Search Results - "Cogan, Noel O.I."

Genotyping‐by‐sequencing through transcriptomics: implementation in a range of crop species with varying reproductive habits and ploidy levels by Malmberg, M. Michelle, Pembleton, Luke W., Baillie, Rebecca C., Drayton, Michelle C., Sudheesh, Shimna, Kaur, Sukhjiwan, Shinozuka, Hiroshi, Verma, Preeti, Spangenberg, German C., Daetwyler, Hans D., Forster, John W., Cogan, Noel O.I.

“…Summary The application of genomics in crops has the ability to significantly improve genetic gain for agriculture. Many marker‐dense tools have been…”
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Genomic Prediction Using Prior Quantitative Trait Loci Information Reveals a Large Reservoir of Underutilised Blackleg Resistance in Diverse Canola (Brassica napus L.) Lines by Fikere, Mulusew, Barbulescu, Denise M., Malmberg, Michelle M., Shi, Fan, Koh, Joshua C.O., Slater, Anthony T., MacLeod, Iona M., Bowman, Phillip J., Salisbury, Phillip A., Spangenberg, German C., Cogan, Noel O.I., Daetwyler, Hans D.

“…Core Ideas Genomic prediction accuracy was moderate to high for blackleg resistance within and low across locations indicating substantial…”
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Safety Assessment of Genetically Modified Feed: Is There Any Difference From Food? by Giraldo, Paula A, Shinozuka, Hiroshi, Spangenberg, German C, Cogan, Noel O I, Smith, Kevin F

“…Food security is one of major concerns for the growing global population. Modern agricultural biotechnologies, such as genetic modification, are a possible…”
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Exploitation of data from breeding programs supports rapid implementation of genomic selection for key agronomic traits in perennial ryegrass by Pembleton, Luke W., Inch, Courtney, Baillie, Rebecca C., Drayton, Michelle C., Thakur, Preeti, Ogaji, Yvonne O., Spangenberg, German C., Forster, John W., Daetwyler, Hans D., Cogan, Noel O. I.

“…Key message Exploitation of data from a ryegrass breeding program has enabled rapid development and implementation of genomic selection for sward-based biomass…”
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Improving the analysis of low heritability complex traits for enhanced genetic gain in potato by Slater, Anthony T, Wilson, Graeme M, Cogan, Noel O. I, Forster, John W, Hayes, Benjamin J

“…KEY MESSAGE : Best linear unbiased prediction (BLUP), which uses pedigree to estimate breeding values, can result in increased genetic gains for low…”
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Improving Genetic Gain with Genomic Selection in Autotetraploid Potato by Slater, Anthony T., Cogan, Noel O.I., Forster, John W., Hayes, Benjamin J., Daetwyler, Hans D.

“…Core Ideas Progress in conventional potato breeding can be complex and slow. Genomic selection can be applied to autotetraploid potato. A number of factors…”
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EST-SNP discovery and dense genetic mapping in lentil (Lens culinaris Medik.) enable candidate gene selection for boron tolerance by Kaur, Sukhjiwan, Cogan, Noel O. I, Stephens, Amber, Noy, Dianne, Butsch, Mirella, Forster, John W, Materne, Michael

“…KEY MESSAGE : Large-scale SNP discovery and dense genetic mapping in a lentil intraspecific cross permitted identification of a single chromosomal region…”
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Reference transcriptome assembly and annotation for perennial ryegrass by Shinozuka, Hiroshi, Cogan, Noel O I, Spangenberg, German C, Forster, John W

“…RNA-Seq methodology has been used to generate a comprehensive transcriptome sequence resource for perennial ryegrass, an important temperate pasture grass…”
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Improving breeding efficiency in potato using molecular and quantitative genetics by Slater, Anthony T, Cogan, Noel O. I, Hayes, Benjamin J, Schultz, Lee, Dale, M. Finlay B, Bryan, Glenn J, Forster, John W

“…KEY MESSAGE : Potatoes are highly heterozygous and the conventional breeding of superior germplasm is challenging, but use of a combination of MAS and EBVs can…”
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Validation of molecular markers associated with boron tolerance, powdery mildew resistance and salinity tolerance in field peas by Javid, Muhammad, Rosewarne, Garry M, Sudheesh, Shimna, Kant, Pragya, Leonforte, Antonio, Lombardi, Maria, Kennedy, Peter R, Cogan, Noel O I, Slater, Anthony T, Kaur, Sukhjiwan

