Search Results - "Chen, Shaoqiu"

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    Missing Value Imputation Approach for Mass Spectrometry-based Metabolomics Data by Wei, Runmin, Wang, Jingye, Su, Mingming, Jia, Erik, Chen, Shaoqiu, Chen, Tianlu, Ni, Yan

    Published in Scientific reports (12-01-2018)
    “…Missing values exist widely in mass-spectrometry (MS) based metabolomics data. Various methods have been applied for handling missing values, but the selection…”
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    Age-related compositional changes and correlations of gut microbiome, serum metabolome, and immune factor in rats by Zhang, Xia, Yang, Yuping, Su, Juan, Zheng, Xiaojiao, Wang, Chongchong, Chen, Shaoqiu, Liu, Jiajian, Lv, Yingfang, Fan, Shihao, Zhao, Aihua, Chen, Tianlu, Jia, Wei, Wang, Xiaoyan

    Published in GeroScience (01-04-2021)
    “…Aging is a complex physiological process associated with degenerative disorder of metabolism and immune function, which contributes to the occurrence of senile…”
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    Identification of Key Biomarkers in Systemic Lupus Erythematosus by a Multi-Cohort Analysis by Wei, Meilin, Dong, Qiguan, Chen, Shaoqiu, Wang, Junlong, Yang, Hua, Xiong, Qin

    Published in Frontiers in immunology (04-07-2022)
    “…Systemic lupus erythematosus (SLE) is an autoimmune disease that affects multiple body systems with heterogeneous clinical manifestations. Since gene…”
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    Comprehensive Analysis of a tRNA-Derived Small RNA in Colorectal Cancer by Zhu, Yong, Chen, Shaoqiu, Ling, Zhougui, Winnicki, Andrew, Xu, Lilly, Xu, Shaun, Gong, Ting, Jiang, Bin, Huang, Gang, Deng, Youping

    Published in Frontiers in oncology (04-08-2021)
    “…Colorectal cancer often presents as a highly variable disease with myriad forms that are at times difficult to detect in early screenings with sufficient…”
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    Development of a tRNA-derived small RNA diagnostic and prognostic signature in liver cancer by Zuo, Yi, Chen, Shaoqiu, Yan, Lingling, Hu, Ling, Bowler, Scott, Zitello, Emory, Huang, Gang, Deng, Youping

    Published in Genes & diseases (01-03-2022)
    “…Liver cancer presents divergent clinical behaviors. There remain opportunities for molecular markers to improve liver cancer diagnosis and prognosis,…”
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  7. 7

    Association of Septic Shock with Mortality in Hospitalized COVID-19 Patients in Wuhan, China by Chen, Shaoqiu, Gao, Zitong, Hu, Ling, Zuo, Yi, Fu, Yuanyuan, Wei, Meilin, Zitello, Emory, Huang, Gang, Deng, Youping

    Published in Advances in virology (23-04-2022)
    “…Purpose. Septic shock is a severe complication of COVID-19 patients. We aim to identify risk factors associated with septic shock and mortality among COVID-19…”
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    Comprehensive landscape of tRNA-derived fragments in lung cancer by Gao, Zitong, Jijiwa, Mayumi, Nasu, Masaki, Borgard, Heather, Gong, Ting, Xu, Jinwen, Chen, Shaoqiu, Fu, Yuanyuan, Chen, Yu, Hu, Xiamin, Huang, Gang, Deng, Youping

    Published in Molecular therapy. Oncolytics (15-09-2022)
    “…Transfer RNA (tRNA)-derived fragment (tRDF) is a novel small non-coding RNA that presents in different types of cancer. The comprehensive understanding of…”
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  9. 9

    Mitochondria-derived small RNAs as diagnostic biomarkers in lung cancer patients through a novel ratio-based expression analysis methodology by Yu, Zongtao, Chen, Shaoqiu, Tang, Zhenming, Tang, Ying, Ling, Zhougui, Wang, Hongwei, Gong, Ting, Gao, Zitong, Devendra, Gehan, Huang, Gang, Chen, Wei, Deng, Youping

    Published in Genes & diseases (01-05-2023)
    “…Small non-coding RNAs are potential diagnostic biomarkers for lung cancer. Mitochondria-derived small RNA (mtRNA) is a novel regulatory small non-coding RNA…”
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  10. 10

