Search Results - "Dailu Guan"

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    Evidence Supporting a Role of Alternative Splicing Participates in Melon ( Cucumis melo L.) Fruit Ripening by Wang, Wenjiao, Wei, Yuping, Xu, Zhaoying, Shen, Chengcheng, Li, Ang, Guan, Dailu, Zhang, Xuejun, Liu, Bin

    “…One key post-transcriptional modification mechanism that dynamically controls a number of physiological processes in plants is alternative splicing (AS)…”
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    Mapping and functional characterization of structural variation in 1060 pig genomes by Yang, Liu, Yin, Hongwei, Bai, Lijing, Yao, Wenye, Tao, Tan, Zhao, Qianyi, Gao, Yahui, Teng, Jinyan, Xu, Zhiting, Lin, Qing, Diao, Shuqi, Pan, Zhangyuan, Guan, Dailu, Li, Bingjie, Zhou, Huaijun, Zhou, Zhongyin, Zhao, Fuping, Wang, Qishan, Pan, Yuchun, Zhang, Zhe, Li, Kui, Fang, Lingzhao, Liu, George E

    Published in Genome Biology (07-05-2024)
    “…Structural variations (SVs) have significant impacts on complex phenotypes by rearranging large amounts of DNA sequence. We present a comprehensive SV catalog…”
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    Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing by Guan, Dailu, Halstead, Michelle M., Islas-Trejo, Alma D., Goszczynski, Daniel E., Cheng, Hans H., Ross, Pablo J., Zhou, Huaijun

    Published in Frontiers in genetics (03-10-2022)
    “…To identify and annotate transcript isoforms in the chicken genome, we generated Nanopore long-read sequencing data from 68 samples that encompassed 19 diverse…”
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    A protein-coding gene expression atlas from the brain of pregnant and non-pregnant goats by Luigi-Sierra, María Gracia, Guan, Dailu, López-Béjar, Manel, Casas, Encarna, Olvera-Maneu, Sergi, Gardela, Jaume, Palomo, María Jesús, Osuagwuh, Uchebuchi Ike, Ohaneje, Uchechi Linda, Mármol-Sánchez, Emilio, Amills, Marcel

    Published in Frontiers in genetics (14-07-2023)
    “…The brain is an extraordinarily complex organ with multiple anatomical structures involved in highly specialized functions related with behavior and…”
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    Variability in porcine microRNA genes and its association with mRNA expression and lipid phenotypes by Mármol-Sánchez, Emilio, Luigi-Sierra, María Gracia, Castelló, Anna, Guan, Dailu, Quintanilla, Raquel, Tonda, Raul, Amills, Marcel

    Published in Genetics selection evolution (Paris) (04-05-2021)
    “…Mature microRNAs (miRNAs) play an important role in repressing the expression of a wide range of mRNAs. The presence of polymorphic sites in miRNA genes and…”
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    Evolution of inbreeding: a gaze into five Italian beef cattle breeds history by Rovelli, Giacomo, Luigi-Sierra, Maria Gracia, Guan, Dailu, Sbarra, Fiorella, Quaglia, Andrea, Sarti, Francesca Maria, Amills, Marcel, Lasagna, Emiliano

    Published in PeerJ (San Francisco, CA) (27-09-2021)
    “…In the last decades, intensive selection programs have led to sustained increases of inbreeding in dairy cattle, a feature that might have adverse consequences…”
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    A genome-wide analysis of copy number variation in Murciano-Granadina goats by Guan, Dailu, Martínez, Amparo, Castelló, Anna, Landi, Vincenzo, Luigi-Sierra, María Gracia, Fernández-Álvarez, Javier, Cabrera, Betlem, Delgado, Juan Vicente, Such, Xavier, Jordana, Jordi, Amills, Marcel

    Published in Genetics selection evolution (Paris) (08-08-2020)
    “…In this work, our aim was to generate a map of the copy number variations (CNV) segregating in a population of Murciano-Granadina goats, the most important…”
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    Learning functional conservation between human and pig to decipher evolutionary mechanisms underlying gene expression and complex traits by Li, Jinghui, Zhao, Tianjing, Guan, Dailu, Pan, Zhangyuan, Bai, Zhonghao, Teng, Jinyan, Zhang, Zhe, Zheng, Zhili, Zeng, Jian, Zhou, Huaijun, Fang, Lingzhao, Cheng, Hao

    Published in Cell genomics (11-10-2023)
    “…Assessment of genomic conservation between humans and pigs at the functional level can improve the potential of pigs as a human biomedical model. To address…”
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    Sustainable natural bioresources in crop protection: antimicrobial hydroxycoumarins induce membrane depolarization‐associated changes in the transcriptome of Ralstonia solanacearum by Yang, Liang, Guan, Dailu, Valls, Marc, Ding, Wei

    Published in Pest management science (01-11-2021)
    “…BACKGROUND Ralstonia solanacearum is one of the most devastating pathogens affecting crop production worldwide. The hydroxycoumarins (umbelliferone, esculetin…”
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    Short communication: Comparing the microbiota diversity from the core, middle part and rind of six Spanish commercial goat cheeses by Luigi-Sierra, Maria G., Ramayo-Caldas, Yuliaxis, Guan, Dailu, Amills, Marcel

