Search Results - "Cloherty, A."

Brief Report: Complete Genome Sequence of CG-0018a-01 Establishes HIV-1 Subtype L by Yamaguchi, Julie, Vallari, Ana, McArthur, Carole, Sthreshley, Larry, Cloherty, Gavin A., Berg, Michael G., Rodgers, Mary A.

“…BACKGROUND:The full spectrum of HIV-1 diversity can be found in Central Africa, including 2 divergent HIV-1 strains collected in 1983 and 1990 in Democratic…”
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Hepatitis B Virus Serum DNA andRNA Levels in Nucleos(t)ide Analog‐Treated or Untreated Patients During Chronic and Acute Infection by Butler, Emily K., Gersch, Jeffrey, McNamara, Anne, Luk, Ka‐Cheung, Holzmayer, Vera, de Medina, Maria, Schiff, Eugene, Kuhns, Mary, Cloherty, Gavin A.

“…Treatment of chronic hepatitis B (CHB) patients with nucleos(t)ide analogs (NAs) suppresses hepatitis B virus (HBV) DNA synthesis but does not affect synthesis…”
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Identification of a putative novel genotype 3/rabbit hepatitis E virus (HEV) recombinant by Luk, Ka-Cheung, Coller, Kelly E, Dawson, George J, Cloherty, Gavin A

“…Hepatitis E virus (HEV) is a viral pathogen transmitted by the fecal-oral route and is a major cause of waterborne acute hepatitis in many developing…”
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Co-Circulation of 2 Oropouche Virus Lineages, Amazon Basin, Colombia, 2024 by Usuga, Jaime, Limonta, Daniel, Perez-Restrepo, Laura S, Ciuoderis, Karl A, Moreno, Isabel, Arevalo, Angela, Vargas, Vanessa, Berg, Michael G, Cloherty, Gavin A, Hernandez-Ortiz, Juan P, Osorio, Jorge E

“…In early 2024, explosive outbreaks of Oropouche virus (OROV) linked to a novel lineage were documented in the Amazon Region of Brazil. We report the…”
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Dengue Virus Serotype 3 Origins and Genetic Dynamics, Jamaica by Redman, Shanice A, Perez, Lester J, Forberg, Kenn, Francis, Keisha, Walker, Jerome P, Thompson, Tamara K, Phillips, Heather, Cloherty, Gavin A, Berg, Michael G, Anzinger, Joshua J

“…We identified 3 clades of dengue virus serotype 3 belonging to genotype III isolated during 2019-2020 in Jamaica by using whole-genome sequencing and…”
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Tergitol-15-S-9 inactivates SARS-CoV-2 and boosts immunoassay signals by Berg, Michael G, Israeli, Eitan, Quaco, Erin, Cloherty, Gavin A, Hemken, Philip M

“…Inactivation of SARS-CoV-2 virus is necessary to mitigate risk but may interfere with diagnostic assay performance. We examined the effect of heat inactivation…”
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Hepatitis B seroconversion revisited: new insights into the natural history of acute hepatitis B virus (HBV) infection from quantitative and highly sensitive assays and novel biomarkers by Kuhns, Mary C, Holzmayer, Vera, McNamara, Anne L, Anderson, Mark, Cloherty, Gavin A

“…Hepatitis B virus (HBV) serum markers during typical acute self-limited infection are usually depicted as a composite of traditional HBV markers. The current…”
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Detection of SARS-CoV-2 variants by Abbott molecular, antigen, and serological tests by Rodgers, Mary A, Olivo, Ana, Harris, Barbara J, Lark, Chris, Luo, Xinxin, Berg, Michael G, Meyer, Todd V, Mohaimani, Aurash, Orf, Gregory S, Goldstein, Yitz, Fox, Amy S, Hirschhorn, Julie, Glen, William B, Nolte, Frederick, Landay, Alan, Jennings, Cheryl, Moy, James, Servellita, Venice, Chiu, Charles, Batra, Rahul, Snell, Luke B, Nebbia, Gaia, Douthwaite, Sam, Tanuri, Amilcar, Singh, Lavanya, de Oliveira, Tulio, Ahouidi, Ambroise, Mboup, Souleymane, Cloherty, Gavin A

“…•Abbott SARS-CoV-2 molecular and antigen assays detect circulating variants.•Variants were detected in virus cultures and sequenced remnant clinical…”
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Parallel evolution of picobirnaviruses from distinct ancestral origins by Perez, Lester J, Cloherty, Gavin A, Berg, Michael G

“…Picobirnaviruses (PBVs) are highly heterogeneous viruses encoding a capsid and RdRp. Detected in a wide variety of animals with and without disease, their…”
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Immune-Escape Mutations Are Prevalent among Patients with a Coexistence of HBsAg and Anti-HBs in a Tertiary Liver Center in the United States by Ali, Mukarram Jamat, Shah, Pir Ahmed, Rehman, Khalil Ur, Kaur, Satinder, Holzmayer, Vera, Cloherty, Gavin A, Kuhns, Mary C, Lau, Daryl T Y

“…The concurrent seropositivity of HBsAg and anti-HBs has been described among patients with chronic hepatitis B (CHB), but its prevalence is variable. HBV…”
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Temporal and coevolutionary analyses reveal the events driving the emergence and circulation of human mamastroviruses by Perez, Lester J., Forberg, Kenn, Cloherty, Gavin A., Berg, Michael G.

