Search Results - "Copeland, Julia K"

Seasonal community succession of the phyllosphere microbiome by Copeland, Julia K, Yuan, Lijie, Layeghifard, Mehdi, Wang, Pauline W, Guttman, David S

“…The leaf microbiome is influenced by both biotic and abiotic factors. Currently, we know little about the relative importance of these factors in determining…”
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Gut Microbial Metabolism Drives Transformation of Msh2-Deficient Colon Epithelial Cells by Belcheva, Antoaneta, Irrazabal, Thergiory, Robertson, Susan J., Streutker, Catherine, Maughan, Heather, Rubino, Stephen, Moriyama, Eduardo H., Copeland, Julia K., Surendra, Anu, Kumar, Sachin, Green, Blerta, Geddes, Kaoru, Pezo, Rossanna C., Navarre, William W., Milosevic, Michael, Wilson, Brian C., Girardin, Stephen E., Wolever, Thomas M.S., Edelmann, Winfried, Guttman, David S., Philpott, Dana J., Martin, Alberto

“…The etiology of colorectal cancer (CRC) has been linked to deficiencies in mismatch repair and adenomatous polyposis coli (APC) proteins, diet, inflammatory…”
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Gut-associated IgA+ immune cells regulate obesity-related insulin resistance by Luck, Helen, Khan, Saad, Kim, Justin H., Copeland, Julia K., Revelo, Xavier S., Tsai, Sue, Chakraborty, Mainak, Cheng, Kathleen, Tao Chan, Yi, Nøhr, Mark K., Clemente-Casares, Xavier, Perry, Marie-Christine, Ghazarian, Magar, Lei, Helena, Lin, Yi-Hsuan, Coburn, Bryan, Okrainec, Allan, Jackson, Timothy, Poutanen, Susan, Gaisano, Herbert, Allard, Johane P., Guttman, David S., Conner, Margaret E., Winer, Shawn, Winer, Daniel A.

“…The intestinal immune system is emerging as an important contributor to obesity-related insulin resistance, but the role of intestinal B cells in this context…”
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Regulation of Obesity-Related Insulin Resistance with Gut Anti-inflammatory Agents by Luck, Helen, Tsai, Sue, Chung, Jason, Clemente-Casares, Xavier, Ghazarian, Magar, Revelo, Xavier S., Lei, Helena, Luk, Cynthia T., Shi, Sally Yu, Surendra, Anuradha, Copeland, Julia K., Ahn, Jennifer, Prescott, David, Rasmussen, Brittany A., Chng, Melissa Hui Yen, Engleman, Edgar G., Girardin, Stephen E., Lam, Tony K.T., Croitoru, Kenneth, Dunn, Shannon, Philpott, Dana J., Guttman, David S., Woo, Minna, Winer, Shawn, Winer, Daniel A.

“…Obesity has reached epidemic proportions, but little is known about its influence on the intestinal immune system. Here we show that the gut immune system…”
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Metabolic Reprogramming by Hexosamine Biosynthetic and Golgi N-Glycan Branching Pathways by Ryczko, Michael C., Pawling, Judy, Chen, Rui, Abdel Rahman, Anas M., Yau, Kevin, Copeland, Julia K., Zhang, Cunjie, Surendra, Anu, Guttman, David S., Figeys, Daniel, Dennis, James W.

“…De novo uridine-diphosphate-N-acetylglucosamine (UDP-GlcNAc) biosynthesis requires glucose, glutamine, acetyl-CoA and uridine, however GlcNAc salvaged from…”
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A practical assessment of nano-phosphate on soybean (Glycine max) growth and microbiome establishment by McKnight, Michelle M., Qu, Zhi, Copeland, Julia K., Guttman, David S., Walker, Virginia K.