    Published in Livestock science (01-07-2024)
    “…•Cheese core and rind provide different ecosystems for microbial growth.•We have sequenced the microbiome of the core, middle part, and rind from 6 Spanish…”
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    Scanning of selection signature provides a glimpse into important economic traits in goats (Capra hircus) by Guan, Dailu, Luo, Nanjian, Tan, Xiaoshan, Zhao, Zhongquan, Huang, Yongfu, Na, Risu, Zhang, Jiahua, Zhao, Yongju

    Published in Scientific reports (31-10-2016)
    “…Goats ( Capra hircus ) are one of the oldest livestock domesticated species, and have been used for their milk, meat, hair and skins over much of the world…”
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    Age-dependent genetic architectures of chicken body weight explored by multidimensional GWAS and molQTL analyses by Zhong, Conghao, Li, Xiaochang, Guan, Dailu, Zhang, Boxuan, Wang, Xiqiong, Qu, Liang, Zhou, Huaijun, Fang, Lingzhao, Sun, Congjiao, Yang, Ning

    Published in Journal of genetics and genomics (19-09-2024)
    “…Chicken body weight (BW) is a critical trait in breeding. Although genetic variants associated with BW have been investigated by genome-wide association…”
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    A compendium of genetic regulatory effects across pig tissues by Teng, Jinyan, Gao, Yahui, Yin, Hongwei, Bai, Zhonghao, Liu, Shuli, Zeng, Haonan, Bai, Lijing, Cai, Zexi, Zhao, Bingru, Li, Xiujin, Xu, Zhiting, Lin, Qing, Pan, Zhangyuan, Yang, Wenjing, Yu, Xiaoshan, Guan, Dailu, Hou, Yali, Keel, Brittney N., Rohrer, Gary A., Lindholm-Perry, Amanda K., Oliver, William T., Ballester, Maria, Crespo-Piazuelo, Daniel, Quintanilla, Raquel, Canela-Xandri, Oriol, Rawlik, Konrad, Xia, Charley, Yao, Yuelin, Zhao, Qianyi, Yao, Wenye, Yang, Liu, Li, Houcheng, Zhang, Huicong, Liao, Wang, Chen, Tianshuo, Karlskov-Mortensen, Peter, Fredholm, Merete, Amills, Marcel, Clop, Alex, Giuffra, Elisabetta, Wu, Jun, Cai, Xiaodian, Diao, Shuqi, Pan, Xiangchun, Wei, Chen, Li, Jinghui, Cheng, Hao, Wang, Sheng, Su, Guosheng, Sahana, Goutam, Lund, Mogens Sandø, Dekkers, Jack C. M., Kramer, Luke, Tuggle, Christopher K., Corbett, Ryan, Groenen, Martien A. M., Madsen, Ole, Gòdia, Marta, Rocha, Dominique, Charles, Mathieu, Li, Cong-jun, Pausch, Hubert, Hu, Xiaoxiang, Luo, Yonglun, Lin, Lin, Zhou, Zhongyin, Zhang, Zhe, Chen, Zitao, Cui, Leilei, Xiang, Ruidong, Shen, Xia, Li, Pinghua, Huang, Ruihua, Tang, Guoqing, Li, Mingzhou, Zhao, Yunxiang, Yi, Guoqiang, Tang, Zhonglin, Jiang, Jicai, Zhao, Fuping, Yuan, Xiaolong, Liu, Xiaohong, Chen, Yaosheng, Xu, Xuewen, Zhao, Shuhong, Zhao, Pengju, Haley, Chris, Zhou, Huaijun, Wang, Qishan, Pan, Yuchun, Ding, Xiangdong, Ma, Li, Navarro, Pau, Zhang, Qin, Li, Bingjie, Tenesa, Albert, Li, Kui, Liu, George E., Zhang, Zhe, Fang, Lingzhao

    Published in Nature genetics (01-01-2024)
    “…The Farm Animal Genotype-Tissue Expression (FarmGTEx) project has been established to develop a public resource of genetic regulatory variants in livestock,…”
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    The landscape of long noncoding RNA expression in the goat brain by Varela-Martínez, Endika, Luigi-Sierra, María Gracia, Guan, Dailu, López-Béjar, Manel, Casas, Encarna, Olvera-Maneu, Sergi, Gardela, Jaume, Palomo, Maria Jesús, Osuagwuh, Uchebuchi Ike, Ohaneje, Uchechi Linda, Mármol-Sánchez, Emilio, Amills, Marcel

    Published in Journal of dairy science (01-06-2024)
    “…The list of standard abbreviations for JDS is available at adsa.org/jds-abbreviations-24. Nonstandard abbreviations are available in the Notes. The brain…”
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    Estimating the copy number of the agouti signaling protein (ASIP) gene in goat breeds with different color patterns by Guan, Dailu, Castelló, Anna, Luigi-Sierra, María Gracia, Landi, Vincenzo, Delgado, Juan Vicente, Martínez, Amparo, Amills, Marcel

    Published in Livestock science (01-04-2021)
    “…•Increased copy number of the ASIP gene might explain the white pigmentation of certain goat breeds.•We have estimated ASIP copy number in white and colored…”
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