Hydrogenophaga crocea sp. nov. associated with cyanobacterial mat isolated from farmland mud

A catalase and oxidase-positive strain BA0156 T was isolated from a cyanobacterial mat collected from the farmland mud cultivated with sugarcane from Ahmednagar, India. The 16S rRNA gene of strain BA0156 T showed the highest percent sequence similarity with Hydrogenophaga borbori LMG 30805 T (98.5%)...

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Bibliographic Details
Published in:	Archives of microbiology Vol. 204; no. 5; p. 265
Main Authors:	Thorat, Vipool, Tiwarekar, Bhavesh, Kirdat, Kiran, Chavan, Saurabhee, Markad, Shital, Sathe, Shivaji, Lodha, Tushar, Yadav, Amit
Format:	Journal Article
Language:	English
Published:	Berlin/Heidelberg Springer Berlin Heidelberg 01-05-2022 Springer Nature B.V
Subjects:	Agricultural land Archives & records Bacterial Typing Techniques Biochemistry Biomedical and Life Sciences Biotechnology Cardiolipin Catalase Cell Biology Comamonadaceae Cyanobacteria - genetics DNA, Bacterial - chemistry DNA, Bacterial - genetics Ecology Farms Fatty acids Fatty Acids - analysis Genomes Hydrogenophaga Life Sciences Lipids Microbial Ecology Microbiology Motility Mud New species Original Paper Phosphatidylethanolamine Phospholipids - analysis Phylogenetics Phylogeny Physiology RNA, Ribosomal, 16S - genetics rRNA 16S Salinity Sequence Analysis, DNA Sugarcane Hydrogenase Hydrogen utilization Hydrogenophaga
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Summary:	A catalase and oxidase-positive strain BA0156 T was isolated from a cyanobacterial mat collected from the farmland mud cultivated with sugarcane from Ahmednagar, India. The 16S rRNA gene of strain BA0156 T showed the highest percent sequence similarity with Hydrogenophaga borbori LMG 30805 T (98.5%), followed by H. flava DSM 619 T (98.3%) and H. intermedia DSM 5680 T (98.2%). The strain BA0156 T contained the major fatty acids, C 16:0 (25.1%) and C 17:0 cyclo (3.9%), whereas phosphatidylethanolamine and diphosphatidylglycerol were the major polar lipids. The OrthoANI and dDDH values between strain BA0156 T and its closest relative H. borbori LMG 30805 T were 84.6% and 28.3%, respectively. The DNA G+C content of strain BA0156 T was 69.4 mol %. Furthermore, the biochemical and physiological features of strain BA0156 T showed a distinct pattern from their closest phylogenetic neighbours. The phenotypic, genotypic and chemotaxonomic characteristics indicated that the strain BA0156 T represents a new species for which the name Hydrogenophaga crocea (type strain BA0156 T = MCC 3062 T = KCTC 72452 T = JCM 34507 T ) is proposed.
Bibliography:	ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23
ISSN:	0302-8933 1432-072X
DOI:	10.1007/s00203-022-02865-2