Search Results - "DEE, R"

Mutation rate variation in multicellular eukaryotes: causes and consequences by Baer, Charles F, Denver, Dee R, Miyamoto, Michael M

“…A basic knowledge about mutation rates is central to our understanding of a myriad of evolutionary phenomena, including the maintenance of sex and rates of…”
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Direct observation of transition paths during the folding of proteins and nucleic acids by Neupane, Krishna, Foster, Daniel A. N., Dee, Derek R., Yu, Hao, Wang, Feng, Woodside, Michael T.

“…Transition paths, the fleeting trajectories through the transition states that dominate the dynamics of biomolecular folding reactions, encapsulate the…”
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Structural insight into Escherichia coli CsgA amyloid fibril assembly by Bu, Fan, Dee, Derek R, Liu, Bin

“…The discovery of functional amyloids in bacteria dates back several decades, and our understanding of the curli biogenesis system has gradually expanded over…”
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Tissue factor–positive tumor microvesicles activate platelets and enhance thrombosis in mice by Geddings, J. E., Hisada, Y., Boulaftali, Y., Getz, T. M., Whelihan, M., Fuentes, R., Dee, R., Cooley, B. C., Key, N. S., Wolberg, A. S., Bergmeier, W., Mackman, N.

“…Essentials Cancer patients have a high rate of venous thrombosis (VT) but the underlying mechanisms are unknown. Tumor‐derived, tissue factor‐positive…”
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Protein misfolding occurs by slow diffusion across multiple barriers in a rough energy landscape by Yu, Hao, Derek R. Dee, Xia Liu, Angela M. Brigley, Iveta Sosova, Michael T. Woodside

“…The timescale for the microscopic dynamics of proteins during conformational transitions is set by the intrachain diffusion coefficient, D . Despite the…”
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Comparative Genomic Analysis of 130 Bacteriophages Infecting Bacteria in the Genus Pseudomonas by Ha, Anh D, Denver, Dee R

“…Bacteria of the genus are genetically diverse and ubiquitous in the environment. Like other bacteria, those of the genus are susceptible to bacteriophages…”
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Virtual microscopy in pathology education by Dee, Fred R., MD

“…Summary Technology for acquisition of virtual slides was developed in 1985; however, it was not until the late 1990s that desktop computers had enough…”
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First Report of the Gastropod-Killing Nematode, Phasmarhabditis californica, in Washington State, U.S.A by Mc Donnell, Rory J., K. Howe, Dana, R. Denver, Dee

“…, a commercially available biological control agent in England, Scotland, and Wales (Nemaslug 2.0 ®), was discovered for the first time in Washington State…”
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The genomic basis of parasitism in the Strongyloides clade of nematodes by Hunt, Vicky L, Tsai, Isheng J, Coghlan, Avril, Reid, Adam J, Holroyd, Nancy, Foth, Bernardo J, Tracey, Alan, Cotton, James A, Stanley, Eleanor J, Beasley, Helen, Bennett, Hayley M, Brooks, Karen, Harsha, Bhavana, Kajitani, Rei, Kulkarni, Arpita, Harbecke, Dorothee, Nagayasu, Eiji, Nichol, Sarah, Ogura, Yoshitoshi, Quail, Michael A, Randle, Nadine, Xia, Dong, Brattig, Norbert W, Soblik, Hanns, Ribeiro, Diogo M, Sanchez-Flores, Alejandro, Hayashi, Tetsuya, Itoh, Takehiko, Denver, Dee R, Grant, Warwick, Stoltzfus, Jonathan D, Lok, James B, Murayama, Haruhiko, Wastling, Jonathan, Streit, Adrian, Kikuchi, Taisei, Viney, Mark, Berriman, Matthew

“…Taisei Kikuchi, Mark Viney, Matthew Berriman and colleagues report the genome sequences of six species of nematodes from the Strongyloides clade of nematodes,…”
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Partially native intermediates mediate misfolding of SOD1 in single-molecule folding trajectories by Sen Mojumdar, Supratik, N. Scholl, Zackary, Dee, Derek R., Rouleau, Logan, Anand, Uttam, Garen, Craig, Woodside, Michael T.