“…Characterized by high genetic diversity, broad host range, and resistance to adverse conditions, coupled with recent reports of neurotropic astroviruses…”
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Mayaro Virus as the cause of Acute Febrile Illness in the Colombian Amazon Basin by Perez-Restrepo, Laura S, Ciuoderis, Karl, Usuga, Jaime, Moreno, Isabel, Vargas, Vanessa, Arévalo-Arbelaez, Angela J, Berg, Michael G, Cloherty, Gavin A, Hernández-Ortiz, Juan Pablo, Osorio, Jorge E

“…Mayaro Fever (MF) is a tropical disease caused by the Mayaro virus (MAYV), with outbreaks documented in Latin America. A hospital-based fever surveillance in…”
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Molecular and Serological Characterization of Hepatitis B Virus (HBV)-Positive Samples with Very Low or Undetectable Levels of HBV Surface Antigen by Kuhns, Mary C, Holzmayer, Vera, Anderson, Mark, McNamara, Anne L, Sauleda, Silvia, Mbanya, Dora, Duong, Pham T, Dung, Nguyen T T, Cloherty, Gavin A

“…Gaps remain in the detection of nucleic acid test (NAT) yield and occult hepatitis B virus (HBV) infection (OBI) by current HBV surface antigen (HBsAg) assays…”
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Next-generation sequencing survey of acute febrile illness in Senegal (2020-2022) by Orf, Gregory S, Ahouidi, Ambroise D, Mata, Maximillian, Diedhiou, Cyrille, Mboup, Aminata, Padane, Abdou, Manga, Noel Magloire, Dela-Del Lawson, Agbogbenkou Tevi, Averhoff, Francisco, Berg, Michael G, Cloherty, Gavin A, Mboup, Souleymane

“…Acute febrile illnesses (AFI) in developing tropical and sub-tropical nations are challenging to diagnose due to the numerous causes and non-specific symptoms…”
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Understanding the Genetic Diversity of Picobirnavirus: A Classification Update Based on Phylogenetic and Pairwise Sequence Comparison Approaches by Perez, Lester J, Cloherty, Gavin A, Berg, Michael G

“…Picobirnaviruses (PBVs) are small, double stranded RNA viruses with an ability to infect a myriad of hosts and possessing a high degree of genetic diversity…”
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Advanced molecular surveillance approaches for characterization of blood borne hepatitis viruses by Berg, Michael G, Olivo, Ana, Forberg, Kenn, Harris, Barbara J, Yamaguchi, Julie, Shirazi, Rachel, Gozlan, Yael, Sauleda, Silvia, Kaptue, Lazare, Rodgers, Mary A, Mor, Orna, Cloherty, Gavin A, Khudyakov, Yury E

“…Defining genetic diversity of viral infections directly from patient specimens is the ultimate goal of surveillance. Simple tools that can provide full-length…”
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Methods to evaluate the impact of SARS-CoV-2 nucleocapsid mutations on antigen detection by rapid diagnostic tests by Tieman, Bryan C, Kovacs, Stephen, Rodgers, Mary A, Mohaimani, Aurash, Gregory, Svetoslava, Christensen, David, Moore, Jeffrey A, Schurig-Briccio, Lici, Hartnett, James, Kar, Alak, Leeman, Aaron, Palmer, Angel, Rogers, Lauren, Dragoo, Brian, Muszynski, Steven, Noblesmith, Deborah, Gardner, Samantha, Snipe-Bushey, Abigail, Kill, Anna, Luo, Xinxin, Cherukuri, Sneha, Rae, Tracey, Marohnic, Christopher C, Cloherty, Gavin A, Muerhoff, Anthony Scott, Hemken, Philip M

“…Mutations in the nucleocapsid of SARS-CoV-2 may interfere with antigen detection by diagnostic tests. We used several methods to evaluate the effect of various…”
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Development and performance of prototype serologic and molecular tests for hepatitis delta infection by Coller, Kelly E., Butler, Emily K., Luk, Ka-Cheung, Rodgers, Mary A., Cassidy, Michael, Gersch, Jeffrey, McNamara, Anne L., Kuhns, Mary C., Dawson, George J., Kaptue, Lazare, Bremer, Birgit, Wedemeyer, Heiner, Cloherty, Gavin A.

“…Worldwide, an estimated 5% of hepatitis B virus (HBV) infected people are coinfected with hepatitis delta virus (HDV). HDV infection leads to increased…”
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Metagenomic Detection of Divergent Insect- and Bat-Associated Viruses in Plasma from Two African Individuals Enrolled in Blood-Borne Surveillance by Orf, Gregory S, Olivo, Ana, Harris, Barbara, Weiss, Sonja L, Achari, Asmeeta, Yu, Guixia, Federman, Scot, Mbanya, Dora, James, Linda, Mampunza, Samuel, Chiu, Charles Y, Rodgers, Mary A, Cloherty, Gavin A, Berg, Michael G

“…Metagenomic next-generation sequencing (mNGS) has enabled the high-throughput multiplexed identification of sequences from microbes of potential medical…”
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Emergence of a Distinct Picobirnavirus Genotype Circulating in Patients Hospitalized with Acute Respiratory Illness by Berg, Michael G, Forberg, Kenn, Perez, Lester J, Luk, Ka-Cheung, Meyer, Todd V, Cloherty, Gavin A

“…Picobirnaviruses (PBV) are found in a wide range of hosts and typically associated with gastrointestinal infections in immunocompromised individuals. Here, a…”
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