Search Results - "Colwell, R R"

Microbial resolution of whole genome shotgun and 16S amplicon metagenomic sequencing using publicly available NEON data by Brumfield, Kyle D, Huq, Anwar, Colwell, Rita R, Olds, James L, Leddy, Menu B

“…Microorganisms are ubiquitous in the biosphere, playing a crucial role in both biogeochemistry of the planet and human health. However, identifying these…”
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Ocean Warming and Spread of Pathogenic Vibrios in the Aquatic Environment by Vezzulli, Luigi, Colwell, Rita R., Pruzzo, Carla

“…Vibrios are among the most common bacteria that inhabit surface waters throughout the world and are responsible for a number of severe infections both in…”
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Metagenomic Next-Generation Sequencing of Nasopharyngeal Specimens Collected from Confirmed and Suspect COVID-19 Patients by Mostafa, Heba H, Fissel, John A, Fanelli, Brian, Bergman, Yehudit, Gniazdowski, Victoria, Dadlani, Manoj, Carroll, Karen C, Colwell, Rita R, Simner, Patricia J

“…Metagenomic next-generation sequencing (mNGS) offers an agnostic approach for emerging pathogen detection directly from clinical specimens. In contrast to…”
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Virioplankton: Viruses in Aquatic Ecosystems by WOMMACK, K. E, COLWELL, R. R

“…Article Usage Stats Services MMBR Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Distribution and dynamics of epidemic and pandemic Vibrio parahaemolyticus virulence factors by Ceccarelli, Daniela, Hasan, Nur A, Huq, Anwar, Colwell, Rita R

“…Vibrio parahaemolyticus, autochthonous to estuarine, marine, and coastal environments throughout the world, is the causative agent of food-borne…”
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Comprehensive benchmarking and ensemble approaches for metagenomic classifiers by McIntyre, Alexa B R, Ounit, Rachid, Afshinnekoo, Ebrahim, Prill, Robert J, Hénaff, Elizabeth, Alexander, Noah, Minot, Samuel S, Danko, David, Foox, Jonathan, Ahsanuddin, Sofia, Tighe, Scott, Hasan, Nur A, Subramanian, Poorani, Moffat, Kelly, Levy, Shawn, Lonardi, Stefano, Greenfield, Nick, Colwell, Rita R, Rosen, Gail L, Mason, Christopher E

“…One of the main challenges in metagenomics is the identification of microorganisms in clinical and environmental samples. While an extensive and heterogeneous…”
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A comparative analysis of drinking water employing metagenomics by Brumfield, Kyle D, Hasan, Nur A, Leddy, Menu B, Cotruvo, Joseph A, Rashed, Shah M, Colwell, Rita R, Huq, Anwar

“…The microbiological content of drinking water traditionally is determined by employing culture-dependent methods that are unable to detect all microorganisms,…”
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Effects of Global Climate on Infectious Disease: the Cholera Model by LIPP, Erin K, ANWAR HUQ, COLWELL, Rita R

“…Classifications Services CMR Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley Reddit…”
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Microbial community profiling of human saliva using shotgun metagenomic sequencing by Hasan, Nur A, Young, Brian A, Minard-Smith, Angela T, Saeed, Kelly, Li, Huai, Heizer, Esley M, McMillan, Nancy J, Isom, Richard, Abdullah, Abdul Shakur, Bornman, Daniel M, Faith, Seth A, Choi, Seon Young, Dickens, Michael L, Cebula, Thomas A, Colwell, Rita R

“…Human saliva is clinically informative of both oral and general health. Since next generation shotgun sequencing (NGS) is now widely used to identify and…”
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Diagnostic Limitations to Accurate Diagnosis of Cholera by Alam, Munirul, Hasan, Nur A, Sultana, Marzia, Nair, G. Balakrish, Sadique, A, Faruque, A.S.G, Endtz, Hubert P, Sack, R.B, Huq, A, Colwell, R.R, Izumiya, Hidemasa, Morita, Masatomo, Watanabe, Haruo, Cravioto, Alejandro

“…The treatment regimen for diarrhea depends greatly on correct diagnosis of its etiology. Recent diarrhea outbreaks in Bangladesh showed Vibrio cholerae to be…”
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Global Climate and Infectious Disease: The Cholera Paradigm by Colwell, Rita R.

