Search Results - "Dailu Guan"
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Evidence Supporting a Role of Alternative Splicing Participates in Melon ( Cucumis melo L.) Fruit Ripening
Published in International journal of molecular sciences (28-05-2024)“…One key post-transcriptional modification mechanism that dynamically controls a number of physiological processes in plants is alternative splicing (AS)…”
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Enriched atlas of lncRNA and protein-coding genes for the GRCg7b chicken assembly and its functional annotation across 47 tissues
Published in Scientific reports (19-03-2024)“…Gene atlases for livestock are steadily improving thanks to new genome assemblies and new expression data improving the gene annotation. However, gene content…”
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3
Population structure and identification of genomic regions associated with productive traits in five Italian beef cattle breeds
Published in Scientific reports (12-04-2024)“…Italy has a long history in beef production, with local breeds such as Marchigiana, Chianina, Romagnola, Maremmana, and Podolica which produce high-quality…”
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Mapping and functional characterization of structural variation in 1060 pig genomes
Published in Genome Biology (07-05-2024)“…Structural variations (SVs) have significant impacts on complex phenotypes by rearranging large amounts of DNA sequence. We present a comprehensive SV catalog…”
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Prediction of transcript isoforms in 19 chicken tissues by Oxford Nanopore long-read sequencing
Published in Frontiers in genetics (03-10-2022)“…To identify and annotate transcript isoforms in the chicken genome, we generated Nanopore long-read sequencing data from 68 samples that encompassed 19 diverse…”
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A protein-coding gene expression atlas from the brain of pregnant and non-pregnant goats
Published in Frontiers in genetics (14-07-2023)“…The brain is an extraordinarily complex organ with multiple anatomical structures involved in highly specialized functions related with behavior and…”
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Variability in porcine microRNA genes and its association with mRNA expression and lipid phenotypes
Published in Genetics selection evolution (Paris) (04-05-2021)“…Mature microRNAs (miRNAs) play an important role in repressing the expression of a wide range of mRNAs. The presence of polymorphic sites in miRNA genes and…”
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Evolution of inbreeding: a gaze into five Italian beef cattle breeds history
Published in PeerJ (San Francisco, CA) (27-09-2021)“…In the last decades, intensive selection programs have led to sustained increases of inbreeding in dairy cattle, a feature that might have adverse consequences…”
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A genome-wide analysis of copy number variation in Murciano-Granadina goats
Published in Genetics selection evolution (Paris) (08-08-2020)“…In this work, our aim was to generate a map of the copy number variations (CNV) segregating in a population of Murciano-Granadina goats, the most important…”
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10
Learning functional conservation between human and pig to decipher evolutionary mechanisms underlying gene expression and complex traits
Published in Cell genomics (11-10-2023)“…Assessment of genomic conservation between humans and pigs at the functional level can improve the potential of pigs as a human biomedical model. To address…”
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Genomic patterns of homozygosity and inbreeding depression in Murciano-Granadina goats
Published in Journal of animal science and biotechnology (10-03-2022)“…Inbreeding depression can adversely affect traits related to fitness, reproduction and productive performance. Although current research suggests that…”
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Analyzing the genomic and transcriptomic architecture of milk traits in Murciano-Granadina goats
Published in Journal of animal science and biotechnology (11-03-2020)“…In this study, we aimed to investigate the molecular basis of lactation as well as to identify the genetic factors that influence milk yield and composition in…”
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Sustainable natural bioresources in crop protection: antimicrobial hydroxycoumarins induce membrane depolarization‐associated changes in the transcriptome of Ralstonia solanacearum
Published in Pest management science (01-11-2021)“…BACKGROUND Ralstonia solanacearum is one of the most devastating pathogens affecting crop production worldwide. The hydroxycoumarins (umbelliferone, esculetin…”
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Short communication: Comparing the microbiota diversity from the core, middle part and rind of six Spanish commercial goat cheeses
Published in Livestock science (01-07-2024)“…•Cheese core and rind provide different ecosystems for microbial growth.•We have sequenced the microbiome of the core, middle part, and rind from 6 Spanish…”
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Scanning of selection signature provides a glimpse into important economic traits in goats (Capra hircus)
Published in Scientific reports (31-10-2016)“…Goats ( Capra hircus ) are one of the oldest livestock domesticated species, and have been used for their milk, meat, hair and skins over much of the world…”
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Age-dependent genetic architectures of chicken body weight explored by multidimensional GWAS and molQTL analyses
Published in Journal of genetics and genomics (19-09-2024)“…Chicken body weight (BW) is a critical trait in breeding. Although genetic variants associated with BW have been investigated by genome-wide association…”
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A compendium of genetic regulatory effects across pig tissues
Published in Nature genetics (01-01-2024)“…The Farm Animal Genotype-Tissue Expression (FarmGTEx) project has been established to develop a public resource of genetic regulatory variants in livestock,…”
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18
The landscape of long noncoding RNA expression in the goat brain
Published in Journal of dairy science (01-06-2024)“…The list of standard abbreviations for JDS is available at adsa.org/jds-abbreviations-24. Nonstandard abbreviations are available in the Notes. The brain…”
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Estimating the copy number of the agouti signaling protein (ASIP) gene in goat breeds with different color patterns
Published in Livestock science (01-04-2021)“…•Increased copy number of the ASIP gene might explain the white pigmentation of certain goat breeds.•We have estimated ASIP copy number in white and colored…”
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A genome-wide association analysis for body, udder, and leg conformation traits recorded in Murciano-Granadina goats
Published in Journal of dairy science (01-12-2020)“…Morphological traits are of great importance to dairy goat production given their effect on phenotypes of economic interest. However, their underlying genomic…”
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