Search Results - "Croken, Matthew McKnight"

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  1. 1

    Gene Set Enrichment Analysis (GSEA) of Toxoplasma gondii expression datasets links cell cycle progression and the bradyzoite developmental program by Croken, Matthew McKnight, Qiu, Weigang, White, Michael W, Kim, Kami

    Published in BMC genomics (24-06-2014)
    “…Large amounts of microarray expression data have been generated for the Apicomplexan parasite Toxoplasma gondii in an effort to identify genes critical for…”
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    Journal Article
  2. 2

    Genomic insights into host and parasite interactions during intracellular infection by Toxoplasma gondii by Netha Ulahannan, Ronald Cutler, Reanna Doña-Termine, Claudia A Simões-Pires, N Ari Wijetunga, Matthew McKnight Croken, Andrew D Johnston, Yu Kong, Shahina B Maqbool, Masako Suzuki, John M Greally

    Published in PloS one (30-09-2022)
    “…To gain insights into the molecular interactions of an intracellular pathogen and its host cell, we studied the gene expression and chromatin states of human…”
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    Journal Article
  3. 3

    Genomic insights into host and parasite interactions during intracellular infection by Toxoplasma gondii by Ulahannan, Netha, Cutler, Ronald, Doña-Termine, Reanna, Simões-Pires, Claudia A, Wijetunga, N Ari, Croken, Matthew McKnight, Johnston, Andrew D, Kong, Yu, Maqbool, Shahina B, Suzuki, Masako, Greally, John M

    Published in PloS one (30-09-2022)
    “…To gain insights into the molecular interactions of an intracellular pathogen and its host cell, we studied the gene expression and chromatin states of human…”
    Get full text
    Journal Article
  4. 4

    Distinct strains of Toxoplasma gondii feature divergent transcriptomes regardless of developmental stage by Croken, Matthew McKnight, Ma, Yanfen, Markillie, Lye Meng, Taylor, Ronald C, Orr, Galya, Weiss, Louis M, Kim, Kami

    Published in PloS one (13-11-2014)
    “…Using high through-put RNA sequencing, we assayed the transcriptomes of three different strains of Toxoplasma gondii representing three common genotypes under…”
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    Journal Article
  5. 5

    DNA repair in species with extreme lifespan differences by MacRae, Sheila L, Croken, Matthew McKnight, Calder, R B, Aliper, Alexander, Milholland, Brandon, White, Ryan R, Zhavoronkov, Alexander, Gladyshev, Vadim N, Seluanov, Andrei, Gorbunova, Vera, Zhang, Zhengdong D, Vijg, Jan

    Published in Aging (Albany, NY.) (01-12-2015)
    “…Differences in DNA repair capacity have been hypothesized to underlie the great range of maximum lifespans among mammals. However, measurements of individual…”
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    Journal Article
  6. 6

    toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research by Rhee, David B, Croken, Matthew McKnight, Shieh, Kevin R, Sullivan, Julie, Micklem, Gos, Kim, Kami, Golden, Aaron

    “…Toxoplasma gondii (T. gondii) is an obligate intracellular parasite that must monitor for changes in the host environment and respond accordingly; however, it…”
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    Journal Article
  7. 7

    New Approaches and Insights into the Gene Expression of Toxoplasma gondii by Croken, Matthew McKnight

    Published 01-01-2014
    “…Toxoplasma gondii is an intracellular parasite. Each strain of the parasite has phenotypic differences relating to virulence, host preference, and competence…”
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    Dissertation
  8. 8

    Distinct Strains of Toxoplasma gondii Feature Divergent Transcriptomes Regardless of Developmental Stage: e111297 by Croken, Matthew McKnight, Ma, Yanfen, Markillie, Lye Meng, Taylor, Ronald C, Orr, Galya, Weiss, Louis M, Kim, Kami

    Published in PloS one (01-11-2014)
    “…Using high through-put RNA sequencing, we assayed the transcriptomes of three different strains of Toxoplasma gondii representing three common genotypes under…”
    Get full text
    Journal Article