Search Results - "Crain, P."

The RNA Modification Database: 1999 update by Rozenski, Jef, Crain, Pamela F., McCloskey, James A.

“…The RNA Modification Database (http://medlib.med.utah.edu/RNAmods/) provides a comprehensive listing of naturally modified nucleosides in RNA. Each file…”
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Fish habitat use response to anthropogenic induced changes of physical processes in the Elwha estuary, Washington, USA by Shaffer, J. Anne, Beirne, M, Ritchie, T, Paradis, R, Barry, D, Crain, P

“…The Elwha River estuary has been significantly influenced by anthropogenic changes to the river, including two large dams upriver and rock dikes installed in…”
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Erratum to: Fish habitat use response to anthropogenic induced changes of physical processes in the Elwha estuary, Washington, USA by Shaffer, J. Anne, Beirne, M., Ritchie, T., Paradis, R., Barry, D., Crain, P.

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Summary: the modified nucleosides of RNA by Limbach, Patrick A., Crain, Pamela F., McCloskey, James A.

“…A comprehensive listing is made of posttranscriptionally modified nucleosides from RNA reported in the literature through mid-1994. Included are chemical…”
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SYTO11 staining vs FISH staining: a comparison of two methods to stain Wolbachia pipientis in cell cultures by Venard, C.M.-P, Crain, P.R, Dobson, S.L

“…Aims: The Aedes albopictus C7-10 cell line was infected with Wolbachia strains wRi and wAlbB to create C7-10R and C7-10B cell lines, respectively. We compared…”
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Variation in Condition Factor and Growth in Young-of-Year Fishes in Floodplain and Riverine Habitats of the Cosumnes River, California by Ribeiro, F, Crain, P. K, Moyle, P. B

“…Condition factors and growth rates of postlarval (young-of-year) fishes in a Central California river were compared in order to determine the relative…”
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Pro-anorexia and pro-recovery photo sharing: a tale of two warring tribes by Yom-Tov, Elad, Fernandez-Luque, Luis, Weber, Ingmar, Crain, Steven P

“…There is widespread use of the Internet to promote anorexia as a lifestyle choice. Pro-anorexia content can be harmful for people affected or at risk of having…”
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Matrix-assisted laser desorption/ionization mass spectrometry of nucleic acids with wavelengths in the ultraviolet and infrared by Nordhoff, E, Ingendoh, A, Cramer, R, Overberg, A, Stahl, B, Karas, M, Hillenkamp, F, Crain, P F

“…A number of different matrices have been tested and compared for ultraviolet and infrared (UV and IR) matrix-assisted laser desorption/ionization (MALDI) of…”
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Formation of 8-hydroxyguanine moiety in cellular DNA by agents producing oxygen radicals and evidence for its repair by Kasai, H, Crain, P F, Kuchino, Y, Nishimura, S, Ootsuyama, A, Tanooka, H

“…8-Hydroxydeoxyguanosine (8-OH-dG) was detected in DNA isolated from HeLa cells after the cells in tissue culture had been irradiated with X-rays and from the…”
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Identities and Phylogenetic Comparisons of Posttranscriptional Modifications in 16 S Ribosomal RNA from Haloferax volcanii by Kowalak, Jeffrey A., Bruenger, Eveline, Crain, Pamela F., McCloskey, James A.

“…Small subunit (16 S) rRNA from the archaeonHaloferax volcanii, for which sites of modification were previously reported, was examined using mass spectrometry…”
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A Truncated Aminoacyl-tRNA Synthetase Modifies RNA by Salazar, Juan C., Ambrogelly, Alexandre, Crain, Pamela F., McCloskey, James A., Söll, Dieter

“…Aminoacyl-tRNA synthetases are modular enzymes composed of a central active site domain to which additional functional domains were appended in the course of…”
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Codon reading patterns in Drosophila melanogaster mitochondria based on their tRNA sequences: a unique wobble rule in animal mitochondria by Tomita, K, Ueda, T, Ishiwa, S, Crain, P.F, McCloskey, J.A, Watanabe, K

“…Mitochondrial (mt) tRNATrp, tRNAlle, tRNAMet, tRNASerGCU, tRNAAsn and tRNALys were purified from Drosophila melanogaster (fruit fly) and their nucleotide…”
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Posttranscriptional modification of tRNA in thermophilic archaea (Archaebacteria) by EDMONDS, C. G, CRAIN, P. F, RAMESH GUPTA, HASHIZUME, T, HOCART, C. H, KOWALAK, J. A, POMERANTZ, S. C, STETTER, K. O, MCCLOSKEY, J. A

“…Article Usage Stats Services JB Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Prenylated Proteins: The Structure of the Isoprenoid Group by Rilling, H. C., Breunger, E., Epstein, W. W., Crain, P. F.

“…The mevalonate-derived portion of a prenylated protein from Chinese hamster ovary cells has been established as diterpenoid (C$_{20}$). This group is linked to…”
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Post-transcriptional modification in archaeal tRNAs: identities and phylogenetic relations of nucleotides from mesophilic and hyperthermophilic Methanococcales by McCloskey, J A, Graham, D E, Zhou, S, Crain, P F, Ibba, M, Konisky, J, Söll, D, Olsen, G J

“…Post-transcriptional modifications in archaeal RNA are known to be phylogenetically distinct but relatively little is known of tRNA from the Methanococci, a…”
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beta-D-glucosyl-hydroxymethyluracil: a novel modified base present in the DNA of the parasitic protozoan T. brucei by Gommers-Ampt, J H, Van Leeuwen, F, de Beer, A L, Vliegenthart, J F, Dizdaroglu, M, Kowalak, J A, Crain, P F, Borst, P

“…We have previously shown that the DNA of the unicellular eukaryote T. brucei contains about 0.1% of a novel modified base, called J. The presence of J…”
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Mass spectrometry of mRNA cap 4 from trypanosomatids reveals two novel nucleosides by BANGS, J. D, CRAIN, P. F, HASHIZUME, T, MCCLOSKEY, J. A, BOOTHROYD, J. C

“…Synthesis of mRNA in kinetoplastid protozoa involves the process of trans-splicing, in which an identical 39-41-nucleotide (depending on the species) mini-exon…”
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Restoring native fish assemblages to a regulated California stream using the natural flow regime concept by Kiernan, Joseph D, Moyle, Peter B, Crain, Patrick K

“…We examined the response of fishes to establishment of a new flow regime in lower Putah Creek, a regulated stream in California, USA. The new flow regime was…”
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RNA modification database, RNAMDB: 2011 update by Cantara, William A, Crain, Pamela F, Rozenski, Jef, McCloskey, James A, Harris, Kimberly A, Zhang, Xiaonong, Vendeix, Franck A.P, Fabris, Daniele, Agris, Paul F

“…Since its inception in 1994, The RNA Modification Database (RNAMDB, http://rna-mdb.cas.albany.edu/RNAmods/) has served as a focal point for information…”
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Presence and location of modified nucleotides in Escherichia coli tmRNA: structural mimicry with tRNA acceptor branches by Felden, Brice, Hanawa, Kyoko, Atkins, John F., Himeno, Hyouta, Muto, Akira, Gesteland, Raymond F., McCloskey, James A., Crain, Pamela F.

“…Escherichia coli tmRNA functions uniquely as both tRNA and mRNA and possesses structural elements similar to canonical tRNAs. To test whether this mimicry…”
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