“…Prion-like misfolding of superoxide dismutase 1 (SOD1) is associated with the disease ALS, but the mechanism of misfolding remains unclear, partly because…”
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Phylogenetic evidence for the invasion of a commercialized European Phasmarhabditis hermaphrodita lineage into North America and New Zealand by Howe, Dana K

“…Performs a phylogenetic analysis of nematode mitochondrial DNA (mtDNA) strains representing eight different Phasmarhabditis species, collected from nine…”
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Genomic evidence for plant-parasitic nematodes as the earliest Wolbachia hosts by Brown, Amanda M. V., Wasala, Sulochana K., Howe, Dana K., Peetz, Amy B., Zasada, Inga A., Denver, Dee R.

“…Wolbachia , one of the most widespread endosymbionts, is a target for biological control of mosquito-borne diseases (malaria and dengue virus), and antibiotic…”
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genome-wide view of Caenorhabditis elegans base-substitution mutation processes by Denver, Dee R, Dolan, Peter C, Wilhelm, Larry J, Sung, Way, Lucas-Lledó, J. Ignacio, Howe, Dana K, Lewis, Samantha C, Okamoto, Kazu, Thomas, W. Kelley, Lynch, Michael, Baer, Charles F

“…Knowledge of mutation processes is central to understanding virtually all evolutionary phenomena and the underlying nature of genetic disorders and cancers…”
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Transcription through the eye of a needle: daily and annual cyclic gene expression variation in Douglas-fir needles by Cronn, Richard, Dolan, Peter C, Jogdeo, Sanjuro, Wegrzyn, Jill L, Neale, David B, St Clair, J Bradley, Denver, Dee R

“…Perennial growth in plants is the product of interdependent cycles of daily and annual stimuli that induce cycles of growth and dormancy. In conifers, needles…”
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Genome Skimming: A Rapid Approach to Gaining Diverse Biological Insights into Multicellular Pathogens by Denver, Dee R, Brown, Amanda M V, Howe, Dana K, Peetz, Amy B, Zasada, Inga A

“…The N50 statistic, a common statistical measure for average length of a set of sequences (see S1 Text for more detail) was 8,863 bp on average for the six PPN…”
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Comparative Genomics of Wolbachia - Cardinium Dual Endosymbiosis in a Plant-Parasitic Nematode by Brown, Amanda M V, Wasala, Sulochana K, Howe, Dana K, Peetz, Amy B, Zasada, Inga A, Denver, Dee R

“…and are among the most important and widespread of all endosymbionts, occurring in nematodes and more than half of insect and arachnid species, sometimes as…”
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First report of a gastropod parasitic nematode Phasmarhabditis californica (Nematoda: Rhabditidae) in Alberta, Canada by Brophy, Taylor, Howe, Dana K., Denver, Dee R., Luong, Lien T.

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Cross-Species and Cross-Polymorph Seeding of Lysozyme Amyloid Reveals a Dominant Polymorph by Rahimi Araghi, Lida, Dee, Derek R.

“…The ability to self-propagate is one of the most intriguing characteristics of amyloid fibrils, and is a feature of great interest both to stopping unwanted…”
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A new approach towards climate monitoring in Rocky Mountain alpine plant communities: A case study using herb-chronology and Penstemon whippleanus by Dee, Justin R., Stambaugh, Michael C.

“…The alpine ecosystem of the Rocky Mountains is experiencing significant increases in growing season length, summer maximum temperatures, and shifting patterns…”
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Variable Abundance and Distribution of Wolbachia and Cardinium Endosymbionts in Plant-Parasitic Nematode Field Populations by Wasala, Sulochana K, Brown, Amanda M V, Kang, Jiwon, Howe, Dana K, Peetz, Amy B, Zasada, Inga A, Denver, Dee R

“…The bacterial endosymbiont interacts with different invertebrate hosts, engaging in diverse symbiotic relationships. is often a reproductive parasite in…”
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