Search Results - "Cheng-Yan Kao"

Gene expression-based chemical genomics identifies potential therapeutic drugs in hepatocellular carcinoma by Chen, Ming-Huang, Yang, Wu-Lung R, Lin, Kuan-Ting, Liu, Chia-Hung, Liu, Yu-Wen, Huang, Kai-Wen, Chang, Peter Mu-Hsin, Lai, Jin-Mei, Hsu, Chun-Nan, Chao, Kun-Mao, Kao, Cheng-Yan, Huang, Chi-Ying F

“…Hepatocellular carcinoma (HCC) is an aggressive tumor with a poor prognosis. Currently, only sorafenib is approved by the FDA for advanced HCC treatment;…”
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Prevalence of intestinal parasitic infections among school children in capital areas of the Democratic Republic of São Tomé and Príncipe, West Africa by Liao,Chien-Wei, Fu,Chung-Jung, Kao,Cheng-Yan, Lee,Yueh-Lun, Chen,Po-Ching, Chuang,Ting-Wu, Toshio, Naito, Chou,Chia-Mei, Ying-Chie, Huang, Bonfim,Idalina

“…Background: Although the Democratic Republic of Sao Tome and Principe (DRSTP) has undertaken school children-based deworming programs against intestinal…”
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Construction and analysis of the protein-protein interaction networks for schizophrenia, bipolar disorder, and major depression by Lee, Sheng-An, Tsao, Theresa Tsun-Hui, Yang, Ko-Chun, Lin, Han, Kuo, Yu-Lun, Hsu, Chien-Hsiang, Lee, Wen-Kuei, Huang, Kuo-Chuan, Kao, Cheng-Yan

“…Schizophrenia, bipolar disorder, and major depression are devastating mental diseases, each with distinctive yet overlapping epidemiologic characteristics…”
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Analysis of Protein-Protein Interactions in Cross-talk Pathways Reveals CRKL Protein as a Novel Prognostic Marker in Hepatocellular Carcinoma by Liu, Chia-Hung, Chen, Tzu-Chi, Chau, Gar-Yang, Jan, Yi-Hua, Chen, Chun-Houh, Hsu, Chun-Nan, Lin, Kuan-Ting, Juang, Yue-Li, Lu, Pei-Jung, Cheng, Hui-Chuan, Chen, Ming-Huang, Chang, Chia-Fen, Ting, Yu-Shan, Kao, Cheng-Yan, Hsiao, Michael, Huang, Chi-Ying F.

“…Deciphering the network of signaling pathways in cancer via protein-protein interactions (PPIs) at the cellular level is a promising approach but remains…”
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A stochastic differential equation model for quantifying transcriptional regulatory network in Saccharomyces cerevisiae by Chen, Kuang-Chi, Wang, Tse-Yi, Tseng, Huei-Hun, Huang, Chi-Ying F., Kao, Cheng-Yan

“…Motivation: The explosion of microarray studies has promised to shed light on the temporal expression patterns of thousands of genes simultaneously. However,…”
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SeqEntropy: genome-wide assessment of repeats for short read sequencing by Chu, Hsueh-Ting, Hsiao, William W L, Tsao, Theresa T H, Hsu, D Frank, Chen, Chaur-Chin, Lee, Sheng-An, Kao, Cheng-Yan

“…Recent studies on genome assembly from short-read sequencing data reported the limitation of this technology to reconstruct the entire genome even at very high…”
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Gene Expression Profiling and Pathway Network Analysis Predicts a Novel Antitumor Function for a Botanical-Derived Drug, PG2 by Kao, Cheng-Yan, Huang, Chi-Ying F., Huang, Tse-Hung, Chang, Peter Mu-Hsin, Hsu, Wei-Hsiang, Lin, Wey-Jinq, Hua, Wei-Kai, Chuang, Tsung-Hsien, Chen, Chun-Houh, Kuo, Yu-Lun, Hsu, Shih-Lan

“…PG2 is a botanical drug that is mostly composed of Astragalus polysaccharides (APS). Its role in hematopoiesis and relieving cancer-related fatigue has…”
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Reconstruction of human protein interolog network using evolutionary conserved network by Huang, Tao-Wei, Lin, Chung-Yen, Kao, Cheng-Yan

“…The recent increase in the use of high-throughput two-hybrid analysis has generated large quantities of data on protein interactions. Specifically, the…”
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POINeT: protein interactome with sub-network analysis and hub prioritization by Lee, Sheng-An, Chan, Chen-Hsiung, Chen, Tzu-Chi, Yang, Chia-Ying, Huang, Kuo-Chuan, Tsai, Chi-Hung, Lai, Jin-Mei, Wang, Feng-Sheng, Kao, Cheng-Yan, Huang, Chi-Ying F

“…Protein-protein interactions (PPIs) are critical to every aspect of biological processes. Expansion of all PPIs from a set of given queries often results in a…”
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POINT: a database for the prediction of protein–protein interactions based on the orthologous interactome by Huang, Tao-Wei, Tien, An-Chi, Huang, Wen-Shien, Lee, Yuan-Chii G., Peng, Chin-Lin, Tseng, Huei-Hun, Kao, Cheng-Yan, Huang, Chi-Ying F.

