Search Results - "Coble, Michael D"

Probabilistic genotyping software: An overview by Coble, Michael D., Bright, Jo-Anne

“…•A historical background of mixture interpretation is presented.•Probabilistic methods of interpretation are described.•Future needs of probabilistic methods…”
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The phylogeny of the four pan-American MtDNA haplogroups: implications for evolutionary and disease studies by Achilli, Alessandro, Perego, Ugo A, Bravi, Claudio M, Coble, Michael D, Kong, Qing-Peng, Woodward, Scott R, Salas, Antonio, Torroni, Antonio, Bandelt, Hans-Jürgen

“…Only a limited number of complete mitochondrial genome sequences belonging to Native American haplogroups were available until recently, which left America as…”
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U.S. population data for 29 autosomal STR loci by Hill, Carolyn R, Duewer, David L, Kline, Margaret C, Coble, Michael D, Butler, John M

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Exploring the advantages of amplifying the entire extract versus splitting the extract and interpreting replicates using a continuous model of interpretation by Bille, Todd, Coble, Michael D., Bright, Jo-Anne

“…Previous studies examining whether splitting the DNA extract for replicate amplification versus maximizing the template available for a 'one-shot'…”
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Demographic History of Indigenous Populations in Mesoamerica Based on mtDNA Sequence Data by González-Martín, Antonio, Gorostiza, Amaya, Regalado-Liu, Lucía, Arroyo-Peña, Sergio, Tirado, Sergio, Nuño-Arana, Ismael, Rubi-Castellanos, Rodrigo, Sandoval, Karla, Coble, Michael D, Rangel-Villalobos, Héctor

“…The genetic characterization of Native American groups provides insights into their history and demographic events. We sequenced the mitochondrial D-loop…”
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Mystery solved: the identification of the two missing Romanov children using DNA analysis by Coble, Michael D, Loreille, Odile M, Wadhams, Mark J, Edson, Suni M, Maynard, Kerry, Meyer, Carna E, Niederstätter, Harald, Berger, Cordula, Berger, Burkhard, Falsetti, Anthony B, Gill, Peter, Parson, Walther, Finelli, Louis N

“…One of the greatest mysteries for most of the twentieth century was the fate of the Romanov family, the last Russian monarchy. Following the abdication of Tsar…”
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A new implementation of a semi-continuous method for DNA mixture interpretation by Alfieri, Jacob, Coble, Michael D., Conroy, Carole, Dahl, Angela, Hares, Douglas R., Weir, Bruce S., Wolock, Charles, Zhao, Edward, Kingston, Hanley, Zolandz, Timothy W.

“…A new calculation module within the PopStats module of the CODIS software package, based on the underlying mathematics presented in the MixKin software…”
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An optimized protocol for forensic application of the PreCR™ Repair Mix to multiplex STR amplification of UV-damaged DNA by Diegoli, Toni M, Farr, Matthew, Cromartie, Carter, Coble, Michael D, Bille, Todd W

“…Abstract Damage to the DNA molecule can occur through exposure to environmental conditions such as ultraviolet light, heat and humidity. Forensic samples are…”
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Development and characterization of two mini-X chromosomal short tandem repeat multiplexes by Diegoli, Toni M, Coble, Michael D

“…Abstract This study presents the development and characterization of two X chromosomal short tandem repeat (STR) multiplexes utilizing reduced-size amplicons…”
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Evaluation of forensic DNA mixture evidence: protocol for evaluation, interpretation, and statistical calculations using the combined probability of inclusion by Bieber, Frederick R, Buckleton, John S, Budowle, Bruce, Butler, John M, Coble, Michael D

“…The evaluation and interpretation of forensic DNA mixture evidence faces greater interpretational challenges due to increasingly complex mixture evidence. Such…”
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Commentary on: Thompson WC. Uncertainty in probabilistic genotyping of low template DNA: a case study comparing STRmix™ and TrueAllele™. J Forensic Sci. 2023;68 (3):1049–63. doi: 10.1111/1556‐4029.15225 by Kalafut, Tim, Curran, James M., Coble, Michael D., Buckleton, John

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Expected net gain data of low-template DNA analyses by Gittelson, Simone, Steffen, Carolyn R., Coble, Michael D.

“…Low-template DNA analyses are affected by stochastic effects which can produce a configuration of peaks in the electropherogram (EPG) that is different from…”
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NIST interlaboratory studies involving DNA mixtures (MIX05 and MIX13): Variation observed and lessons learned by Butler, John M., Kline, Margaret C., Coble, Michael D.

“…•Results are described for two interlaboratory studies, NIST MIX05 and MIX13.•With MIX05, 69 laboratories interpreted two-person DNA mixtures from four mock…”
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Assessment of human nuclear and mitochondrial DNA qPCR assays for quantification accuracy utilizing NIST SRM 2372a by Cropper, Emily, Coble, Michael D., Kavlick, Mark F.