“…Field pea (Pisum sativum L.) is an important grain legume consumed both as human food and animal feed. However, productivity in low rainfall regions can be…”
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Identification of genetic factors influencing salt stress tolerance in white clover (Trifolium repens L.) by QTL analysis by Wang, Junping, Drayton, Michelle C, George, Julie, Cogan, Noel O. I, Baillie, Rebecca C, Hand, Melanie L, Kearney, Gavin A, Erb, Stacey, Wilkinson, Tania, Bannan, Nathaniel R, Forster, John W, Smith, Kevin F

“…Allotetraploid (2n = 4x = 32) white clover (Trifolium repens L.) is the most commonly cultivated legume component of temperate pastures, sown in swards with a…”
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Identification of QTLs for morphological traits influencing waterlogging tolerance in perennial ryegrass (Lolium perenne L.) by Pearson, Allison, Cogan, Noel O. I, Baillie, Rebecca C, Hand, Melanie L, Bandaranayake, Champa K, Erb, Stacey, Wang, Junping, Kearney, Gavin A, Gendall, Anthony R, Smith, Kevin F, Forster, John W

“…Perennial ryegrass is a globally cultivated obligate outbreeding diploid species (2n = 2x = 14) which is subjected to periods of waterlogging stress due to…”
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Assignment of Individual Genotypes to Specific Forage Cultivars of Perennial Ryegrass Based on SSR Markers by Wang, Junping, Dobrowolski, Mark P, Cogan, Noel O.I, Forster, John W, Smith, Kevin F

“…Assignment or exclusion of an individual to specific populations or cultivars based on molecular genetic markers provides an attractive approach for varietal…”
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Assessment of genetic diversity in cultivars of white clover (Trifolium repens L.) detected by SSR polymorphisms by George, Julie, Dobrowolski, Mark P, van Zijll de Jong, Eline, Cogan, Noel O I, Smith, Kevin F, Forster, John W

“…White clover (Trifolium repens L.) is an important temperate pasture legume that plays a key role as a companion to grass species, such as perennial ryegrass…”
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Comparison of genome structure between white clover and Medicago truncatula supports homoeologous group nomenclature based on conserved synteny by George, Julie, Sawbridge, Timothy I, Cogan, Noel O I, Gendall, Anthony R, Smith, Kevin F, Spangenberg, German C, Forster, John W

“…Computational analysis has been used to align the genetic map of white clover (Trifolium repens L.) with the draft genome sequence of the model legume species…”
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Development and characterization of EST-SSR markers for the crown rust pathogen of ryegrass (Puccinia coronata f.sp. lolii) by Dracatos, Peter M, Dumsday, Jeremy L, Olle, Rhiannon S, Cogan, Noel O I, Dobrowolski, Mark P, Fujimori, Masahiro, Roderick, Hywel, Stewart, Alan V, Smith, Kevin F, Forster, John W

“…The causative organism of crown rust in ryegrasses (Puccinia coronata f.sp. lolii) is an obligate biotroph that causes significant economic losses within the…”
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StAMPP: an R package for calculation of genetic differentiation and structure of mixed-ploidy level populations by Pembleton, Luke W., Cogan, Noel O. I., Forster, John W.

“…Statistical Analysis of Mixed‐Ploidy Populations (StAMPP) is a freely available R package for calculation of population structure and differentiation based on…”
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Prospects and challenges of implementing DNA metabarcoding for high-throughput insect surveillance by Piper, Alexander M, Batovska, Jana, Cogan, Noel O I, Weiss, John, Cunningham, John Paul, Rodoni, Brendan C, Blacket, Mark J

“…Trap-based surveillance strategies are widely used for monitoring of invasive insect species, aiming to detect newly arrived exotic taxa as well as track the…”
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Generation of a Comprehensive Transcriptome Atlas and Transcriptome Dynamics in Medicinal Cannabis by Braich, Shivraj, Baillie, Rebecca C., Jewell, Larry S., Spangenberg, German C., Cogan, Noel O. I.

“…Cannabinoids are the main medicinal compounds of interest in the plant Cannabis sativa , that are primarily synthesised in the glandular trichomes; found on…”
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Developing Prediction Models Using Near-Infrared Spectroscopy to Quantify Cannabinoid Content in Cannabis Sativa by Tran, Jonathan, Vassiliadis, Simone, Elkins, Aaron C, Cogan, Noel O I, Rochfort, Simone J

“…Cannabis is commercially cultivated for both therapeutic and recreational purposes in a growing number of jurisdictions. The main cannabinoids of interest are…”
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