Search Results - "Charloteaux, Benoît"

Detection and identification of transgenic events by next generation sequencing combined with enrichment technologies by Debode, Frédéric, Hulin, Julie, Charloteaux, Benoît, Coppieters, Wouter, Hanikenne, Marc, Karim, Latifa, Berben, Gilbert

“…Next generation sequencing (NGS) is a promising tool for analysing the quality and safety of food and feed products. The detection and identification of…”
Get full text

Protein-Nucleic Acid Recognition: Statistical Analysis Of Atomic Interactions And Influence Of Dna Structure by Lejeune, D, Delsaux, N, Charloteaux, Benoît, Thomas, Annick, Brasseur, Robert

“…We analyzed structural features of 11,038 direct atomic contacts (either electrostatic, H‐bonds, hydrophobic, or other van der Waals interactions) extracted…”
Get full text

A fast method to predict protein interaction sites from sequences by Gallet, Xavier, Charloteaux, Benoit, Thomas, Annick, Brasseur, Robert

“…A simple method for predicting residues involved in protein interaction sites is proposed. In the absence of any structural report, the procedure identifies…”
Get full text

Prediction of peptide structure: How far are we? by Thomas, Annick, Deshayes, Sébastien, Decaffmeyer, Marc, Van Eyck, Marie Hélène, Charloteaux, Benoit, Brasseur, Robert

“…Rational design of peptides is a challenge, which would benefit from a better knowledge of the rules of sequence–structure–function relationships. Peptide…”
Get full text

Aromatic side-chain interactions in proteins. I. Main structural features by Thomas, Annick, Meurisse, Rita, Charloteaux, Benoit, Brasseur, Robert

“…In a data set of 593 nonhomologous proteins from the PDB, we have analyzed the pairing of phenylalanine, tyrosine, tryptophan, and histidine residues with…”
Get full text

Codon-specific translation reprogramming promotes resistance to targeted therapy by Rapino, Francesca, Delaunay, Sylvain, Rambow, Florian, Zhou, Zhaoli, Tharun, Lars, De Tullio, Pascal, Sin, Olga, Shostak, Kateryna, Schmitz, Sebastian, Piepers, Jolanda, Ghesquière, Bart, Karim, Latifa, Charloteaux, Benoit, Jamart, Diane, Florin, Alexandra, Lambert, Charles, Rorive, Andrée, Jerusalem, Guy, Leucci, Eleonora, Dewaele, Michael, Vooijs, Marc, Leidel, Sebastian A., Georges, Michel, Voz, Marianne, Peers, Bernard, Büttner, Reinhard, Marine, Jean-Christophe, Chariot, Alain, Close, Pierre

“…Reprogramming of mRNA translation has a key role in cancer development and drug resistance 1 . However, the molecular mechanisms that are involved in this…”
Get full text

A reference map of the human binary protein interactome by Luck, Katja, Kim, Dae-Kyum, Lambourne, Luke, Spirohn, Kerstin, Begg, Bridget E., Bian, Wenting, Brignall, Ruth, Cafarelli, Tiziana, Campos-Laborie, Francisco J., Charloteaux, Benoit, Choi, Dongsic, Coté, Atina G., Daley, Meaghan, Deimling, Steven, Desbuleux, Alice, Dricot, Amélie, Gebbia, Marinella, Hardy, Madeleine F., Kishore, Nishka, Knapp, Jennifer J., Kovács, István A., Lemmens, Irma, Mee, Miles W., Mellor, Joseph C., Pollis, Carl, Pons, Carles, Richardson, Aaron D., Schlabach, Sadie, Teeking, Bridget, Yadav, Anupama, Babor, Mariana, Balcha, Dawit, Basha, Omer, Bowman-Colin, Christian, Chin, Suet-Feung, Choi, Soon Gang, Colabella, Claudia, Coppin, Georges, D’Amata, Cassandra, De Ridder, David, De Rouck, Steffi, Duran-Frigola, Miquel, Ennajdaoui, Hanane, Goebels, Florian, Goehring, Liana, Gopal, Anjali, Haddad, Ghazal, Hatchi, Elodie, Helmy, Mohamed, Jacob, Yves, Kassa, Yoseph, Landini, Serena, Li, Roujia, van Lieshout, Natascha, MacWilliams, Andrew, Markey, Dylan, Paulson, Joseph N., Rangarajan, Sudharshan, Rasla, John, Rayhan, Ashyad, Rolland, Thomas, San-Miguel, Adriana, Shen, Yun, Sheykhkarimli, Dayag, Sheynkman, Gloria M., Simonovsky, Eyal, Taşan, Murat, Tejeda, Alexander, Tropepe, Vincent, Twizere, Jean-Claude, Wang, Yang, Weatheritt, Robert J., Weile, Jochen, Xia, Yu, Yang, Xinping, Yeger-Lotem, Esti, Zhong, Quan, Aloy, Patrick, Bader, Gary D., De Las Rivas, Javier, Gaudet, Suzanne, Hao, Tong, Rak, Janusz, Tavernier, Jan, Hill, David E., Vidal, Marc, Roth, Frederick P., Calderwood, Michael A.

