Search Results - "Choi, Beom Soon"

The genome of the freshwater water flea Daphnia magna: A potential use for freshwater molecular ecotoxicology by Lee, Bo-Young, Choi, Beom-Soon, Kim, Min-Sub, Park, Jun Chul, Jeong, Chang-Bum, Han, Jeonghoon, Lee, Jae-Seong

“…•The total length of the D. magna genome was about 123 Mb with N50 = 10.1 Mb.•The number of scaffolds was 4,193 including 10 LGs.•A total of 15,721 genes were…”
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Genome-enabled discovery of anthraquinone biosynthesis in Senna tora by Kang, Sang-Ho, Pandey, Ramesh Prasad, Lee, Chang-Muk, Sim, Joon-Soo, Jeong, Jin-Tae, Choi, Beom-Soon, Jung, Myunghee, Ginzburg, Daniel, Zhao, Kangmei, Won, So Youn, Oh, Tae-Jin, Yu, Yeisoo, Kim, Nam-Hoon, Lee, Ok Ran, Lee, Tae-Ho, Bashyal, Puspalata, Kim, Tae-Su, Lee, Woo-Haeng, Hawkins, Charles, Kim, Chang-Kug, Kim, Jung Sun, Ahn, Byoung Ohg, Rhee, Seung Yon, Sohng, Jae Kyung

“…Senna tora is a widely used medicinal plant. Its health benefits have been attributed to the large quantity of anthraquinones, but how they are made in plants…”
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Genome and evolution of the shade‐requiring medicinal herb Panax ginseng by Kim, Nam‐Hoon, Jayakodi, Murukarthick, Lee, Sang‐Choon, Choi, Beom‐Soon, Jang, Woojong, Lee, Junki, Kim, Hyun Hee, Waminal, Nomar E., Lakshmanan, Meiyappan, Nguyen, Binh, Lee, Yun Sun, Park, Hyun‐Seung, Koo, Hyun Jo, Park, Jee Young, Perumal, Sampath, Joh, Ho Jun, Lee, Hana, Kim, Jinkyung, Kim, In Seo, Kim, Kyunghee, Koduru, Lokanand, Kang, Kyo Bin, Sung, Sang Hyun, Yu, Yeisoo, Park, Daniel S., Choi, Doil, Seo, Eunyoung, Kim, Seungill, Kim, Young‐Chang, Hyun, Dong Yun, Park, Youn‐Il, Kim, Changsoo, Lee, Tae‐Ho, Kim, Hyun Uk, Soh, Moon Soo, Lee, Yi, In, Jun Gyo, Kim, Heui‐Soo, Kim, Yong‐Min, Yang, Deok‐Chun, Wing, Rod A., Lee, Dong‐Yup, Paterson, Andrew H., Yang, Tae‐Jin

“…Summary Panax ginseng C. A. Meyer, reputed as the king of medicinal herbs, has slow growth, long generation time, low seed production and complicated genome…”
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Ginseng Genome Database: an open-access platform for genomics of Panax ginseng by Jayakodi, Murukarthick, Choi, Beom-Soon, Lee, Sang-Choon, Kim, Nam-Hoon, Park, Jee Young, Jang, Woojong, Lakshmanan, Meiyappan, Mohan, Shobhana V G, Lee, Dong-Yup, Yang, Tae-Jin

“…The ginseng (Panax ginseng C.A. Meyer) is a perennial herbaceous plant that has been used in traditional oriental medicine for thousands of years…”
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Uncovering the novel characteristics of Asian honey bee, Apis cerana, by whole genome sequencing by Park, Doori, Jung, Je Won, Choi, Beom-Soon, Jayakodi, Murukarthick, Lee, Jeongsoo, Lim, Jongsung, Yu, Yeisoo, Choi, Yong-Soo, Lee, Myeong-Lyeol, Park, Yoonseong, Choi, Ik-Young, Yang, Tae-Jin, Edwards, Owain R, Nah, Gyoungju, Kwon, Hyung Wook

“…The honey bee is an important model system for increasing understanding of molecular and neural mechanisms underlying social behaviors relevant to the…”
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Complete chloroplast and ribosomal sequences for 30 accessions elucidate evolution of Oryza AA genome species by Kim, Kyunghee, Lee, Sang-Choon, Lee, Junki, Yu, Yeisoo, Yang, Kiwoung, Choi, Beom-Soon, Koh, Hee-Jong, Waminal, Nomar Espinosa, Choi, Hong-Il, Kim, Nam-Hoon, Jang, Woojong, Park, Hyun-Seung, Lee, Jonghoon, Lee, Hyun Oh, Joh, Ho Jun, Lee, Hyeon Ju, Park, Jee Young, Perumal, Sampath, Jayakodi, Murukarthick, Lee, Yun Sun, Kim, Backki, Copetti, Dario, Kim, Soonok, Kim, Sunggil, Lim, Ki-Byung, Kim, Young-Dong, Lee, Jungho, Cho, Kwang-Su, Park, Beom-Seok, Wing, Rod A., Yang, Tae-Jin

