Search Results - "Coard, Thomas"

Abstract 1096: Harmonization standards from the Variant Interpretation for Cancer Consortium by Wagner, Alex H., Hart, Reece K., Babb, Larry, Freimuth, Robert R., Coffman, Adam, Liang, Yonghao, Pitel, Beth, Roy, Angshumoy, Brush, Matthew, Lee, Jennifer, Lu, Anna, Coard, Thomas, Rao, Shruti, Ritter, Deborah, Walsh, Brian, Mockus, Susan, Horak, Peter, King, Ian, Sonkin, Dmitriy, Madhavan, Subha, Raca, Gordana, Chakravarty, Debyani, Griffith, Malachi, Griffith, Obi L.

“…The use of clinical gene sequencing is now commonplace, and genome analysts and molecular pathologists are often tasked with the labor-intensive process of…”
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Abstract 449: A standard operating procedure for the curation of gene fusions by Wagner, Alex H., Vlachos, Ioannis S., Sonkin, Dmitriy, Terraf, Panieh, Kesserwan, Chimene, Sboner, Andrea, Coard, Thomas, Reich, Christian, Ritter, Deborah I., Horak, Peter, Zou, Ying S., Tanska, Anna, Berlin, Aaron M., Lu, Anna, Cameron, Daniel, Williams, Heather E., Lin, Wan-Hsin, Toruner, Gokce, Danos, Arpad, Saliba, Jason, Xu, Huiling, Xu, Xinjie, Ryland, Georgina, Ceccarelli, Michele, Zhang, Liying, Rapisardo, Sarah, Rehder, Catherine, Liu, Xuelu, Pallavajjala, Aparna, Park, Nicole, Satgunaseelan, Laveniya, Lee, Kristy, Liu, Jie, Griffith, Obi, Freimuth, Robert R., Stenzinger, Albrecht, Baughn, Linda B., Baudis, Michael, Lee, Jennifer, Li, Marilyn, Roy, Angshumoy, Raca, Gordana

“…Despite the well-established role of recurrent gene fusions as oncogenic drivers, current practices for characterizing and interpreting gene fusion events in…”
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59. Integrating cytogenomic and sequence variants in the GA4GH variation representation specification by Wagner, Alex, Babb, Lawrence, Freimuth, Robert, Pitel, Beth, Krysiak, Kilannin, Roy, Angshumoy, Coard, Thomas, Lu, Anna, King, Ian, Sonkin, Dmitriy, Lee, Jennifer, Raca, Gordana, Griffith, Malachi, Griffith, Obi, Hart, Reece

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17. Multi-consortia initiative to standardize the representation and curation of oncogenic fusions by Wagner, Alex, Vlachos, Ioannis, Sonkin, Dmitriy, Terraf, Panieh, Kesserwan, Chimene, Sboner, Andrea, Coard, Thomas, Reich, Christian, Ritter, Deborah, Horak, Peter, Zou, Ying, Tanska, Anna, Berlin, Aaron, Lu, Anna, Cameron, Daniel, Williams, Heather, Lin, Wan-Hsin, Toruner, Gokce, Danos, Arpad, Saliba, Jason, Xu, Huiling, Xu, Xinjie, Ryland, Georgie, Ceccarelli, Michele, Zhang, Liying, Rapisardo, Sarah, Rehder, Catherine, Liu, Xuelu, Pallavajjala, Aparna, Park, Nicole, Satgunaseelan, Laveniya, Lee, Kristy, Liu, Jie, Griffith, Obi, Freimuth, Robert, Stenzinger, Albrecht, Baughn, Linda, Baudis, Michael, Lee, Jennifer, Li, Marilyn, Roy, Angshumoy, Raca, Gordana

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Incremental and Semi-Supervised Learning of 16S-rRNA Genes For Taxonomic Classification by Ozdogan, Emrecan, Sabin, Norman C., Gracie, Thomas, Portley, Steven, Halac, Mali, Coard, Thomas, Trimble, William, Sokhansanj, Bahrad, Rosen, Gail, Polikar, Robi

“…Genome sequencing generates large volumes of data and hence requires increasingly higher computational resources. The growing data problem is even more acute…”
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Incremental & Semi-Supervised Learning for Functional Analysis of Protein Sequences by Halac, Mali, Sokhansanj, Bahrad, Trimble, William L., Coard, Thomas, Sabin, Norman C., Ozdogan, Emrecan, Polikar, Robi, Rosen, Gail L.

“…Current approaches for the functional annotation of proteins rely on training a classifier based on a fixed reference database. As more genes are sequenced,…”
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