Search Results - "Cardoso, Joao R."

Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories by Cardoso, João G. R, Jensen, Kristian, Lieven, Christian, Lærke Hansen, Anne Sofie, Galkina, Svetlana, Beber, Moritz, Özdemir, Emre, Herrgård, Markus J, Redestig, Henning, Sonnenschein, Nikolaus

“…Computational systems biology methods enable rational design of cell factories on a genome-scale and thus accelerate the engineering of cells for the…”
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Evolution of the angiopoietin-like gene family in teleosts and their role in skin regeneration by Costa, Rita A, Cardoso, João C R, Power, Deborah M

“…The skin in vertebrates is a protective barrier and damage is rapidly repaired to re-establish barrier function and maintain internal homeostasis. The…”
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Unravelling the Evolution of the Allatostatin-Type A, KISS and Galanin Peptide-Receptor Gene Families in Bilaterians: Insights from Anopheles Mosquitoes by Felix, Rute C, Trindade, Marlene, Pires, Isa R P, Fonseca, Vera G, Martins, Rute S, Silveira, Henrique, Power, Deborah M, Cardoso, João C R

“…Allatostatin type A receptors (AST-ARs) are a group of G-protein coupled receptors activated by members of the FGL-amide (AST-A) peptide family that inhibit…”
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Analysis of Pseudomonas putida growth on non‐trivial carbon sources using transcriptomics and genome‐scale modelling by D'Arrigo, Isotta, Cardoso, João G. R., Rennig, Maja, Sonnenschein, Nikolaus, Herrgård, Markus J., Long, Katherine S.

“…Summary Pseudomonas putida is characterized by a versatile metabolism and stress tolerance traits that allow the bacterium to cope with different environmental…”
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Toll-Like Receptor Evolution: Does Temperature Matter? by Sousa, Cármen, Fernandes, Stefan A, Cardoso, João C R, Wang, Ying, Zhai, Wanying, Guerreiro, Pedro M, Chen, Liangbiao, Canário, Adelino V M, Power, Deborah M

“…Toll-like receptors (TLRs) recognize conserved pathogen-associated molecular patterns (PAMPs) and are an ancient and well-conserved group of pattern…”
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Laser spectroscopy of muonic deuterium by Pohl, Randolf, Nez, François, Fernandes, Luis M. P., Amaro, Fernando D., Biraben, François, Cardoso, João M. R., Covita, Daniel S., Dax, Andreas, Dhawan, Satish, Diepold, Marc, Giesen, Adolf, Gouvea, Andrea L., Graf, Thomas, Hänsch, Theodor W., Indelicato, Paul, Julien, Lucile, Knowles, Paul, Kottmann, Franz, Le Bigot, Eric-Olivier, Liu, Yi-Wei, Lopes, José A. M., Ludhova, Livia, Monteiro, Cristina M. B., Mulhauser, Françoise, Nebel, Tobias, Rabinowitz, Paul, dos Santos, Joaquim M. F., Schaller, Lukas A., Schuhmann, Karsten, Schwob, Catherine, Taqqu, David, Veloso, João F. C. A., Antognini, Aldo

“…The deuteron is the simplest compound nucleus, composed of one proton and one neutron. Deuteron properties such as the root-mean-square charge radius rd and…”
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Computation of matrix gamma function by Cardoso, João R., Sadeghi, Amir

“…Matrix functions have a major role in science and engineering. One of the fundamental matrix functions, which is particularly important due to its connections…”
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Proton Structure from the Measurement of 2S-2P Transition Frequencies of Muonic Hydrogen by Antognini, Aldo, Nez, François, Schuhmann, Karsten, Amaro, Fernando D., Biraben, François, Cardoso, João M. R., Covita, Daniel S., Dax, Andreas, Dhawan, Satish, Diepold, Marc, Fernandes, Luis M. P., Giesen, Adolf, Gouvea, Andrea L., Graf, Thomas, Hänsch, Theodor W., Indelicato, Paul, Julien, Lucile, Kao, Cheng-Yang, Knowles, Paul, Kottmann, Franz, Le Bigot, Eric-Olivier, Liu, Yi-Wei, Lopes, José A. M., Ludhova, Livia, Monteiro, Cristina M. B., Mulhauser, Françoise, Nebel, Tobias, Rabinowitz, Paul, dos Santos, Joaquim M. F., Schaller, Lukas A., Schwob, Catherine, Taqqu, David, Veloso, João F. C. A., Vogelsang, Jan, Pohl, Randolf

