Search Results - "Coyte, Katharine Z."

Understanding Competition and Cooperation within the Mammalian Gut Microbiome by Coyte, Katharine Z., Rakoff-Nahoum, Seth

“…The mammalian gut harbors a vast community of microorganisms — termed the microbiota — whose composition and dynamics are considered to be critical drivers of…”
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The ecology of the microbiome: Networks, competition, and stability by Coyte, Katharine Z., Schluter, Jonas, Foster, Kevin R.

“…The human gut harbors a large and complex community of beneficial microbes that remain stable over long periods. This stability is considered critical for good…”
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The evolution of the host microbiome as an ecosystem on a leash by Foster, Kevin R., Schluter, Jonas, Coyte, Katharine Z., Rakoff-Nahoum, Seth

“…The human body carries vast communities of microbes that provide many benefits. Our microbiome is complex and challenging to understand, but evolutionary…”
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Multi-kingdom ecological drivers of microbiota assembly in preterm infants by Rao, Chitong, Coyte, Katharine Z., Bainter, Wayne, Geha, Raif S., Martin, Camilia R., Rakoff-Nahoum, Seth

“…The gut microbiota of preterm infants develops predictably 1 – 7 , with pioneer species colonizing the gut after birth, followed by an ordered succession of…”
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Ecological rules for the assembly of microbiome communities by Coyte, Katharine Z, Rao, Chitong, Rakoff-Nahoum, Seth, Foster, Kevin R

“…Humans and many other hosts establish a diverse community of beneficial microbes anew each generation. The order and identity of incoming symbionts is critical…”
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Reactivity of complex communities can be more important than stability by Yang, Yuguang, Coyte, Katharine Z., Foster, Kevin R., Li, Aming

“…Understanding stability—whether a community will eventually return to its original state after a perturbation—is a major focus in the study of various complex…”
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Horizontal gene transfer and ecological interactions jointly control microbiome stability by Coyte, Katharine Z, Stevenson, Cagla, Knight, Christopher G, Harrison, Ellie, Hall, James P J, Brockhurst, Michael A

“…Genes encoding resistance to stressors, such as antibiotics or environmental pollutants, are widespread across microbiomes, often encoded on mobile genetic…”
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Microbial competition in porous environments can select against rapid biofilm growth by Coyte, Katharine Z., Tabuteau, Hervé, Gaffney, Eamonn A., Foster, Kevin R., Durham, William M.

“…Microbes often live in dense communities called biofilms, where competition between strains and species is fundamental to both evolution and community…”
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Microbial communities as dynamical systems by Gonze, Didier, Coyte, Katharine Z, Lahti, Leo, Faust, Karoline

“…[Display omitted] •Ordination plots visualize movement through community space.•Generalized Lotka–Volterra (gLV) model predicts stability and responses to…”
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When microbes go missing: Understanding the impact of diversity loss within the gut microbiome by Sprockett, Daniel D, Coyte, Katharine Z

“…Two recent papers published in Cell highlight the power of both top-down and bottom-up approaches to understanding the gut microbiome. The first uses…”
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Strain-level fitness in the gut microbiome is an emergent property of glycans and a single metabolite by Park, Sun-Yang, Rao, Chitong, Coyte, Katharine Z., Kuziel, Gavin A., Zhang, Yancong, Huang, Wentao, Franzosa, Eric A., Weng, Jing-Ke, Huttenhower, Curtis, Rakoff-Nahoum, Seth

“…The human gut microbiota resides within a diverse chemical environment challenging our ability to understand the forces shaping this ecosystem. Here, we reveal…”
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Time delays modulate the stability of complex ecosystems by Yang, Yuguang, Foster, Kevin R., Coyte, Katharine Z., Li, Aming

“…What drives the stability, or instability, of complex ecosystems? This question sits at the heart of community ecology and has motivated a large body of…”
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Understanding the development and function of the gut microbiota in health and inflammation by Selvakumar, Deepak, Evans, Dolan, Coyte, Katharine Z, McLaughlin, John, Brass, Andy, Hancock, Laura, Cruickshank, Sheena

“…The gut microbiota is known to play an important role in maintaining gut health through a symbiotic relationship with the host. Altered gut microbiota is a…”
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REPLY TO BAVEYE AND DARNAULT: Useful models are simple and extendable by Coyte, Katharine Z., Tabuteau, Hervé, Gaffney, Eamonn A., Foster, Kevin R., Durham, William M.

“…Baveye and Darnault (2) contend that our model (3) is too simple and that we should have considered more intricate biofilm distributions and other microbes…”
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The Impact of Peri-Transplant Antibiotic Exposure on Outcomes in Children Undergoing Allogeneic Hematopoietic Stem Cell Transplantation by Alawdah, Laila, Coyte, Katharine Z., Lehmann, Leslie E., Flett, Kelly, Whangbo, Jennifer, Rakoff-Nahoum, Seth

“…Survival after allogeneic hematopoietic stem cell transplantation (ASCT) has significantly improved with early recognition of sepsis and prompt empiric…”
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