“…The efficacy of needle-shaped nano-hydroxyapatite (nHA; Ca 10 (PO 4 ) 6 (OH) 2 ) as a phosphate (Pi) fertilizer was evaluated as well as its impact on soil and…”
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Global Analysis of the Fungal Microbiome in Cystic Fibrosis Patients Reveals Loss of Function of the Transcriptional Repressor Nrg1 as a Mechanism of Pathogen Adaptation by Kim, Sang Hu, Clark, Shawn T, Surendra, Anuradha, Copeland, Julia K, Wang, Pauline W, Ammar, Ron, Collins, Cathy, Tullis, D Elizabeth, Nislow, Corey, Hwang, David M, Guttman, David S, Cowen, Leah E

“…The microbiome shapes diverse facets of human biology and disease, with the importance of fungi only beginning to be appreciated. Microbial communities…”
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Examining the relationship between maternal body size, gestational glucose tolerance status, mode of delivery and ethnicity on human milk microbiota at three months post-partum by LeMay-Nedjelski, Lauren, Butcher, James, Ley, Sylvia H, Asbury, Michelle R, Hanley, Anthony J, Kiss, Alex, Unger, Sharon, Copeland, Julia K, Wang, Pauline W, Zinman, Bernard, Stintzi, Alain, O'Connor, Deborah L

“…Few studies have examined how maternal body mass index (BMI), mode of delivery and ethnicity affect the microbial composition of human milk and none have…”
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Mycobiome Sequencing and Analysis Applied to Fungal Community Profiling of the Lower Respiratory Tract During Fungal Pathogenesis by McTaggart, Lisa R, Copeland, Julia K, Surendra, Anuradha, Wang, Pauline W, Husain, Shahid, Coburn, Bryan, Guttman, David S, Kus, Julianne V

“…Invasive fungal infections are an increasingly important cause of human morbidity and mortality. We generated a next-generation sequencing (NGS)-based method…”
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Systematic profiling of the chicken gut microbiome reveals dietary supplementation with antibiotics alters expression of multiple microbial pathways with minimal impact on community structure by Zou, Angela, Nadeau, Kerry, Xiong, Xuejian, Wang, Pauline W., Copeland, Julia K., Lee, Jee Yeon, Pierre, James St, Ty, Maxine, Taj, Billy, Brumell, John H., Guttman, David S., Sharif, Shayan, Korver, Doug, Parkinson, John

“…Abstract Background The emergence of antimicrobial resistance is a major threat to global health and has placed pressure on the livestock industry to eliminate…”
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Invariant natural killer T cells minimally influence gut microbiota composition in mice by Lin, Qiaochu, Kuypers, Meggie, Liu, Zhewei, Copeland, Julia K, Chan, Donny, Robertson, Susan J, Kontogiannis, Jean, Guttman, David S, Banks, E. Kate, Philpott, Dana J, Mallevaey, Thierry

“…Invariant Natural Killer T (iNKT) cells are unconventional T cells that respond to glycolipid antigens found in microbes in a CD1d-dependent manner. iNKT cells…”
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The Impact of Migration on the Gut Metagenome of South Asian Canadians by Copeland, Julia K., Chao, Gary, Vanderhout, Shelley, Acton, Erica, Wang, Pauline W., Benchimol, Eric I., El-Sohemy, Ahmed, Croitoru, Ken, Gommerman, Jennifer L., Guttman, David S.

“…South Asian (SA) Canadian immigrants have a higher risk of developing certain immune-mediated inflammatory diseases compared to non-migrant SAs. We sought to…”
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Assessment of Inter-Laboratory Variation in the Characterization and Analysis of the Mucosal Microbiota in Crohn's Disease and Ulcerative Colitis by Szamosi, Jake C, Forbes, Jessica D, Copeland, Julia K, Knox, Natalie C, Shekarriz, Shahrokh, Rossi, Laura, Graham, Morag, Bonner, Christine, Guttman, David S, Van Domselaar, Gary, Surette, Michael G, Bernstein, Charles N

“…In studies evaluating the microbiome, numerous factors can contribute to technical variability. These factors include DNA extraction methodology, sequencing…”
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Mother’s milk microbiota is associated with the developing gut microbial consortia in very-low-birth-weight infants by Shama, Sara, Asbury, Michelle R., Kiss, Alex, Bando, Nicole, Butcher, James, Comelli, Elena M., Copeland, Julia K., Greco, Adrianna, Kothari, Akash, Sherman, Philip M., Stintzi, Alain, Taibi, Amel, Tomlinson, Christopher, Unger, Sharon, Wang, Pauline W., O’Connor, Deborah L.