    Prognostic Factors for COVID-19 Hospitalized Patients with Preexisting Type 2 Diabetes by Fu, Yuanyuan, Hu, Ling, Ren, Hong-Wei, Zuo, Yi, Chen, Shaoqiu, Zhang, Qiu-Shi, Shao, Chen, Ma, Yao, Wu, Lin, Hao, Jun-Jie, Wang, Chuan-Zhen, Wang, Zhanwei, Yanagihara, Richard, Deng, Youping

    Published in International journal of endocrinology (17-01-2022)
    “…Background. Type 2 diabetes (T2D) as a worldwide chronic disease combined with the COVID-19 pandemic prompts the need for improving the management of…”
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    Abstract LB-249: PiRADL: An advanced deep learning tool for piRNA detection and its application in cancer biomarker identification by Chen, Shaoqiu, Deng, Youping

    Published in Cancer research (Chicago, Ill.) (15-08-2020)
    “…Abstract PIWI-interacting RNAs (piRNAs) are a large class of non-coding RNAs expressed in animal cells. Although many programs involved in identifying piRNAs…”
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    Flow friction and heat transfer characteristics evaluation for a rectangular channel with spherical dimples and protrusions by Kong, Dehai, Isaev, S.А., Li, Wei, Chen, Shaoqiu, Liu, Cunliang, Guo, Tao

    Published in International journal of thermal sciences (01-01-2024)
    “…This study numerically investigated the turbulent flow and heat transfer in a rectangular channel with spherical dimples (SDs) and protrusions (SPs) having…”
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    Strategy for an Association Study of the Intestinal Microbiome and Brain Metabolome Across the Lifespan of Rats by Chen, Tianlu, You, Yijun, Xie, Guoxiang, Zheng, Xiaojiao, Zhao, Aihua, Liu, Jiajian, Zhao, Qing, Wang, Shouli, Huang, Fengjie, Rajani, Cynthia, Wang, Congcong, Chen, Shaoqiu, Ni, Yan, Yu, Herbert, Deng, Youping, Wang, Xiaoyan, Jia, Wei

    Published in Analytical chemistry (Washington) (20-02-2018)
    “…There is increased appreciation for the diverse roles of the microbiome-gut-brain axis on mammalian growth and health throughout the lifespan. Numerous studies…”
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  16. 16

    Analysis and Performance Assessment of the Whole Genome Bisulfite Sequencing Data Workflow: Currently Available Tools and a Practical Guide to Advance DNA Methylation Studies by Gong, Ting, Borgard, Heather, Zhang, Zao, Chen, Shaoqiu, Gao, Zitong, Deng, Youping

    Published in Small methods (01-03-2022)
    “…DNA methylation is associated with transcriptional repression, genomic imprinting, stem cell differentiation, embryonic development, and inflammation. Aberrant…”
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  17. 17

    Metabolomics in Cancer Biomarker Research by Wang, Xiaoyan, Chen, Shaoqiu, Jia, Wei

    Published in Current pharmacology reports (01-12-2016)
    “…Purpose of Review As a research tool for quantitative measurement of small molecule metabolites, metabolomics has been devoted to search for biomarkers that…”
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    Abstract 1241: Six potential biomarkers for non-small cell lung cancer diagnosis and prognosis by Gao, Zitong, Jijiwa, Mayumi, Nasu, Masaki, Borgard, Heather, Xu, Jinwen, Gong, Ting, Chen, Shaoqiu, Fu, Yuanyuan, Deng, Youping

    Published in Cancer research (Chicago, Ill.) (15-06-2022)
    “…Abstract tRNA-derived fragment (tRDF) is novel small non-coding RNA that presences in different types of cancer tissue. More evidence has shown that tRDFs are…”
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    Heat-Stress-Induced Metabolic Changes and Altered Male Reproductive Function by Hou, Yuanlong, Wang, Xiaoyan, Lei, Zhihai, Ping, Jihui, Liu, jiajian, Ma, Zhiyu, Zhang, Zheng, Jia, Cuicui, Jin, Mengmeng, Li, Xiang, Li, Xiaoliang, Chen, Shaoqiu, Lv, Yingfang, Gao, Yingdong, Jia, Wei, Su, Juan

    Published in Journal of proteome research (06-03-2015)
    “…Heat stress can cause systemic physiological and biochemical alterations in living organisms. In reproductive systems, heat stress induces germ cell loss and…”
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