“…Cytoplasmic chloroplast (cp) genomes and nuclear ribosomal DNA (nR) are the primary sequences used to understand plant diversity and evolution. We introduce a…”
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Genotyping-by-sequencing map permits identification of clubroot resistance QTLs and revision of the reference genome assembly in cabbage (Brassica oleracea L.) by Lee, Jonghoon, Izzah, Nur Kholilatul, Choi, Beom-Soon, Joh, Ho Jun, Lee, Sang-Choon, Perumal, Sampath, Seo, Joodeok, Ahn, Kyounggu, Jo, Eun Ju, Choi, Gyung Ja, Nou, Ill-Sup, Yu, Yeisoo, Yang, Tae-Jin

“…Clubroot is a devastating disease caused by Plasmodiophora brassicae and results in severe losses of yield and quality in Brassica crops. Many clubroot…”
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The genome of the harpacticoid copepod Tigriopus japonicus: Potential for its use in marine molecular ecotoxicology by Jeong, Chang-Bum, Lee, Bo-Young, Choi, Beom-Soon, Kim, Min-Sub, Park, Jun Chul, Kim, Duck-Hyun, Wang, Minghua, Park, Heum Gi, Lee, Jae-Seong

“…•The whole genome of T. japonicus was sequenced and assembled.•The total length of assembled genome of T. japonicus was 196.6 Mb with an N50 = 10.65 Mb.•25,143…”
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The genome of the marine rotifer Brachionus koreanus sheds light on the antioxidative defense system in response to 2-ethyl-phenanthrene and piperonyl butoxide by Park, Jun Chul, Choi, Beom-Soon, Kim, Min-Sub, Shi, Huahong, Zhou, Bingsheng, Park, Heum Gi, Lee, Jae-Seong

“…[Display omitted] •The total length of the assembled genome was 85.7 Mb•The final number of scaffolds was 567 with an N50 value of 1.86 Mb.•A total of 14,975…”
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The genome of the European estuarine calanoid copepod Eurytemora affinis: Potential use in molecular ecotoxicology by Choi, Beom-Soon, Kim, Duck-Hyun, Kim, Min-Sub, Park, Jun Chul, Lee, Young Hwan, Kim, Hee-Jin, Jeong, Chang-Bum, Hagiwara, Atsushi, Souissi, Sami, Lee, Jae-Seong

“…In this study, we sequenced and assembled the genome of a European estuarine calanoid copepod using Oxford Nanopore PromethION and Illumina HiSeq 2500…”
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Complete mitochondrial genome sequence and identification of a candidate gene responsible for cytoplasmic male sterility in radish (Raphanus sativus L.) containing DCGMS cytoplasm by Park, Jee Young, Lee, Young-Pyo, Lee, Jonghoon, Choi, Beom-Soon, Kim, Sunggil, Yang, Tae-Jin

“…A novel cytoplasmic male sterility (CMS) conferred by Dongbu cytoplasmic and genic male-sterility (DCGMS) cytoplasm and its restorer-of-fertility gene (Rfd1)…”
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Nanopore sequencing reads improve assembly and gene annotation of the Parochlus steinenii genome by Shin, Seung Chul, Kim, Hyun, Lee, Jun Hyuck, Kim, Han-Woo, Park, Joonho, Choi, Beom-Soon, Lee, Sang-Choon, Kim, Ji Hee, Lee, Hyoungseok, Kim, Sanghee

“…Parochlus steinenii is a winged midge from King George Island. It is cold-tolerant and endures the harsh Antarctic winter. Previously, we reported the genome…”
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Identifying Terpenoid Biosynthesis Genes in Euphorbia maculata via Full-Length cDNA Sequencing by Jeon, Mi Jin, Roy, Neha Samir, Choi, Beom-Soon, Oh, Ji Yeon, Kim, Yong-In, Park, Hye Yoon, Um, Taeyoung, Kim, Nam-Soo, Kim, Soonok, Choi, Ik-Young

