Search Results - "Carrére, Sébastien"

The xylan utilization system of the plant pathogen Xanthomonas campestris pv campestris controls epiphytic life and reveals common features with oligotrophic bacteria and animal gut symbionts by Déjean, Guillaume, Blanvillain‐Baufumé, Servane, Boulanger, Alice, Darrasse, Armelle, Bernonville, Thomas Dugé, Girard, Anne‐Laure, Carrére, Sébastien, Jamet, Stevie, Zischek, Claudine, Lautier, Martine, Solé, Magali, Büttner, Daniela, Jacques, Marie‐Agnès, Lauber, Emmanuelle, Arlat, Matthieu

“…Xylan is a major structural component of plant cell wall and the second most abundant plant polysaccharide in nature. Here, by combining genomic and functional…”
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integrated analysis of plant and bacterial gene expression in symbiotic root nodules using laser‐capture microdissection coupled to RNA sequencing by Roux, Brice, Rodde, Nathalie, Jardinaud, Marie‐Françoise, Timmers, Ton, Sauviac, Laurent, Cottret, Ludovic, Carrère, Sébastien, Sallet, Erika, Courcelle, Emmanuel, Moreau, Sandra, Debellé, Frédéric, Capela, Delphine, Carvalho‐Niebel, Fernanda, Gouzy, Jérôme, Bruand, Claude, Gamas, Pascal

“…Rhizobium‐induced root nodules are specialized organs for symbiotic nitrogen fixation. Indeterminate‐type nodules are formed from an apical meristem and…”
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The Rosa genome provides new insights into the domestication of modern roses by Raymond, Olivier, Gouzy, Jérôme, Just, Jérémy, Badouin, Hélène, Verdenaud, Marion, Lemainque, Arnaud, Vergne, Philippe, Moja, Sandrine, Choisne, Nathalie, Pont, Caroline, Carrère, Sébastien, Caissard, Jean-Claude, Couloux, Arnaud, Cottret, Ludovic, Aury, Jean-Marc, Szécsi, Judit, Latrasse, David, Madoui, Mohammed-Amin, François, Léa, Fu, Xiaopeng, Yang, Shu-Hua, Dubois, Annick, Piola, Florence, Larrieu, Antoine, Perez, Magali, Labadie, Karine, Perrier, Lauriane, Govetto, Benjamin, Labrousse, Yoan, Villand, Priscilla, Bardoux, Claudia, Boltz, Véronique, Lopez-Roques, Céline, Heitzler, Pascal, Vernoux, Teva, Vandenbussche, Michiel, Quesneville, Hadi, Boualem, Adnane, Bendahmane, Abdelhafid, Liu, Chang, Le Bris, Manuel, Salse, Jérôme, Baudino, Sylvie, Benhamed, Moussa, Wincker, Patrick, Bendahmane, Mohammed

“…Roses have high cultural and economic importance as ornamental plants and in the perfume industry. We report the rose whole-genome sequencing and assembly and…”
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Repertoire, unified nomenclature and evolution of the Type III effector gene set in the Ralstonia solanacearum species complex by Peeters, Nemo, Carrère, Sébastien, Anisimova, Maria, Plener, Laure, Cazalé, Anne-Claire, Genin, Stephane

“…Ralstonia solanacearum is a soil-borne beta-proteobacterium that causes bacterial wilt disease in many food crops and is a major problem for agriculture in…”
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Full‐length de novo assembly of RNA‐seq data in pea (Pisum sativum L.) provides a gene expression atlas and gives insights into root nodulation in this species by Alves‐Carvalho, Susete, Aubert, Grégoire, Carrère, Sébastien, Cruaud, Corinne, Brochot, Anne‐Lise, Jacquin, Françoise, Klein, Anthony, Martin, Chantal, Boucherot, Karen, Kreplak, Jonathan, Silva, Corinne, Moreau, Sandra, Gamas, Pascal, Wincker, Patrick, Gouzy, Jérôme, Burstin, Judith

“…Summary Next‐generation sequencing technologies allow an almost exhaustive survey of the transcriptome, even in species with no available genome sequence. To…”
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RNA-Seq analysis of rye-grass transcriptomic response to an herbicide inhibiting acetolactate-synthase identifies transcripts linked to non-target-site-based resistance by Duhoux, Arnaud, Carrère, Sébastien, Gouzy, Jérôme, Bonin, Ludovic, Délye, Christophe

“…Non-target-site resistance (NTSR) to herbicides that disrupts agricultural weed control is a worldwide concern for food security. NTSR is considered a…”
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Toward a comprehensive study for multielemental quantitative LA-ICP MS bioimaging in soft tissues by Arnaudguilhem, Carine, Larroque, Marion, Sgarbura, Olivia, Michau, Dominique, Quenet, François, Carrère, Sébastien, Bouyssière, Brice, Mounicou, Sandra

