Search Results - "Crowell, Kevin L"

LIQUID: an-open source software for identifying lipids in LC-MS/MS-based lipidomics data by Kyle, Jennifer E, Crowell, Kevin L, Casey, Cameron P, Fujimoto, Grant M, Kim, Sangtae, Dautel, Sydney E, Smith, Richard D, Payne, Samuel H, Metz, Thomas O

“…We introduce an open-source software, LIQUID, for semi-automated processing and visualization of LC-MS/MS-based lipidomics data. LIQUID provides users with the…”
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MultiAlign: a multiple LC-MS analysis tool for targeted omics analysis by LaMarche, Brian L, Crowell, Kevin L, Jaitly, Navdeep, Petyuk, Vladislav A, Shah, Anuj R, Polpitiya, Ashoka D, Sandoval, John D, Kiebel, Gary R, Monroe, Matthew E, Callister, Stephen J, Metz, Thomas O, Anderson, Gordon A, Smith, Richard D

“…MultiAlign is a free software tool that aligns multiple liquid chromatography-mass spectrometry datasets to one another by clustering mass and chromatographic…”
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An algorithm to correct saturated mass spectrometry ion abundances for enhanced quantitation and mass accuracy in omic studies by Bilbao, Aivett, Gibbons, Bryson C., Slysz, Gordon W., Crowell, Kevin L., Monroe, Matthew E., Ibrahim, Yehia M., Smith, Richard D., Payne, Samuel H., Baker, Erin S.

“…[Display omitted] •An open source computational method was created to correct saturated MS peaks.•This method flags peaks near saturation and uses theoretical…”
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Detecting and Removing Data Artifacts in Hadamard Transform Ion Mobility-Mass Spectrometry Measurements by Prost, Spencer A., Crowell, Kevin L., Baker, Erin S., Ibrahim, Yehia M., Clowers, Brian H., Monroe, Matthew E., Anderson, Gordon A., Smith, Richard D., Payne, Samuel H.

“…Applying Hadamard transform multiplexing to ion mobility separations (IMS) can significantly improve the signal-to-noise ratio and throughput for IMS coupled…”
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LC-IMS-MS Feature Finder: detecting multidimensional liquid chromatography, ion mobility and mass spectrometry features in complex datasets by Crowell, Kevin L, Slysz, Gordon W, Baker, Erin S, LaMarche, Brian L, Monroe, Matthew E, Ibrahim, Yehia M, Payne, Samuel H, Anderson, Gordon A, Smith, Richard D

“…The addition of ion mobility spectrometry to liquid chromatography-mass spectrometry experiments requires new, or updated, software tools to facilitate data…”
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Increasing confidence of LC–MS identifications by utilizing ion mobility spectrometry by Crowell, Kevin L., Baker, Erin S., Payne, Samuel H., Ibrahim, Yehia M., Monroe, Matthew E., Slysz, Gordon W., LaMarche, Brian L., Petyuk, Vladislav A., Piehowski, Paul D., Danielson, William F., Anderson, Gordon A., Smith, Richard D.

“…•Database created with mass, elution time, drift time, and charge state for peptides.•IMS provides a 3rd dimension of separation for increased confidence in…”
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Mixed-Isotope Labeling with LC-IMS-MS for Characterization of Protein–Protein Interactions by Chemical Cross-Linking by Merkley, Eric D., Baker, Erin S., Crowell, Kevin L., Orton, Daniel J., Taverner, Thomas, Ansong, Charles, Ibrahim, Yehia M., Burnet, Meagan C., Cort, John R., Anderson, Gordon A., Smith, Richard D., Adkins, Joshua N.

“…Chemical cross-linking of proteins followed by proteolysis and mass spectrometric analysis of the resulting cross-linked peptides provides powerful insight…”
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GlyQ-IQ: Glycomics Quintavariate-Informed Quantification with High-Performance Computing and GlycoGrid 4D Visualization by Kronewitter, Scott R, Slysz, Gordon W, Marginean, Ioan, Hagler, Clay D, LaMarche, Brian L, Zhao, Rui, Harris, Myanna Y, Monroe, Matthew E, Polyukh, Christina A, Crowell, Kevin L, Fillmore, Thomas L, Carlson, Timothy S, Camp, David G, Moore, Ronald J, Payne, Samuel H, Anderson, Gordon A, Smith, Richard D

“…Glycomics quintavariate-informed quantification (GlyQ-IQ) is a biologically guided glycomics analysis tool for identifying N-glycans in liquid…”
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An algorithm to correct saturated mass spectrometry ion abundances for enhanced quantitation and mass accuracy in omic studies by Bilbao, Aivett, Gibbons, Bryson C., Slysz, Gordon W., Crowell, Kevin L., Monroe, Matthew E., Ibrahim, Yehia M., Smith, Richard D., Payne, Samuel H., Baker, Erin S.

“…The mass accuracy and peak intensity of ions detected by mass spectrometry (MS) measurements are essential to facilitate compound identification and…”
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Advancing the High Throughput Identification of Liver Fibrosis Protein Signatures Using Multiplexed Ion Mobility Spectrometry by Baker, Erin Shammel, Burnum-Johnson, Kristin E., Jacobs, Jon M., Diamond, Deborah L., Brown, Roslyn N., Ibrahim, Yehia M., Orton, Daniel J., Piehowski, Paul D., Purdy, David E., Moore, Ronald J., Danielson, William F., Monroe, Matthew E., Crowell, Kevin L., Slysz, Gordon W., Gritsenko, Marina A., Sandoval, John D., LaMarche, Brian L., Matzke, Melissa M., Webb-Robertson, Bobbie-Jo M., Simons, Brenna C., McMahon, Brian J., Bhattacharya, Renuka, Perkins, James D., Carithers, Robert L., Strom, Susan, Self, Steven G., Katze, Michael G., Anderson, Gordon A., Smith, Richard D.

“…Rapid diagnosis of disease states using less invasive, safer, and more clinically acceptable approaches than presently employed is a crucial direction for the…”
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