Search Results - "Cramer, Grant R"

Effects of abiotic stress on plants: a systems biology perspective by Cramer, Grant R, Urano, Kaoru, Delrot, Serge, Pezzotti, Mario, Shinozaki, Kazuo

“…The natural environment for plants is composed of a complex set of abiotic stresses and biotic stresses. Plant responses to these stresses are equally complex…”
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Water deficit alters differentially metabolic pathways affecting important flavor and quality traits in grape berries of Cabernet Sauvignon and Chardonnay by Deluc, Laurent G, Quilici, David R, Decendit, Alain, Grimplet, Jérôme, Wheatley, Matthew D, Schlauch, Karen A, Mérillon, Jean-Michel, Cushman, John C, Cramer, Grant R

“…Water deficit has significant effects on grape berry composition resulting in improved wine quality by the enhancement of color, flavors, or aromas. While some…”
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VviERF6Ls: an expanded clade in Vitis responds transcriptionally to abiotic and biotic stresses and berry development by Toups, Haley S, Cochetel, Noé, Gray, Dennis, Cramer, Grant R

“…VviERF6Ls are an uncharacterized gene clade in Vitis with only distant Arabidopsis orthologs. Preliminary data indicated these transcription factors may play a…”
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A sense of place: transcriptomics identifies environmental signatures in Cabernet Sauvignon berry skins in the late stages of ripening by Cramer, Grant R, Cochetel, Noé, Ghan, Ryan, Destrac-Irvine, Agnès, Delrot, Serge

“…Grape berry ripening is influenced by climate, the main component of the "terroir" of a place. Light and temperature are major factors in the vineyard that…”
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Transcriptomic analysis of the late stages of grapevine (Vitis vinifera cv. Cabernet Sauvignon) berry ripening reveals significant induction of ethylene signaling and flavor pathways in the skin by Cramer, Grant R, Ghan, Ryan, Schlauch, Karen A, Tillett, Richard L, Heymann, Hildegarde, Ferrarini, Alberto, Delledonne, Massimo, Zenoni, Sara, Fasoli, Marianna, Pezzotti, Mario

“…Grapevine berry, a nonclimacteric fruit, has three developmental stages; the last one is when berry color and sugar increase. Flavors derived from terpenoid…”
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Drought tolerance of the grapevine, Vitis champinii cv. Ramsey, is associated with higher photosynthesis and greater transcriptomic responsiveness of abscisic acid biosynthesis and signaling by Cochetel, Noé, Ghan, Ryan, Toups, Haley S, Degu, Asfaw, Tillett, Richard L, Schlauch, Karen A, Cramer, Grant R

“…Grapevine is an economically important crop for which yield and berry quality is strongly affected by climate change. Large variations in drought tolerance…”
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Metabolite and transcript profiling of berry skin during fruit development elucidates differential regulation between Cabernet Sauvignon and Shiraz cultivars at branching points in the polyphenol pathway by Degu, Asfaw, Hochberg, Uri, Sikron, Noga, Venturini, Luca, Buson, Genny, Ghan, Ryan, Plaschkes, Inbar, Batushansky, Albert, Chalifa-Caspi, Vered, Mattivi, Fulvio, Delledonne, Massimo, Pezzotti, Mario, Rachmilevitch, Shimon, Cramer, Grant R, Fait, Aaron

“…Grapevine berries undergo complex biochemical changes during fruit maturation, many of which are dependent upon the variety and its environment. In order to…”
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Transcriptomic response is more sensitive to water deficit in shoots than roots of Vitis riparia (Michx.) by Khadka, Vedbar Singh, Vaughn, Kimberley, Xie, Juan, Swaminathan, Padmapriya, Ma, Qin, Cramer, Grant R, Fennell, Anne Y

“…Drought is an important constraint on grapevine sustainability. Vitis riparia, widely used in rootstock and scion breeding, has been studied in isolated leaf…”
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Transcriptomic and metabolite analyses of Cabernet Sauvignon grape berry development by Deluc, Laurent G, Grimplet, Jérôme, Wheatley, Matthew D, Tillett, Richard L, Quilici, David R, Osborne, Craig, Schooley, David A, Schlauch, Karen A, Cushman, John C, Cramer, Grant R

“…Grape berry development is a dynamic process that involves a complex series of molecular genetic and biochemical changes divided into three major phases…”
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Genes expressed in grapevine leaves reveal latent wood infection by the fungal pathogen Neofusicoccum parvum by Czemmel, Stefan, Galarneau, Erin R, Travadon, Renaud, McElrone, Andrew J, Cramer, Grant R, Baumgartner, Kendra