“…The annual herb Euphorbia maculata L. produces anti-inflammatory and biologically active substances such as triterpenoids, tannins, and polyphenols, and it is…”
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Gibberellic acid sensitive dwarf encodes an ARPC2 subunit that mediates gibberellic acid biosynthesis, effects to grain yield in rice by Um, Tae Young, Hong, So Yeon, Han, Ji Sung, Jung, Ki Hong, Moon, Sunok, Choi, Beom-Soon, Basnet, Prakash, Chung, Young Soo, Lee, Seon Woo, Yang, Won Tae, Kim, Doh Hoon

“…The plant hormone gibberellic acid (GA) is important for plant growth and productivity. Actin-related proteins (ARPs) also play central roles in plant growth,…”
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Genome-wide comparative analysis of the Brassica rapa gene space reveals genome shrinkage and differential loss of duplicated genes after whole genome triplication by Mun, Jeong-Hwan, Kwon, Soo-Jin, Yang, Tae-Jin, Seol, Young-Joo, Jin, Mina, Kim, Jin-A, Lim, Myung-Ho, Kim, Jung Sun, Baek, Seunghoon, Choi, Beom-Soon, Yu, Hee-Ju, Kim, Dae-Soo, Kim, Namshin, Lim, Ki-Byung, Lee, Soo-In, Hahn, Jang-Ho, Lim, Yong Pyo, Bancroft, Ian, Park, Beom-Seok

“…Brassica rapa is one of the most economically important vegetable crops worldwide. Owing to its agronomic importance and phylogenetic position, B. rapa…”
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Re-exploration of U’s Triangle Brassica Species Based on Chloroplast Genomes and 45S nrDNA Sequences by Kim, Chang-Kug, Seol, Young-Joo, Perumal, Sampath, Lee, Jonghoon, Waminal, Nomar Espinosa, Jayakodi, Murukarthick, Lee, Sang-Choon, Jin, Seungwoo, Choi, Beom-Soon, Yu, Yeisoo, Ko, Ho-Cheol, Choi, Ji-Weon, Ryu, Kyoung-Yul, Sohn, Seong-Han, Parkin, Isobel, Yang, Tae-Jin

“…The concept of U’s triangle, which revealed the importance of polyploidization in plant genome evolution, described natural allopolyploidization events in…”
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Genome Assembly and Annotation of Soft-Shelled Adlay ( Coix lacryma-jobi Variety ma-yuen ), a Cereal and Medicinal Crop in the Poaceae Family by Kang, Sang-Ho, Kim, Byeollee, Choi, Beom-Soon, Lee, Hyun Oh, Kim, Nam-Hoon, Lee, Seung Jae, Kim, Hye Sik, Shin, Myung Ju, Kim, Hyo-Won, Nam, Kyunghyun, Kang, Kyoung Dae, Kwon, Soo-Jin, Oh, Tae-Jin, Lee, Sang-Choon, Kim, Chang-Kug

“…, also called adlay or Job's tears, is an annual herbal plant belonging to the Poaceae family that has been cultivated as a cereal and medicinal crop in Asia…”
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The genome of the marine water flea Diaphanosoma celebensis: Identification of phase I, II, and III detoxification genes and potential applications in marine molecular ecotoxicology by Kim, Duck-Hyun, Choi, Beom-Soon, Kang, Hye-Min, Park, Jun Chul, Kim, Min-Sub, Hagiwara, Atsushi, Lee, Jae-Seong

“…To assemble the genome of the marine water flea Diaphanosoma celebensis, a sentinel model for marine environmental monitoring, we constructed a high-quality…”
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Diversity, distribution, and significance of transposable elements in the genome of the only selfing hermaphroditic vertebrate Kryptolebias marmoratus by Rhee, Jae-Sung, Choi, Beom-Soon, Kim, Jaebum, Kim, Bo-Mi, Lee, Young-Mi, Kim, Il-Chan, Kanamori, Akira, Choi, Ik-Young, Schartl, Manfred, Lee, Jae-Seong

“…The Kryptolebias marmoratus is unique because it is the only self-fertilizing hermaphroditic vertebrate, known to date. It primarily reproduces by internal…”
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Genome-wide comparative analysis of 20 miniature inverted-repeat transposable element families in Brassica rapa and B. oleracea by Sampath, Perumal, Murukarthick, Jayakodi, Izzah, Nur Kholilatul, Lee, Jonghoon, Choi, Hong-Il, Shirasawa, Kenta, Choi, Beom-Soon, Liu, Shengyi, Nou, Ill-Sup, Yang, Tae-Jin

“…Miniature inverted-repeat transposable elements (MITEs) are ubiquitous, non-autonomous class II transposable elements. Here, we conducted genome-wide…”
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