Search Results - "Capriotti, E."

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  1. 1

    I-Mutant2.0: predicting stability changes upon mutation from the protein sequence or structure by Capriotti, Emidio, Fariselli, Piero, Casadio, Rita

    Published in Nucleic acids research (01-07-2005)
    “…I-Mutant2.0 is a support vector machine (SVM)-based tool for the automatic prediction of protein stability changes upon single point mutations. I-Mutant2.0…”
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    Journal Article
  2. 2

    Predicting the insurgence of human genetic diseases associated to single point protein mutations with support vector machines and evolutionary information by Capriotti, E., Calabrese, R., Casadio, R.

    Published in Bioinformatics (15-11-2006)
    “…Motivation: Human single nucleotide polymorphisms (SNPs) are the most frequent type of genetic variation in human population. One of the most important goals…”
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    Journal Article
  3. 3

    K-Fold: a tool for the prediction of the protein folding kinetic order and rate by Capriotti, E., Casadio, R.

    Published in Bioinformatics (01-02-2007)
    “…K-Fold is a tool for the automatic prediction of the protein folding kinetic order and rate. The tool is based on a support vector machine (SVM) that was…”
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    Journal Article
  4. 4

    The Origin and Physical Properties of the Cometary Knots in NGC 7293 by Capriotti, Eugene R, Kendall, Anthony D

    Published in The Astrophysical journal (10-05-2006)
    “…On the basis that the cometary knots observed in the Helix Nebula form as a result of larger "parent clouds" breaking up due to Rayleigh-Taylor instability…”
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    Journal Article
  5. 5

    Predicting protein stability changes from sequences using support vector machines by Capriotti, Emidio, Fariselli, Piero, Calabrese, Remo, Casadio, Rita

    Published in Bioinformatics (01-09-2005)
    “…Motivation: The prediction of protein stability change upon mutations is key to understanding protein folding and misfolding. At present, methods are available…”
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  6. 6

    Bioinformatics for personal genome interpretation by Capriotti, Emidio, Nehrt, Nathan L, Kann, Maricel G, Bromberg, Yana

    Published in Briefings in bioinformatics (01-07-2012)
    “…An international consortium released the first draft sequence of the human genome 10 years ago. Although the analysis of this data has suggested the genetic…”
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  7. 7

    A neural-network-based method for predicting protein stability changes upon single point mutations by Capriotti, Emidio, Fariselli, Piero, Casadio, Rita

    Published in Bioinformatics (04-08-2004)
    “…Motivation: One important requirement for protein design is to be able to predict changes of protein stability upon mutation. Different methods addressing this…”
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    Journal Article
  8. 8

    SARA: a server for function annotation of RNA structures by Capriotti, Emidio, Marti-Renom, Marc A

    Published in Nucleic acids research (01-07-2009)
    “…Recent interest in non-coding RNA transcripts has resulted in a rapid increase of deposited RNA structures in the Protein Data Bank. However, a…”
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  9. 9

    Dynamics of the minimally frustrated helices determine the hierarchical folding of small helical proteins by Compiani, M, Capriotti, E, Casadio, R

    “…In this paper we aim at determining the key residues of small helical proteins in order to build up reduced models of the folding dynamics. We start by arguing…”
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    The WWWH of remote homolog detection: The state of the art by Fariselli, Piero, Rossi, Ivan, Capriotti, Emidio, Casadio, Rita

    Published in Briefings in bioinformatics (01-03-2007)
    “…The detection of remote homolog pairs of proteins using computational methods is a pivotal problem in structural bioinformatics, aiming to compute protein…”
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    A Minimal Model of Three-State Folding Dynamics of Helical Proteins by Stizza, Alberto, Capriotti, Emidio, Compiani, Mario

    Published in The journal of physical chemistry. B (10-03-2005)
    “…A diffusion-collision-like model is proposed for helical proteins with three-state folding dynamics. The model generalizes a previous scheme based on the…”
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  15. 15

    A Shannon entropy-based filter detects high- quality profile-profile alignments in searches for remote homologues by Capriotti, Emidio, Fariselli, Piero, Rossi, Ivan, Casadio, Rita

    “…Detection of homologous proteins with low‐sequence identity to a given target (remote homologues) is routinely performed with alignment algorithms that take…”
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    Journal Article
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