Search Results - "Clarke, J.B."

Factors influencing early and late outcome following the Fontan procedure in the current era. The ‘Two Commandments’? by Hosein, Riad B.M., Clarke, Andrew J.B., McGuirk, Simon P., Griselli, Massimo, Stumper, Oliver, De Giovanni, Joseph V., Barron, David J., Brawn, William J.

“…Objective: This study was undertaken to identify the factors affecting early and late outcome following the Fontan procedure in the current era. We have…”
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standard set of accessions, microsatellites and genotypes for harmonising the fingerprinting of cherry collections for the ECPGR by Clarke, J.B, Tobutt, K.R

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The COVID-19 Drug and Gene Set Library by Kuleshov, Maxim V., Stein, Daniel J., Clarke, Daniel J.B., Kropiwnicki, Eryk, Jagodnik, Kathleen M., Bartal, Alon, Evangelista, John E., Hom, Jason, Cheng, Minxuan, Bailey, Allison, Zhou, Abigail, Ferguson, Laura B., Lachmann, Alexander, Ma'ayan, Avi

“…In a short period, many research publications that report sets of experimentally validated drugs as potential COVID-19 therapies have emerged. To organize this…”
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Protocol for using Multiomics2Targets to identify targets and driver kinases for cancer cohorts profiled with multi-omics assays by Marino, Giacomo B., Deng, Eden Z., Clarke, Daniel J.B., Diamant, Ido, Resnick, Adam C., Ma, Weiping, Wang, Pei, Ma’ayan, Avi

“…The availability of multi-omics data applied to profile cancer cohorts is rapidly increasing. Here, we present a protocol for Multiomics2Targets, a…”
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Influence of surgical strategies on outcome after the Norwood procedure by Griselli, Massimo, McGuirk, Simon P., Stümper, Oliver, Clarke, Andrew J.B., Miller, Paul, Dhillon, Rami, Wright, John G.C., de Giovanni, Joseph V., Barron, David J., Brawn, William J.

“…The study objective was to identify how the evolution of surgical strategies influenced the outcome after the Norwood procedure. From 1992 to 2004, 367…”
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Machine learning classification of chronic traumatic brain injury using diffusion tensor imaging and NODDI: A replication and extension study by Maurer, J. Michael, Harenski, Keith A., Paul, Subhadip, Vergara, Victor M., Stephenson, David D., Gullapalli, Aparna R., Anderson, Nathaniel E., Clarke, Gerard J.B., Nyalakanti, Prashanth K., Harenski, Carla L., Decety, Jean, Mayer, Andrew R., Arciniegas, David B., Calhoun, Vince D., Parrish, Todd B., Kiehl, Kent A.

“…Individuals with acute and chronic traumatic brain injury (TBI) are associated with unique white matter (WM) structural abnormalities, including fractional…”
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Circulatory arrest for repair of postcoarctation site aneurysm by Kang, Nicholas, Clarke, Andrew J.B, Nicholson, Ian A, Chard, Richard B

“…Aneurysm at previous coarctation repair may be seen more frequently as children operated for this condition survive into adulthood. We use deep hypothermic…”
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Preferential amplification of microsatellite alleles: an example in apple by Fernandez-Fernandez, F, Clarke, J.B, Tobutt, K.R

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Some new cherry microsatellites and their transferability to other stone fruits by Clarke, J.B, Ortega, E, Sutherland, B, Marchese, A, Tobutt, K.R

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Arterial switch operation in patients with Taussig–Bing anomaly — influence of staged repair and coronary anatomy on outcome by Griselli, Massimo, McGuirk, Simon P., Ko, Chung-Sen, Clarke, Andrew J.B., Barron, David J., Brawn, William J.

“…Objective: This study evaluated the results of arterial switch operation and closure of ventricular defects (ASO + VSDc) for double outlet right ventricle with…”
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Levosimendan for Low Cardiac Output: A Pediatric Experience by Egan, Jonathan R., Clarke, Andrew J. B., Williams, Stephen, Cole, Andrew D., Ayer, Julian, Jacobe, Stephen, Chard, Richard B., Winlaw, David S.