“…Quantitative localization of metals in biological tissue sections is critical to obtain insight into metal toxicity mechanisms or their beneficial…”
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High-quality genome sequence of white lupin provides insight into soil exploration and seed quality by Hufnagel, Bárbara, Marques, André, Soriano, Alexandre, Marquès, Laurence, Divol, Fanchon, Doumas, Patrick, Sallet, Erika, Mancinotti, Davide, Carrere, Sébastien, Marande, William, Arribat, Sandrine, Keller, Jean, Huneau, Cécile, Blein, Thomas, Aimé, Delphine, Laguerre, Malika, Taylor, Jemma, Schubert, Veit, Nelson, Matthew, Geu-Flores, Fernando, Crespi, Martin, Gallardo, Karine, Delaux, Pierre-Marc, Salse, Jérôme, Bergès, Hélène, Guyot, Romain, Gouzy, Jérôme, Péret, Benjamin

“…White lupin ( Lupinus albus L .) is an annual crop cultivated for its protein-rich seeds. It is adapted to poor soils due to the production of cluster roots,…”
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EffectorK, a comprehensive resource to mine for Ralstonia, Xanthomonas, and other published effector interactors in the Arabidopsis proteome by González‐Fuente, Manuel, Carrère, Sébastien, Monachello, Dario, Marsella, Benjamin G., Cazalé, Anne‐Claire, Zischek, Claudine, Mitra, Raka M., Rezé, Nathalie, Cottret, Ludovic, Mukhtar, M. Shahid, Lurin, Claire, Noël, Laurent D., Peeters, Nemo

“…Pathogens deploy effector proteins that interact with host proteins to manipulate the host physiology to the pathogen's own benefit. However, effectors can…”
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Comparative transcriptomics reveals a highly polymorphic Xanthomonas HrpG virulence regulon by Monnens, Thomas Quiroz, Roux, Brice, Cunnac, Sébastien, Charbit, Erika, Carrère, Sébastien, Lauber, Emmanuelle, Jardinaud, Marie-Françoise, Darrasse, Armelle, Arlat, Matthieu, Szurek, Boris, Pruvost, Olivier, Jacques, Marie-Agnès, Gagnevin, Lionel, Koebnik, Ralf, Noël, Laurent D, Boulanger, Alice

“…Bacteria of the genus Xanthomonas cause economically significant diseases in various crops. Their virulence is dependent on the translocation of type III…”
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Combined genetic and transcriptomic analysis reveals three major signalling pathways activated by Myc-LCOs in Medicago truncatula by Camps, Céline, Jardinaud, Marie‐Françoise, Rengel, David, Carrère, Sébastien, Hervé, Christine, Debellé, Frédéric, Gamas, Pascal, Bensmihen, Sandra, Gough, Clare

“…Myc-LCOs are newly identified symbiotic signals produced by arbuscular mycorrhizal (AM) fungi. Like rhizobial Nod factors, they are lipo-chitooligosaccharides…”
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A high diversity of non-target site resistance mechanisms to acetolactate-synthase (ALS) inhibiting herbicides has evolved within and among field populations of common ragweed (Ambrosia artemisiifolia L.) by Loubet, Ingvild, Meyer, Lucie, Michel, Séverine, Pernin, Fanny, Carrère, Sébastien, Barrès, Benoit, Le Corre, Valérie, Délye, Christophe

“…BackgroundNon-target site resistance (NTSR) to herbicides is a polygenic trait that threatens the chemical control of agricultural weeds. NTSR involves…”
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Common bean resistance to Xanthomonas is associated with upregulation of the salicylic acid pathway and downregulation of photosynthesis by Foucher, Justine, Ruh, Mylène, Préveaux, Anne, Carrère, Sébastien, Pelletier, Sandra, Briand, Martial, Serre, Rémy-Félix, Jacques, Marie-Agnès, Chen, Nicolas W G

“…Common bacterial blight (CBB) caused by Xanthomonas phaseoli pv. phaseoli and Xanthomonas citri pv. fuscans is one of the major threats to common bean crops…”
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Genetic control of plasticity of oil yield for combined abiotic stresses using a joint approach of crop modelling and genome‐wide association by Mangin, Brigitte, Casadebaig, Pierre, Cadic, Eléna, Blanchet, Nicolas, Boniface, Marie‐Claude, Carrère, Sébastien, Gouzy, Jérôme, Legrand, Ludovic, Mayjonade, Baptiste, Pouilly, Nicolas, André, Thierry, Coque, Marie, Piquemal, Joël, Laporte, Marion, Vincourt, Patrick, Muños, Stéphane, Langlade, Nicolas B.