“…Mother’s milk contains diverse bacterial communities, although their impact on microbial colonization in very-low-birth-weight (VLBW, <1,500 g) infants remains…”
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Maternal Diet and Infant Feeding Practices Are Associated with Variation in the Human Milk Microbiota at 3 Months Postpartum in a Cohort of Women with High Rates of Gestational Glucose Intolerance by LeMay-Nedjelski, Lauren, Asbury, Michelle R, Butcher, James, Ley, Sylvia H, Hanley, Anthony J, Kiss, Alex, Unger, Sharon, Copeland, Julia K, Wang, Pauline W, Stintzi, Alain, O'Connor, Deborah L

“…Human milk contains a diverse community of bacteria believed to play a role in breast health and inoculation of the infant's gastrointestinal tract. The role…”
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Mothers of Preterm Infants Have Individualized Breast Milk Microbiota that Changes Temporally Based on Maternal Characteristics by Asbury, Michelle R., Butcher, James, Copeland, Julia K., Unger, Sharon, Bando, Nicole, Comelli, Elena M., Forte, Victoria, Kiss, Alex, LeMay-Nedjelski, Lauren, Sherman, Philip M., Stintzi, Alain, Tomlinson, Christopher, Wang, Pauline W., O’Connor, Deborah L.

“…Mother’s milk contains complex microbial communities thought to be important for colonizing a preterm infant’s gastrointestinal tract. However, little is known…”
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Human milk nutrient fortifiers alter the developing gastrointestinal microbiota of very-low-birth-weight infants by Asbury, Michelle R., Shama, Sara, Sa, Jong Yup, Bando, Nicole, Butcher, James, Comelli, Elena M., Copeland, Julia K., Forte, Victoria, Kiss, Alex, Sherman, Philip M., Stintzi, Alain, Taibi, Amel, Tomlinson, Christopher, Unger, Sharon, Wang, Pauline W., O’Connor, Deborah L.

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Oligosaccharides and Microbiota in Human Milk Are Interrelated at 3 Months Postpartum in a Cohort of Women with a High Prevalence of Gestational Impaired Glucose Tolerance by LeMay-Nedjelski, Lauren, Yonemitsu, Chloe, Asbury, Michelle R, Butcher, James, Ley, Sylvia H, Hanley, Anthony J, Kiss, Alex, Unger, Sharon, Copeland, Julia K, Wang, Pauline W, Stintzi, Alain, Bode, Lars, O'Connor, Deborah L

“…Human milk is a rich source of human milk oligosaccharides (HMOs) and bacteria. It is unclear how these components interact within the breast microenvironment…”
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Characterization and predictive functional profiles on metagenomic 16S rRNA data of liver transplant recipients: A longitudinal study by Sivaraj, Saranya, Copeland, Julia K., Malik, Anshu, Pasini, Elisa, Angeli, Marc, Azhie, Amirhossein, Husain, Shahid, Kumar, Deepali, Allard, Johane, Guttman, David S., Humar, Atul, Bhat, Mamatha

“…Long‐term survival after Liver Transplantation (LT) is often compromised by infectious and metabolic complications. We aimed to delineate alterations in…”
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Gut Microbial Metabolism Drives Transformation of Msh2-Deficient Colon Epithelial Cells by Belcheva, Antoaneta, Irrazabal, Thergiory, Robertson, Susan J., Streutker, Catherine, Maughan, Heather, Rubino, Stephen, Moriyama, Eduardo H., Copeland, Julia K., Surendra, Anu, Kumar, Sachin, Green, Blerta, Geddes, Kaoru, Pezo, Rossanna C., Navarre, William W., Milosevic, Michael, Wilson, Brian C., Girardin, Stephen E., Wolever, Thomas M.S., Edelmann, Winfried, Guttman, David S., Philpott, Dana J., Martin, Alberto

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