“…Accurate knowledge of the charge and Zemach radii of the proton is essential, not only for understanding its structure but also as input for tests of…”
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Explicit Solutions of the Singular Yang–Baxter-like Matrix Equation and Their Numerical Computation by Kumar, Ashim, Cardoso, João R., Singh, Gurjinder

“…We derive several explicit formulae for finding infinitely many solutions of the equation A X A = X A X , when A is singular. We start by splitting the…”
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New insights into the evolution of vertebrate CRH (corticotropin-releasing hormone) and invertebrate DH44 (diuretic hormone 44) receptors in metazoans by Cardoso, João C.R, Félix, Rute C, Bergqvist, Christina A, Larhammar, Dan

“…Highlights • The CRHR/DH44R ancestor arose in metazoans before the divergence of protostomes and deuterostomes. • In protostomes this receptor evolved to…”
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On the Generalized Essential Matrix Correction: An Efficient Solution to the Problem and Its Applications by Miraldo, Pedro, Cardoso, João R.

“…This paper addresses the problem of finding the closest generalized essential matrix from a given 6 × 6 matrix, with respect to the Frobenius norm. To the best…”
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Specific Evolution and Gene Family Expansion of Complement 3 and Regulatory Factor H in Fish by Najafpour, Babak, Cardoso, João C R, Canário, Adelino V M, Power, Deborah M

“…The complement system comprises a large family of plasma proteins that play a central role in innate and adaptive immunity. To better understand the evolution…”
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Corticotropin-Releasing Hormone (CRH) Gene Family Duplications in Lampreys Correlate With Two Early Vertebrate Genome Doublings by Cardoso, João C. R., Bergqvist, Christina A., Larhammar, Dan

“…The ancestor of gnathostomes (jawed vertebrates) is generally considered to have undergone two rounds of whole genome duplication (WGD). The timing of these…”
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Chronic stress impairs the local immune response during cutaneous repair in gilthead sea bream (Sparus aurata, L.) by Mateus, Ana Patrícia, Anjos, Liliana, Cardoso, João R, Power, Deborah M

“…Scale removal in fish triggers a damage-repair program to re-establish the lost epidermis and scale and an associated local immune response. In mammals,…”
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Conditioning of the matrix-matrix exponentiation by Cardoso, João R., Sadeghi, Amir

“…If A has no eigenvalues on the closed negative real axis, and B is arbitrary square complex, the matrix-matrix exponentiation is defined as A B := e log( A ) B…”
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Tracing the Origins of the Pituitary Adenylate-Cyclase Activating Polypeptide (PACAP) by Cardoso, João C. R., Garcia, Manuel G., Power, Deborah M.

“…Pituitary Adenylate Cyclase activating Peptide (PACAP) is a well-conserved neuropeptide characteristic of vertebrates. This pluripotent hypothalamic…”
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Domain-Dependent Evolution Explains Functional Homology of Protostome and Deuterostome Complement C3-Like Proteins by Peng, Maoxiao, Li, Zhi, Cardoso, João C R, Niu, Donghong, Liu, Xiaojun, Dong, Zhiguo, Li, Jiale, Power, Deborah M

“…Complement proteins emerged early in evolution but outside the vertebrate clade they are poorly characterized. An evolutionary model of C3 family members…”
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Corticotropin-releasing hormone family evolution: five ancestral genes remain in some lineages by Cardoso, João C R, Bergqvist, Christina A, Félix, Rute C, Larhammar, Dan

“…The evolution of the peptide family consisting of corticotropin-releasing hormone (CRH) and the three urocortins (UCN1-3) has been puzzling due to uneven…”
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Nematode and arthropod genomes provide new insights into the evolution of class 2 B1 GPCRs by Cardoso, João C R, Félix, Rute C, Power, Deborah M

“…Nematodes and arthropods are the most speciose animal groups and possess Class 2 B1 G-protein coupled receptors (GPCRs). Existing models of invertebrate Class…”
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Evolution and Potential Function in Molluscs of Neuropeptide and Receptor Homologues of the Insect Allatostatins by Li, Zhi, Cardoso, João C R, Peng, Maoxiao, Inácio, João P S, Power, Deborah M

“…The allatostatins (ASTs), AST-A, AST-B and AST-C, have mainly been investigated in insects. They are a large group of small pleotropic alloregulatory…”
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