“…Global insights into cellular organization and genome function require comprehensive understanding of the interactome networks that mediate genotype–phenotype…”
Get full text

Mode of Membrane Interaction and Fusogenic Properties of a de Novo Transmembrane Model Peptide Depend on the Length of the Hydrophobic Core by Lorin, Aurélien, Charloteaux, Benoit, Fridmann-Sirkis, Yael, Thomas, Annick, Shai, Yechiel, Brasseur, Robert

“…Model peptides composed of alanine and leucine residues are often used to mimic single helical transmembrane domains. Many studies have been carried out to…”
Get full text

In Silico tilted properties of the 67-78 fragment of alpha-synuclein are responsible for membrane destabilization and neurotoxicity by Crowet, Jean-Marc, Lins, Laurence, Dupiereux-Fettweis, Ingrid, Elmoualij, Benaïssa, Lorin, Aurélien, Charloteaux, Benoît, Stroobant, Vincent, Heinen, Ernst, Brasseur, Robert

“…Alpha-synuclein is a 140 residue protein associated with Parkinson's disease. Intraneural inclusions called Lewy bodies and Lewy neurites are mainly composed…”
Get full text

A Proteome-Scale Map of the Human Interactome Network by Rolland, Thomas, Taşan, Murat, Charloteaux, Benoit, Pevzner, Samuel J., Zhong, Quan, Sahni, Nidhi, Yi, Song, Lemmens, Irma, Fontanillo, Celia, Mosca, Roberto, Kamburov, Atanas, Ghiassian, Susan D., Yang, Xinping, Ghamsari, Lila, Balcha, Dawit, Begg, Bridget E., Braun, Pascal, Brehme, Marc, Broly, Martin P., Carvunis, Anne-Ruxandra, Convery-Zupan, Dan, Corominas, Roser, Coulombe-Huntington, Jasmin, Dann, Elizabeth, Dreze, Matija, Dricot, Amélie, Fan, Changyu, Franzosa, Eric, Gebreab, Fana, Gutierrez, Bryan J., Hardy, Madeleine F., Jin, Mike, Kang, Shuli, Kiros, Ruth, Lin, Guan Ning, Luck, Katja, MacWilliams, Andrew, Menche, Jörg, Murray, Ryan R., Palagi, Alexandre, Poulin, Matthew M., Rambout, Xavier, Rasla, John, Reichert, Patrick, Romero, Viviana, Ruyssinck, Elien, Sahalie, Julie M., Scholz, Annemarie, Shah, Akash A., Sharma, Amitabh, Shen, Yun, Spirohn, Kerstin, Tam, Stanley, Tejeda, Alexander O., Wanamaker, Shelly A., Twizere, Jean-Claude, Vega, Kerwin, Walsh, Jennifer, Cusick, Michael E., Xia, Yu, Barabási, Albert-László, Iakoucheva, Lilia M., Aloy, Patrick, De Las Rivas, Javier, Tavernier, Jan, Calderwood, Michael A., Hill, David E., Hao, Tong, Roth, Frederick P., Vidal, Marc

“…Just as reference genome sequences revolutionized human genetics, reference maps of interactome networks will be critical to fully understand…”
Get full text

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing by Yang, Xinping, Coulombe-Huntington, Jasmin, Kang, Shuli, Sheynkman, Gloria M., Hao, Tong, Richardson, Aaron, Sun, Song, Yang, Fan, Shen, Yun A., Murray, Ryan R., Spirohn, Kerstin, Begg, Bridget E., Duran-Frigola, Miquel, MacWilliams, Andrew, Pevzner, Samuel J., Zhong, Quan, Wanamaker, Shelly A., Tam, Stanley, Ghamsari, Lila, Sahni, Nidhi, Yi, Song, Rodriguez, Maria D., Balcha, Dawit, Tan, Guihong, Costanzo, Michael, Andrews, Brenda, Boone, Charles, Zhou, Xianghong J., Salehi-Ashtiani, Kourosh, Charloteaux, Benoit, Chen, Alyce A., Calderwood, Michael A., Aloy, Patrick, Roth, Frederick P., Hill, David E., Iakoucheva, Lilia M., Xia, Yu, Vidal, Marc

“…While alternative splicing is known to diversify the functional characteristics of some genes, the extent to which protein isoforms globally contribute to…”
Get full text

Single-cell RNA sequencing of human liver reveals hepatic stellate cell heterogeneity by Payen, Valéry L., Lavergne, Arnaud, Alevra Sarika, Niki, Colonval, Megan, Karim, Latifa, Deckers, Manon, Najimi, Mustapha, Coppieters, Wouter, Charloteaux, Benoît, Sokal, Etienne M., El Taghdouini, Adil