“…Understanding the genetic basis of phenotypic plasticity is crucial for predicting and managing climate change effects on wild plants and crops. Here, we…”
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Population genomics of apricots unravels domestication history and adaptive events by Groppi, Alexis, Liu, Shuo, Cornille, Amandine, Decroocq, Stéphane, Bui, Quynh Trang, Tricon, David, Cruaud, Corinne, Arribat, Sandrine, Belser, Caroline, Marande, William, Salse, Jérôme, Huneau, Cécile, Rodde, Nathalie, Rhalloussi, Wassim, Cauet, Stéphane, Istace, Benjamin, Denis, Erwan, Carrère, Sébastien, Audergon, Jean-Marc, Roch, Guillaume, Lambert, Patrick, Zhebentyayeva, Tetyana, Liu, Wei-Sheng, Bouchez, Olivier, Lopez-Roques, Céline, Serre, Rémy-Félix, Debuchy, Robert, Tran, Joseph, Wincker, Patrick, Chen, Xilong, Pétriacq, Pierre, Barre, Aurélien, Nikolski, Macha, Aury, Jean-Marc, Abbott, Albert Glenn, Giraud, Tatiana, Decroocq, Véronique

“…Among crop fruit trees, the apricot ( Prunus armeniaca ) provides an excellent model to study divergence and adaptation processes. Here, we obtain nearly 600…”
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ALOMYbase, a resource to investigate non-target-site-based resistance to herbicides inhibiting acetolactate-synthase (ALS) in the major grass weed Alopecurus myosuroides (black-grass) by Gardin, Jeanne Aude Christiane, Gouzy, Jérôme, Carrère, Sébastien, Délye, Christophe

“…Herbicide resistance in agrestal weeds is a global problem threatening food security. Non-target-site resistance (NTSR) endowed by mechanisms neutralising the…”
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Transcriptional markers enable identification of rye-grass (Lolium sp.) plants with non-target-site-based resistance to herbicides inhibiting acetolactate-synthase by Duhoux, Arnaud, Carrère, Sébastien, Duhoux, Alexis, Délye, Christophe

“…•Transcriptional markers for non-target herbicide resistance were sought via RNA-Seq.•Expression of 19 markers was significantly higher in resistant rye-grass…”
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In situ relationships between microbiota and potential pathobiota in Arabidopsis thaliana by Bartoli, Claudia, Frachon, Léa, Barret, Matthieu, Rigal, Mylène, Huard-Chauveau, Carine, Mayjonade, Baptiste, Zanchetta, Catherine, Bouchez, Olivier, Roby, Dominique, Carrère, Sébastien, Roux, Fabrice

“…A current challenge in microbial pathogenesis is to identify biological control agents that may prevent and/or limit host invasion by microbial pathogens. In…”
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NBTXR3, a first-in-class radioenhancer hafnium oxide nanoparticle, plus radiotherapy versus radiotherapy alone in patients with locally advanced soft-tissue sarcoma (Act.In.Sarc): a multicentre, phase 2–3, randomised, controlled trial by Bonvalot, Sylvie, PhD, Rutkowski, Piotr L, Prof, Thariat, Juliette, Prof, Carrère, Sébastien, MD, Ducassou, Anne, MD, Sunyach, Marie-Pierre, MD, Agoston, Peter, MD, Hong, Angela, MBBS, Mervoyer, Augustin, MD, Rastrelli, Marco, MD, Moreno, Victor, MD, Li, Rubi K, MD, Tiangco, Béatrice, MD, Herraez, Antonio Casado, MD, Gronchi, Alessandro, MD, Mangel, László, MD, Sy-Ortin, Teresa, MD, Hohenberger, Peter, Prof, de Baère, Thierry, Prof, Le Cesne, Axel, MD, Helfre, Sylvie, MD, Saada-Bouzid, Esma, MD, Borkowska, Aneta, MD, Anghel, Rodica, MD, Co, Ann, MD, Gebhart, Michael, Prof, Kantor, Guy, Prof, Montero, Angel, MD, Loong, Herbert H, MD, Vergés, Ramona, MD, Lapeire, Lore, MD, Dema, Sorin, MD, Kacso, Gabriel, MD, Austen, Lyn, MD, Moureau-Zabotto, Laurence, MD, Servois, Vincent, MD, Wardelmann, Eva, Prof, Terrier, Philippe, MD, Lazar, Alexander J, MD, Bovée, Judith V M G, Prof, Le Péchoux, Cécile, MD, Papai, Zsusanna, Prof

“…SummaryBackgroundPathological complete response to preoperative treatment in adults with soft-tissue sarcoma can be achieved in only a few patients receiving…”
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A Genomic Map of Climate Adaptation in Arabidopsis thaliana at a Micro-Geographic Scale by Frachon, Léa, Bartoli, Claudia, Carrère, Sébastien, Bouchez, Olivier, Chaubet, Adeline, Gautier, Mathieu, Roby, Dominique, Roux, Fabrice

“…Understanding the genetic bases underlying climate adaptation is a key element to predict the potential of species to face climate warming. Although…”
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