Search Results - "Dai, Dongjuan"

Critical evaluation of short, long, and hybrid assembly for contextual analysis of antibiotic resistance genes in complex environmental metagenomes by Brown, Connor L., Keenum, Ishi M., Dai, Dongjuan, Zhang, Liqing, Vikesland, Peter J., Pruden, Amy

“…In the fight to limit the global spread of antibiotic resistance, the assembly of environmental metagenomes has the potential to provide rich contextual…”
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Factors Shaping the Human Exposome in the Built Environment: Opportunities for Engineering Control by Dai, Dongjuan, Prussin, Aaron J, Marr, Linsey C, Vikesland, Peter J, Edwards, Marc A, Pruden, Amy

“…The “exposome” is a term describing the summation of one’s lifetime exposure to microbes and chemicals. Such exposures are now recognized as major drivers of…”
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Long-read metagenomic sequencing reveals shifts in associations of antibiotic resistance genes with mobile genetic elements from sewage to activated sludge by Dai, Dongjuan, Brown, Connor, Bürgmann, Helmut, Larsson, D G Joakim, Nambi, Indumathi, Zhang, Tong, Flach, Carl-Fredrik, Pruden, Amy, Vikesland, Peter J

“…There is concern that the microbially rich activated sludge environment of wastewater treatment plants (WWTPs) may contribute to the dissemination of…”
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Interactive effects of temperature, organic carbon, and pipe material on microbiota composition and Legionella pneumophila in hot water plumbing systems by Proctor, Caitlin R, Dai, Dongjuan, Edwards, Marc A, Pruden, Amy

“…Several biotic and abiotic factors have been reported to influence the proliferation of microbes, including Legionella pneumophila, in hot water premise…”
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Shotgun Metagenomics Reveals Taxonomic and Functional Shifts in Hot Water Microbiome Due to Temperature Setting and Stagnation by Dai, Dongjuan, Rhoads, William J, Edwards, Marc A, Pruden, Amy

“…Hot water premise plumbing has emerged as a critical nexus of energy, water, and public health. The composition of hot water microbiomes is of special interest…”
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A dynamic and complex monochloramine stress response in Escherichia coli revealed by transcriptome analysis by Holder, Diane, Berry, David, Dai, Dongjuan, Raskin, Lutgarde, Xi, Chuanwu

“…Despite the widespread use of monochloramine in drinking water treatment, there is surprisingly little information about its mode of action. In this study, DNA…”
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Porous biocarrier-enhanced biodegradation of crude oil contaminated soil by Liang, Yuting, Zhang, Xu, Dai, Dongjuan, Li, Guanghe

“…Soil contamination with crude oil from petrochemicals and oil exploitation is an important worldwide issue. Comparing available remediation techniques,…”
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Separation of the bacterial species, Escherichia coli, from mixed-species microbial communities for transcriptome analysis by Dai, Dongjuan, Holder, Diane, Raskin, Lutgarde, Xi, Chuanwu

“…The study of bacterial species interactions in a mixed-species community can be facilitated by transcriptome analysis of one species in the community using…”
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Bayesian network expansion identifies new ROS and biofilm regulators by Hodges, Andrew P, Dai, Dongjuan, Xiang, Zuoshuang, Woolf, Peter, Xi, Chuanwu, He, Yongqun

“…Signaling and regulatory pathways that guide gene expression have only been partially defined for most organisms. However, given the increasing number of…”
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Early Detection of Severe Acute Respiratory Syndrome Coronavirus 2 Variants Using Traveler-based Genomic Surveillance at 4 US Airports, September 2021-January 2022 by Wegrzyn, Renee D, Appiah, Grace D, Morfino, Robert, Milford, Scott R, Walker, Allison Taylor, Ernst, Ezra T, Darrow, William W, Li, Siyao Lisa, Robison, Keith, MacCannell, Duncan, Dai, Dongjuan, Girinathan, Brintha P, Hicks, Allison L, Cosca, Bryan, Woronoff, Gabrielle, Plocik, Alex M, Simen, Birgitte B, Moriarty, Leah, Guagliardo, Sarah Anne J, Cetron, Martin S, Friedman, Cindy R

