Search Results - "Clark, Kenzie A."
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Charting an Unexplored Streptococcal Biosynthetic Landscape Reveals a Unique Peptide Cyclization Motif
Published in Journal of the American Chemical Society (19-12-2018)“…Peptide natural products are often used as signals or antibiotics and contain unusual structural modifications, thus providing opportunities for expanding our…”
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Aliphatic Ether Bond Formation Expands the Scope of Radical SAM Enzymes in Natural Product Biosynthesis
Published in Journal of the American Chemical Society (10-07-2019)“…The biosynthetic pathways of microbial natural products provide a rich source of novel enzyme-catalyzed transformations. Using a new bioinformatic search…”
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Bioinformatic Atlas of Radical SAM Enzyme-Modified RiPP Natural Products Reveals an Isoleucine–Tryptophan Crosslink
Published in Journal of the American Chemical Society (05-10-2022)“…Ribosomally synthesized and post-translationally modified peptides (RiPPs) are a growing family of natural products with diverse activities and structures…”
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Radical Approach to Enzymatic β‑Thioether Bond Formation
Published in Journal of the American Chemical Society (16-01-2019)“…Ribosomally synthesized and post-translationally modified peptides (RiPPs) are an emerging class of natural products that harbor diverse chemical…”
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Biosynthesis-guided discovery reveals enteropeptins as alternative sactipeptides containing N-methylornithine
Published in Nature chemistry (01-12-2022)“…The combination of next-generation DNA sequencing technologies and bioinformatics has revitalized natural product discovery. Using a bioinformatic search…”
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Bicyclostreptins are radical SAM enzyme-modified peptides with unique cyclization motifs
Published in Nature chemical biology (01-10-2022)“…Microbial natural products comprise diverse architectures that are generated by equally diverse biosynthetic strategies. In peptide natural products, amino…”
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N–Cα Bond Cleavage Catalyzed by a Multinuclear Iron Oxygenase from a Divergent Methanobactin-like RiPP Gene Cluster
Published in Journal of the American Chemical Society (20-03-2024)“…DUF692 multinuclear iron oxygenases (MNIOs) are an emerging family of tailoring enzymes involved in the biosynthesis of ribosomally synthesized and…”
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Expanding the Landscape of Noncanonical Amino Acids in RiPP Biosynthesis
Published in Journal of the American Chemical Society (14-02-2024)“…Advancements in DNA sequencing technologies and bioinformatics have enabled the discovery of new metabolic reactions from overlooked microbial species and…”
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RaS-RiPPs in Streptococci and the Human Microbiome
Published in ACS bio & med chem au (17-08-2022)“…Radical S-adenosylmethionine (RaS) enzymes have quickly advanced to one of the most abundant and versatile enzyme superfamilies known. Their chemistry is…”
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Structural basis for virulence regulation in Vibrio cholerae by unsaturated fatty acid components of bile
Published in Communications biology (28-11-2019)“…The AraC/XylS-family transcriptional regulator ToxT is the master virulence activator of Vibrio cholerae , the gram-negative bacterial pathogen that causes the…”
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A bipartite network approach to inferring interactions between environmental exposures and human diseases
Published in Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2015)“…Environmental exposure is a key factor of understanding health and diseases. Beyond genetic propensities, many disorders are, in part, caused by human…”
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Structural basis for virulence regulation in Vibrio cholerae by unsaturated fatty acid components of bile
Published in Communications biology (28-11-2019)“…The AraC/XylS-family transcriptional regulator ToxT is the master virulence activator of Vibrio cholerae, the gram-negative bacterial pathogen that causes the…”
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