“…The origin of cholera has been elusive, even though scientific evidence clearly shows it is a waterborne disease. However, standard bacteriological procedures…”
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Non-O1/non-O139 Vibrio cholerae carrying multiple virulence factors and V. cholerae O1 in the Chesapeake Bay, Maryland by Ceccarelli, Daniela, Chen, Arlene, Hasan, Nur A, Rashed, Shah M, Huq, Anwar, Colwell, Rita R

“…Non-O1/non-O139 Vibrio cholerae inhabits estuarine and coastal waters globally, but its clinical significance has not been sufficiently investigated, despite…”
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A New Scale to Measure Executive Servant Leadership: Development, Analysis, and Implications for Research by Reed, Lora L., Vidaver-Cohen, Deborah, Colwell, Sott R.

“…This article introduces a new scale to measure executive servant leadership, situating the need for this scale within the context of ethical leadership and its…”
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Prokaryotic responses to hydrostatic pressure in the ocean - a review by Tamburini, Christian, Boutrif, Mehdi, Garel, Marc, Colwell, Rita R., Deming, Jody W.

“…Summary Effects of hydrostatic pressure on pure cultures of prokaryotes have been studied extensively but impacts at the community level in the ocean are less…”
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Cross-talk among flesh-eating Aeromonas hydrophila strains in mixed infection leading to necrotizing fasciitis by Ponnusamy, Duraisamy, Kozlova, Elena V., Sha, Jian, Erova, Tatiana E., Azar, Sasha R., Fitts, Eric C., Kirtley, Michelle L., Tiner, Bethany L., Andersson, Jourdan A., Grim, Christopher J., Isom, Richard P., Hasan, Nur A., Colwell, Rita R., Chopra, Ashok K.

“…Necrotizing fasciitis (NF) caused by flesh-eating bacteria is associated with high case fatality. In an earlier study, we reported infection of an…”
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Microbiome Analysis for Wastewater Surveillance during COVID-19 by Brumfield, Kyle D, Leddy, Menu, Usmani, Moiz, Cotruvo, Joseph A, Tien, Ching-Tzone, Dorsey, Suzanne, Graubics, Karlis, Fanelli, Brian, Zhou, Isaac, Registe, Nathaniel, Dadlani, Manoj, Wimalarante, Malinda, Jinasena, Dilini, Abayagunawardena, Rushan, Withanachchi, Chiran, Huq, Anwar, Jutla, Antarpreet, Colwell, Rita R

“…Wastewater surveillance (WS), when coupled with advanced molecular techniques, offers near real-time monitoring of community-wide transmission of SARS-CoV-2…”
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Long-term effects of ocean warming on the prokaryotic community: evidence from the vibrios by Vezzulli, Luigi, Brettar, Ingrid, Pezzati, Elisabetta, Reid, Philip C, Colwell, Rita R, Höfle, Manfred G, Pruzzo, Carla

“…The long-term effects of ocean warming on prokaryotic communities are unknown because of lack of historical data. We overcame this gap by applying a…”
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Genomic attributes of Vibrio cholerae O1 responsible for 2022 massive cholera outbreak in Bangladesh by Monir, Md Mamun, Islam, Mohammad Tarequl, Mazumder, Razib, Mondal, Dinesh, Nahar, Kazi Sumaita, Sultana, Marzia, Morita, Masatomo, Ohnishi, Makoto, Huq, Anwar, Watanabe, Haruo, Qadri, Firdausi, Rahman, Mustafizur, Thomson, Nicholas, Seed, Kimberley, Colwell, Rita R., Ahmed, Tahmeed, Alam, Munirul

“…In 2022, one of its worst cholera outbreaks began in Bangladesh and the icddr,b Dhaka hospital treated more than 1300 patients and ca. 42,000 diarrheal cases…”
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Emerging Marine Diseases -- Climate Links and Anthropogenic Factors by Harvell, C. D., Kim, K., Burkholder, J. M., Colwell, R. R., Epstein, P. R., Grimes, D. J., Hofmann, E. E., Lipp, E. K., A. D. M. E. Osterhaus, Overstreet, R. M., Porter, J. W., Smith, G. W., Vasta, G. R.

“…Mass mortalities due to disease outbreaks have recently affected major taxa in the oceans. For closely monitored groups like corals and marine mammals, reports…”
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The microbiomes of blowflies and houseflies as bacterial transmission reservoirs by Junqueira, Ana Carolina M., Ratan, Aakrosh, Acerbi, Enzo, Drautz-Moses, Daniela I., Premkrishnan, Balakrishnan N. V., Costea, Paul I., Linz, Bodo, Purbojati, Rikky W., Paulo, Daniel F., Gaultier, Nicolas E., Subramanian, Poorani, Hasan, Nur A., Colwell, Rita R., Bork, Peer, Azeredo-Espin, Ana Maria L., Bryant, Donald A., Schuster, Stephan C.

“…Blowflies and houseflies are mechanical vectors inhabiting synanthropic environments around the world. They feed and breed in fecal and decaying organic…”
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