“…The multiple vital functions of the human liver are performed by highly specialised parenchymal and non-parenchymal cells organised in complex collaborative…”
Get full text

The X-linked trichothiodystrophy-causing gene RNF113A links the spliceosome to cell survival upon DNA damage by Shostak, Kateryna, Jiang, Zheshen, Charloteaux, Benoit, Mayer, Alice, Habraken, Yvette, Tharun, Lars, Klein, Sebastian, Xu, Xinyi, Duong, Hong Quan, Vislovukh, Andrii, Close, Pierre, Florin, Alexandra, Rambow, Florian, Marine, Jean-Christophe, Büttner, Reinhard, Chariot, Alain

“…Prolonged cell survival occurs through the expression of specific protein isoforms generated by alternate splicing of mRNA precursors in cancer cells. How…”
Get full text

Determination of the minimal fusion peptide of bovine leukemia virus gp30 by Lorin, Aurélien, Lins, Laurence, Stroobant, Vincent, Brasseur, Robert, Charloteaux, Benoit

“…In this study, we determined the minimal N-terminal fusion peptide of the gp30 of the bovine leukemia virus on the basis of the tilted peptide theory. We first…”
Get full text

IBD risk loci are enriched in multigenic regulatory modules encompassing putative causative genes by Momozawa, Yukihide, Dmitrieva, Julia, Théâtre, Emilie, Deffontaine, Valérie, Rahmouni, Souad, Charloteaux, Benoît, Crins, François, Docampo, Elisa, Elansary, Mahmoud, Gori, Ann-Stephan, Lecut, Christelle, Mariman, Rob, Mni, Myriam, Oury, Cécile, Altukhov, Ilya, Alexeev, Dmitry, Aulchenko, Yuri, Amininejad, Leila, Bouma, Gerd, Hoentjen, Frank, Löwenberg, Mark, Oldenburg, Bas, Pierik, Marieke J., vander Meulen-de Jong, Andrea E., Janneke van der Woude, C., Visschedijk, Marijn C., Lathrop, Mark, Hugot, Jean-Pierre, Weersma, Rinse K., De Vos, Martine, Franchimont, Denis, Vermeire, Severine, Kubo, Michiaki, Louis, Edouard, Georges, Michel

“…GWAS have identified >200 risk loci for Inflammatory Bowel Disease (IBD). The majority of disease associations are known to be driven by regulatory variants…”
Get full text

Determination of the minimal fusion peptide of HIV, SIV and BLV fusion glycoproteins by Lorin, Aurélien, Charloteaux, Benoît, Lins, Laurence, Stroobant, Vincent, Brasseur, Robert

Get more information

Edgetic perturbation models of human inherited disorders by Hill, David E, Klitgord, Niels, Yan, Han, Cusick, Michael E, Heuze, Fabien, Lin, Chenwei, Vidal, Marc, Venkatesan, Kavitha, Zhong, Quan, Mou, Danny, Simonis, Nicolas, Swearingen, Venus, Yildirim, Muhammed A, Szeto, David, Fan, Changyu, Li, Qian-Ru, Yu, Haiyuan, Dricot, Amélie, Brasseur, Robert, Hao, Tong, Charloteaux, Benoit, Dupuy, Denis, Milstein, Stuart, Tam, Stanley

“…Cellular functions are mediated through complex systems of macromolecules and metabolites linked through biochemical and physical interactions, represented in…”
Get full text

Distantly related lipocalins share two conserved clusters of hydrophobic residues: use in homology modeling by Adam, Benoit, Charloteaux, Benoit, Beaufays, Jerome, Vanhamme, Luc, Godfroid, Edmond, Brasseur, Robert, Lins, Laurence

“…Lipocalins are widely distributed in nature and are found in bacteria, plants, arthropoda and vertebra. In hematophagous arthropods, they are implicated in the…”
Get full text

Methylglyoxal, a glycolysis metabolite, triggers metastasis through MEK/ERK/SMAD1 pathway activation in breast cancer by Nokin, Marie-Julie, Bellier, Justine, Durieux, Florence, Peulen, Olivier, Rademaker, Gilles, Gabriel, Maude, Monseur, Christine, Charloteaux, Benoit, Verbeke, Lieven, van Laere, Steven, Roncarati, Patrick, Herfs, Michael, Lambert, Charles, Scheijen, Jean, Schalkwijk, Casper, Colige, Alain, Caers, Jo, Delvenne, Philippe, Turtoi, Andrei, Castronovo, Vincent, Bellahcène, Akeila

“…Elevated aerobic glycolysis rate is a biochemical alteration associated with malignant transformation and cancer progression. This metabolic shift unavoidably…”
Get full text

Analysis of the C-Terminal Membrane Anchor Domains of Hepatitis C Virus Glycoproteins E1 and E2: toward a Topological Model by Charloteaux, Benoit, Lins, Laurence, Moereels, Henri, Brasseur, Robert

“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
Get full text