identifying wild relatives, helps to provide insight for conservation and crop breeding…”
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11
Genome-wide association study for feed efficiency and growth traits in U.S. beef cattle
Published in BMC genomics (18-05-2017)“…Single nucleotide polymorphism (SNP) arrays for domestic cattle have catalyzed the identification of genetic markers associated with complex traits for…”
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12
Uncovering the architecture of selection in two Bos taurus cattle breeds
Published in Evolutionary applications (01-02-2024)“…Directional selection alters the genome via hard sweeps, soft sweeps, and polygenic selection. However, mapping polygenic selection is difficult because it…”
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13
Candidate lethal haplotypes and causal mutations in Angus cattle
Published in BMC genomics (18-10-2017)“…If unmanaged, high rates of inbreeding in livestock populations adversely impact their reproductive fitness. In beef cattle, historical selection strategies…”
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14
Genetic ancestry, admixture, and population structure in rural Dominica
Published in PloS one (03-11-2021)“…The Caribbean is a genetically diverse region with heterogeneous admixture compositions influenced by local island ecologies, migrations, colonial conflicts,…”
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Genome-wide association and genotype by environment interactions for growth traits in U.S. Gelbvieh cattle
Published in BMC genomics (04-12-2019)“…Single nucleotide polymorphism (SNP) arrays have facilitated discovery of genetic markers associated with complex traits in domestic cattle; thereby enabling…”
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CRUMBLER: A tool for the prediction of ancestry in cattle
Published in PloS one (26-08-2019)“…In many beef and some dairy production systems, crossbreeding is used to take advantage of breed complementarity and heterosis. Admixed animals are frequently…”
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17
Holsteins are the genomic selection poster cows
Published in Proceedings of the National Academy of Sciences - PNAS (12-07-2016)Get full text
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Detection of selective sweeps in cattle using genome-wide SNP data
Published in BMC genomics (07-06-2013)“…The domestication and subsequent selection by humans to create breeds and biological types of cattle undoubtedly altered the patterning of variation within…”
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High-Throughput and Accurate 3D Scanning of Cattle Using Time-of-Flight Sensors and Deep Learning
Published in Sensors (Basel, Switzerland) (14-08-2024)“…We introduce a high-throughput 3D scanning system designed to accurately measure cattle phenotypes. This scanner employs an array of depth sensors, i.e.,…”
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A multi-breed reference panel and additional rare variants maximize imputation accuracy in cattle
Published in Genetics selection evolution (Paris) (26-12-2019)“…During the last decade, the use of common-variant array-based single nucleotide polymorphism (SNP) genotyping in the beef and dairy industries has produced an…”
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