“…In forensic DNA casework, a highly accurate real-time quantitative polymerase chain reaction (qPCR) assay is recommended per the Scientific Working Group on…”
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The peopling of South America and the trans-Andean gene flow of the first settlers by Gomez-Carballa, Alberto, Pardo-Seco, Jacobo, Brandini, Stefania, Achilli, Alessandro, Perego, Ugo A, Coble, Michael D, Diegoli, Toni M, Alvarez-Iglesias, Vanesa, Martinon-Torres, Federico, Olivieri, Anna, Torroni, Antonio, Salas, Antonio

“…Genetic and archaeological data indicate that the initial Paleoindian settlers of South America followed two entry routes separated by the Andes and the Amazon…”
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Study of CTS DNA Proficiency Tests with Regard to DNA Mixture Interpretation: A NIST Scientific Foundation Review by Bille, Todd, Coble, Michael D, Kalafut, Tim, Buckleton, John

“…The National Institute of Standards and Technology has released a document entitled DNA Mixture Interpretation: A NIST Scientific Foundation Review for public…”
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Mixture detection with Demixtify by Woerner, August E, Crysup, Benjamin, King, Jonathan L, Novroski, Nicole M, Coble, Michael D

“…The de facto genetic markers of forensics are short tandem repeats (STRs). There are many analytical tools designed to work with STRs, including techniques for…”
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Identifying distant relatives using benchtop-scale sequencing by Woerner, August E, Novroski, Nicole M, Mandape, Sammed, King, Jonathan L, Crysup, Benjamin, Coble, Michael D

“…The genetic component of forensic genetic genealogy (FGG) is an estimate of kinship, often conducted at genome scales between a great number of individuals…”
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Low-template DNA: a single DNA analysis or two replicates? by Gittelson, Simone, Steffen, Carolyn R, Coble, Michael D

“…Highlights • Two replicates have a greater expected net gain than a single DNA analysis • The threshold average peak height that makes two replicates more…”
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Toward Male Individualization with Rapidly Mutating Y-Chromosomal Short Tandem Repeats by Ballantyne, Kaye N., Ralf, Arwin, Aboukhalid, Rachid, Achakzai, Niaz M., Anjos, Maria J., Ayub, Qasim, Balažic, Jože, Ballantyne, Jack, Berger, Burkhard, Bobillo, Cecilia, Burri, Helen, Capal, Tomas, Caratti, Stefano, Cárdenas, Jorge, Carvalho, Monica, Comas, David, Corach, Daniel, D'Amato, Maria E., Davison, Sean, de Knijff, Peter, De Ungria, Maria Corazon A., Decorte, Ronny, Dobosz, Tadeusz, Dupuy, Berit M., Grol, Laurens, Haas, Cordula, Hanson, Erin, Henke, Jürgen, Henke, Lotte, Herrera-Rodríguez, Fabiola, Hill, Carolyn R., Holmlund, Gunilla, Honda, Katsuya, Inokuchi, Shota, Jobling, Mark A., Kaddura, Mahmoud, Kim, Jong S., Kim, Soon H., Kim, Wook, King, Turi E., Kling, Daniel, Kovačević, Lejla, Kovatsi, Leda, Krajewski, Paweł, Kravchenko, Sergey, Larmuseau, Maarten H. D., Lee, Eun Young, Lessig, Ruediger, Livshits, Ludmila A., Marjanović, Damir, Minarik, Marek, Mukherjee, Meeta, Munier, Patrick, Nagaraju, Javaregowda, Neuhuber, Franz, Nie, Shengjie, Nilasitsataporn, Premlaphat, Nishi, Takeki, Oh, Hye H., Palo, Jukka U., Pamjav, Horolma, Parson, Walther, Petlach, Michal, Phillips, Christopher, Ploski, Rafal, Primorac, Dragan, Purnomo, Gludhug A., Purps, Josephine, Rębała, Krzysztof, Rerkamnuaychoke, Budsaba, Robino, Carlo, Roewer, Lutz, Rosa, Alexandra, Sajantila, Antti, Sala, Andrea, Sanz, Paula, Schmitt, Cornelia, Sharma, Anil K., Shin, Kyoung-Jin, Sirker, Miriam, Siváková, Daniela, Solano-Matamoros, Carlos, Souto, Luis, Stenzl, Vlastimil, Sudoyo, Herawati, Syndercombe-Court, Denise, Tagliabracci, Adriano, Taylor, Duncan, Tillmar, Andreas, Tsybovsky, Iosif S., Tyler-Smith, Chris, van der Gaag, Kristiaan J., Vanek, Daniel, Völgyi, Antónia, Ward, Denise, Willemse, Patricia, Yap, Eric P.H., Yong, Rita Y.Y., Pajnič, Irena Zupanič, Kayser, Manfred

“…ABSTRACT Relevant for various areas of human genetics, Y‐chromosomal short tandem repeats (Y‐STRs) are commonly used for testing close paternal relationships…”
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