“…One possible path towards understanding the biological function of a target protein is through the discovery of how it interfaces within protein–protein…”
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MetaABC-an integrated metagenomics platform for data adjustment, binning and clustering by Su, Chien-Hao, Hsu, Ming-Tsung, Wang, Tse−Yi, Chiang, Sufeng, Cheng, Jen-Hao, Weng, Francis C., Kao, Cheng−Yan, Wang, Daryi, Tsai, Huai-Kuang

“…MetaABC is a metagenomic platform that integrates several binning tools coupled with methods for removing artifacts, analyzing unassigned reads and controlling…”
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A quantitative analysis of monochromaticity in genetic interaction networks by Hsu, Chien-Hsiang, Wang, Tse-Yi, Chu, Hsueh-Ting, Kao, Cheng-Yan, Chen, Kuang-Chi

“…A genetic interaction refers to the deviation of phenotypes from the expected when perturbing two genes simultaneously. Studying genetic interactions help…”
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Quantitative assessment of mitochondrial DNA copies from whole genome sequencing by Chu, Hsueh-Ting, Hsiao, William W L, Tsao, Theresa T H, Chang, Ching-Mao, Liu, Yen-Wenn, Fan, Chen-Chieh, Lin, Han, Chang, Hen-Hong, Yeh, Tze-Jung, Chen, Jen-Chih, Huang, Dun-Ming, Chen, Chaur-Chin, Kao, Cheng-Yan

“…Mitochondrial dysfunction is associated with various aging diseases. The copy number of mtDNA in human cells may therefore be a potential biomarker for…”
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Improving disulfide connectivity prediction with sequential distance between oxidized cysteines by Tsai, Chi-Hung, Chen, Bo-Juen, Chan, Chen-hsiung, Liu, Hsuan-Liang, Kao, Cheng-Yan

“…Predicting disulfide connectivity precisely helps towards the solution of protein structure prediction. In this study, a descriptor derived from the sequential…”
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From Midbody Protein−Protein Interaction Network Construction to Novel Regulators in Cytokinesis by Chen, Tzu-Chi, Lee, Sheng-An, Hong, Tse-Ming, Shih, Jin-Yuan, Lai, Jin-Mei, Chiou, Hsin-Ying, Yang, Shuenn-Chen, Chan, Chen-Hsiung, Kao, Cheng-Yan, Yang, Pan-Chyr, Huang, Chi-Ying F

“…Midbody, a transient organelle-like structure, is known as central for abscission and is indispensable for termination of cytokinesis. Here, we used the…”
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An evolutionary algorithm for large traveling salesman problems by Tsai, Huai-Kuang, Yang, Jinn-Moon, Tsai, Yuan-Fang, Kao, Cheng-Yan

“…This work proposes an evolutionary algorithm, called the heterogeneous selection evolutionary algorithm (HeSEA), for solving large traveling salesman problems…”
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Disulfide connectivity prediction with 70% accuracy using two-level models by Chen, Bo-Juen, Tsai, Chi-Hung, Chan, Chen-hsiung, Kao, Cheng-Yan

“…Disulfide bridges stabilize protein structures covalently and play an important role in protein folding. Predicting disulfide connectivity precisely helps…”
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Co-expression of neighboring genes in the zebrafish (Danio rerio) genome by Tsai, Huai-Kuang, Huang, Pei-Ying, Kao, Cheng-Yan, Wang, Daryi

“…Neighboring genes in the eukaryotic genome have a tendency to express concurrently, and the proximity of two adjacent genes is often considered a possible…”
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Detection of the inferred interaction network in hepatocellular carcinoma from EHCO (Encyclopedia of Hepatocellular Carcinoma genes Online) by Hsu, Chun-Nan, Lai, Jin-Mei, Liu, Chia-Hung, Tseng, Huei-Hun, Lin, Chih-Yun, Lin, Kuan-Ting, Yeh, Hsu-Hua, Sung, Ting-Yi, Hsu, Wen-Lian, Su, Li-Jen, Lee, Sheng-An, Chen, Chang-Han, Lee, Gen-Cher, Lee, D T, Shiue, Yow-Ling, Yeh, Chang-Wei, Chang, Chao-Hui, Kao, Cheng-Yan, Huang, Chi-Ying F

“…The significant advances in microarray and proteomics analyses have resulted in an exponential increase in potential new targets and have promised to shed…”
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Seroprevalence and Associated Risk Factors of Toxocariasis among College Students in Taipei City, Taiwan by Fu, Chung-Jung, Kao, Cheng-Yan, Lee, Yueh-Lun, Liao, Chien-Wei, Chen, Po-Ching, Chuang, Ting-Wu, Wang, Ying-Chin, Chou, Chia-Mei, Huang, Ying-Chie, Naito, Toshio, Fan, Chia-Kwung

“…Infection by Toxocara spp. is known to be significantly associated with partial epilepsy. It has become popular for people to raise dogs/cats as pets and…”
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