“…We enrolled arriving international air travelers in a severe acute respiratory syndrome coronavirus 2 genomic surveillance program. We used molecular testing…”
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Early detection of SARS-CoV-2 variants using traveler-based genomic surveillance at four US airports, September 2021- January 2022 by Wegrzyn, Renee D., Appiah, Grace D., Morfino, Robert, Milford, Scott R., Walker, Allison Taylor, Ernst, Ezra T., Darrow, William W., Li, Siyao Lisa, Robison, Keith, MacCannell, Duncan, Dai, Dongjuan, Girinathan, Brintha P., Hicks, Allison L., Cosca, Bryan, Woronoff, Gabrielle, Plocik, Alex M., Simen, Birgitte B., Moriarty, Leah, Guagliardo, Sarah Anne J., Cetron, Martin S., Friedman, Cindy R.

“…We enrolled arriving international air travelers in SARS-CoV-2 genomic surveillance, using molecular testing of pooled nasal swabs, and sequencing positive…”
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Evaluation of Preparedness and Recovery Needs of Private Well Users After the Great Louisiana Flood of 2016 by Gilliland, Aubrey E., Pieper, Kelsey J., Straif-Bourgeois, Susanne, Rhoads, William J., Dai, Dongjuan, Edwards, Marc, Brisolara, Kari, Olexia, Darcie, Katner, Adrienne

“…The August 2016 Louisiana flood marked the second 500-year flood in the state in 1 year. The aim of this study was to identify private well user needs in the…”
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1525. The Impact of Traveler-Based Genomic Surveillance on SARS-CoV-2 Variant Detection in Arriving International Air Travelers– United States, November 29, 2021-April 24, 2022 by Appiah, Grace D, Smith, Teresa C, Wegrzyn, Renee, Morfino, Robert C, Guagliardo, Sarah, Milford, Scott, Walker, Allison Taylor, Ernst, Ezra T, Darrow, William W, Li, Siyao Lisa, Aichele, Thomas, Rothstein, Andrew, Rome, Benjamin, MacCannell, Duncan, Woronoff, Gabrielle, Robison, Keith, Dai, Dongjuan, Girinathan, Brintha, Hicks, Allison, Cosca, Bryan, Plocik, Alex, Simen, Birgitte, Moriarty, Leah, Cetron, Martin S, Friedman, Cindy R

“…Abstract Background International travel facilitates SARS-CoV-2 spread globally. Early detection of variants among arriving international travelers could…”
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Multiphasic analysis of the temporal development of the distal gut microbiota in patients following ileal pouch anal anastomosis by Young, Vincent B, Raffals, Laura H, Huse, Susan M, Vital, Marius, Dai, Dongjuan, Schloss, Patrick D, Brulc, Jennifer M, Antonopoulos, Dionysios A, Arrieta, Rose L, Kwon, John H, Reddy, K Gautham, Hubert, Nathaniel A, Grim, Sharon L, Vineis, Joseph H, Dalal, Sushila, Morrison, Hilary G, Eren, A Murat, Meyer, Folker, Schmidt, Thomas M, Tiedje, James M, Chang, Eugene B, Sogin, Mitchell L

“…The indigenous gut microbiota are thought to play a crucial role in the development and maintenance of the abnormal inflammatory responses that are the…”
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The Effects and Genetic Mechanisms of Bacterial Species Interactions on Biofilm Formation by Dai, Dongjuan

“…Bacteria can increase their survival in stressed environments by forming sessile biofilms on surfaces. Natural ecosystems are usually occupied by multiple…”
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The Effects and Genetic Mechanisms of Bacterial Species Interactions on Biofilm Formation by Dai, Dongjuan

“…Bacteria can increase their survival in stressed environments by forming sessile biofilms on surfaces. Natural ecosystems are usually occupied by multiple…”
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