“…Some pathogenic species of the Botryosphaeriaceae have a latent phase, colonizing woody tissues while perennial hosts show no apparent symptoms until…”
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The common transcriptional subnetworks of the grape berry skin in the late stages of ripening by Ghan, Ryan, Petereit, Juli, Tillett, Richard L, Schlauch, Karen A, Toubiana, David, Fait, Aaron, Cramer, Grant R

“…Wine grapes are important economically in many countries around the world. Defining the optimum time for grape harvest is a major challenge to the grower and…”
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Tissue-specific mRNA expression profiling in grape berry tissues by Grimplet, Jerome, Deluc, Laurent G, Tillett, Richard L, Wheatley, Matthew D, Schlauch, Karen A, Cramer, Grant R, Cushman, John C

“…Berries of grape (Vitis vinifera) contain three major tissue types (skin, pulp and seed) all of which contribute to the aroma, color, and flavor characters of…”
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Compatible GLRaV-3 viral infections affect berry ripening decreasing sugar accumulation and anthocyanin biosynthesis in Vitis vinifera by Vega, Andrea, Gutiérrez, Rodrigo A., Peña-Neira, Alvaro, Cramer, Grant R., Arce-Johnson, Patricio

“…Virus infections in grapevine cause important economic losses and affect fruit quality worldwide. Although the phenotypic symptoms associated to viral…”
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VitisNet: “Omics” Integration through Grapevine Molecular Networks by Grimplet, Jérôme, Cramer, Grant R, Dickerson, Julie A, Mathiason, Kathy, Van Hemert, John, Fennell, Anne Y

“…Background: Genomic data release for the grapevine has increased exponentially in the last five years. The Vitis vinifera genome has been sequenced and Vitis…”
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Proteomic and selected metabolite analysis of grape berry tissues under well-watered and water-deficit stress conditions by Grimplet, Jérôme, Wheatley, Matthew D, Jouira, Hatem Ben, Deluc, Laurent G, Cramer, Grant R, Cushman, John C

“…In order to investigate the unique contribution of individual wine grape (Vitis vinifera) berry tissues and water-deficit to wine quality traits, a survey of…”
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Identification of tissue-specific, abiotic stress-responsive gene expression patterns in wine grape (Vitis vinifera L.) based on curation and mining of large-scale EST data sets by Tillett, Richard L, Ergül, Ali, Albion, Rebecca L, Schlauch, Karen A, Cramer, Grant R, Cushman, John C

“…Background Abiotic stresses, such as water deficit and soil salinity, result in changes in physiology, nutrient use, and vegetative growth in vines, and…”
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Characterizing the Grape Transcriptome. Analysis of Expressed Sequence Tags from Multiple Vitis Species and Development of a Compendium of Gene Expression during Berry Development by da Silva, Francisco Goes, Iandolino, Alberto, Al-Kayal, Fadi, Bohlmann, Marlene C, Cushman, Mary Ann, Lim, Hyunju, Ergul, Ali, Figueroa, Rubi, Kabuloglu, Elif K, Osborne, Craig, Rowe, Joan, Tattersall, Elizabeth, Leslie, Anna, Xu, Jane, Baek, JongMin, Cramer, Grant R, Cushman, John C, Cook, Douglas R

“…We report the analysis and annotation of 146,075 expressed sequence tags from Vitis species. The majority of these sequences were derived from different…”
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Phased diploid genome assembly with single-molecule real-time sequencing by Chin, Chen-Shan, Peluso, Paul, Sedlazeck, Fritz J, Nattestad, Maria, Concepcion, Gregory T, Clum, Alicia, Dunn, Christopher, O'Malley, Ronan, Figueroa-Balderas, Rosa, Morales-Cruz, Abraham, Cramer, Grant R, Delledonne, Massimo, Luo, Chongyuan, Ecker, Joseph R, Cantu, Dario, Rank, David R, Schatz, Michael C

“…The open-source FALCON and FALCON-Unzip software utilize long-read sequencing data to generate contiguous, accurate and phased diploid assemblies, even from…”
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Polyphenolic responses of grapevine berries to light, temperature, oxidative stress, abscisic acid and jasmonic acid show specific developmental-dependent degrees of metabolic resilience to perturbation by Degu, Asfaw, Ayenew, Biruk, Cramer, Grant R., Fait, Aaron

“…•The extent of metabolite alteration in response to stress was developmental stage-dependent.•Greater magnitudes of metabolite fluctuations characterize the…”
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Cultivar specific metabolic changes in grapevines berry skins in relation to deficit irrigation and hydraulic behavior by Hochberg, Uri, Degu, Asfaw, Cramer, Grant R., Rachmilevitch, Shimon, Fait, Aaron

“…Deficit irrigation techniques are widely used in commercial vineyards. Nevertheless, varieties respond differently to water availability, prompting the need to…”
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