“…This was a retrospective observational study in a pediatric intensive care unit, in which 19 patients received levosimendan. There were no adverse events…”
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An Application of Outcomes Monitoring for Coronary Artery Bypass Surgery 2005–2008 at TPCH by Morton, Anthony Park, MD, MS, FFARACS, MSc Appl, Smith, Susan Erica, BSc (Hons), Mullany, Daniel V., FANZCA, FJICM, Clarke, Andrew J.B., FRACS, Wall, Douglas, FRACS, Pohlner, Peter, FRACS, GCM

“…Objective To describe monitoring of four years’ isolated coronary artery bypass surgery outcomes and complications at The Prince Charles Hospital, Brisbane,…”
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Gene Set Knowledge Discovery with Enrichr by Xie, Zhuorui, Bailey, Allison, Kuleshov, Maxim V, Clarke, Daniel J B, Evangelista, John E, Jenkins, Sherry L, Lachmann, Alexander, Wojciechowicz, Megan L, Kropiwnicki, Eryk, Jagodnik, Kathleen M, Jeon, Minji, Ma'ayan, Avi

“…Profiling samples from patients, tissues, and cells with genomics, transcriptomics, epigenomics, proteomics, and metabolomics ultimately produces lists of…”
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Enrichr-KG: bridging enrichment analysis across multiple libraries by Evangelista, John Erol, Xie, Zhuorui, Marino, Giacomo B, Nguyen, Nhi, Clarke, Daniel J B, Ma’ayan, Avi

“…Abstract Gene and protein set enrichment analysis is a critical step in the analysis of data collected from omics experiments. Enrichr is a popular gene set…”
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LINCS Data Portal 2.0: next generation access point for perturbation-response signatures by Stathias, Vasileios, Turner, John, Koleti, Amar, Vidovic, Dusica, Cooper, Daniel, Fazel-Najafabadi, Mehdi, Pilarczyk, Marcin, Terryn, Raymond, Chung, Caty, Umeano, Afoma, Clarke, Daniel J B, Lachmann, Alexander, Evangelista, John Erol, Ma’ayan, Avi, Medvedovic, Mario, Schürer, Stephan C

“…Abstract The Library of Integrated Network-Based Cellular Signatures (LINCS) is an NIH Common Fund program with the goal of generating a large-scale and…”
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Effect of retinal and/or extra-retinal information on age in memory-guided saccades by Burke, M. R, Clarke, J. B, Hedley, J

“…The aim of the study was to determine whether the addition of retinal or extra-retinal information could be used to improve memory-guided saccadic performance…”
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Interoperable RNA-Seq analysis in the cloud by Lachmann, Alexander, Clarke, Daniel J.B., Torre, Denis, Xie, Zhuorui, Ma'ayan, Avi

“…RNA-Sequencing (RNA-Seq) is currently the leading technology for genome-wide transcript quantification. Mapping the raw reads to transcript and gene level…”
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Systemic Inflammation Persists the First Year after Mild Traumatic Brain Injury: Results from the Prospective Trondheim Mild Traumatic Brain Injury Study by Chaban, Viktoriia, Clarke, Gerard J B, Skandsen, Toril, Islam, Rakibul, Einarsen, Cathrine E, Vik, Anne, Damås, Jan K, Mollnes, Tom E, Håberg, Asta K, Pischke, Soeren E

“…Innate immune activation has been attributed a key role in traumatic brain injury (TBI) and successive morbidity. In mild TBI (mTBI), however, the extent and…”
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SigCom LINCS: data and metadata search engine for a million gene expression signatures by Evangelista, John Erol, Clarke, Daniel J B, Xie, Zhuorui, Lachmann, Alexander, Jeon, Minji, Chen, Kerwin, Jagodnik, Kathleen M, Jenkins, Sherry L, Kuleshov, Maxim V, Wojciechowicz, Megan L, Schürer, Stephan C, Medvedovic, Mario, Ma’ayan, Avi

“…Abstract Millions of transcriptome samples were generated by the Library of Integrated Network-based Cellular Signatures (LINCS) program. When these data are…”
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Development of a new apple rootstock framework map by Evans, K.M, Fernandez-Fernandez, F, Govan, C.L, Clarke, J.B, Tobutt, K.R

“…Rootstock breeding at East Malling began in the 1920s and is still active. A new East Malling Rootstock Club was established in April 2008 with support from…”
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