Search Results - "Cao, Manqiu"

Analytical validation of the Percepta genomic sequencing classifier; an RNA next generation sequencing assay for the assessment of Lung Cancer risk of suspicious pulmonary nodules by Johnson, Marla K, Wu, Shuyang, Pankratz, Daniel G, Fedorowicz, Grazyna, Anderson, Jessica, Ding, Jie, Wong, Mei, Cao, Manqiu, Babiarz, Joshua, Lofaro, Lori, Walsh, P Sean, Kennedy, Giulia C, Huang, Jing

“…Bronchoscopy is a common procedure used for evaluation of suspicious lung nodules, but the low diagnostic sensitivity of bronchoscopy often results in…”
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Oligonucleotide Microarray Analysis of Genomic Imbalance in Children with Mental Retardation by Friedman, J.M., Baross, Ágnes, Delaney, Allen D., Ally, Adrian, Arbour, Laura, Asano, Jennifer, Bailey, Dione K., Barber, Sarah, Birch, Patricia, Brown-John, Mabel, Cao, Manqiu, Chan, Susanna, Charest, David L., Farnoud, Noushin, Fernandes, Nicole, Flibotte, Stephane, Go, Anne, Gibson, William T., Holt, Robert A., Jones, Steven J.M., Kennedy, Giulia C., Krzywinski, Martin, Langlois, Sylvie, Li, Haiyan I., McGillivray, Barbara C., Nayar, Tarun, Pugh, Trevor J., Rajcan-Separovic, Evica, Schein, Jacqueline E., Schnerch, Angelique, Siddiqui, Asim, Van Allen, Margot I., Wilson, Gary, Yong, Siu-Li, Zahir, Farah, Eydoux, Patrice, Marra, Marco A.

“…The cause of mental retardation in one-third to one-half of all affected individuals is unknown. Microscopically detectable chromosomal abnormalities are the…”
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Composite Organic−Inorganic Nanoparticles as Raman Labels for Tissue Analysis by Sun, Lei, Sung, Kung-Bin, Dentinger, Claire, Lutz, Barry, Nguyen, Lienchi, Zhang, Jingwu, Qin, Haoyu, Yamakawa, Mineo, Cao, Manqiu, Lu, Yu, Chmura, AJ, Zhu, Jing, Su, Xing, Berlin, Andrew A, Chan, Selena, Knudsen, Beatrice

“…Composite organic−inorganic nanoparticles (COINs) are novel optical labels for detection of biomolecules. We have previously developed methods to encapsulate…”
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Large-scale genotyping of complex DNA by Kennedy, Giulia C, Matsuzaki, Hajime, Dong, Shoulian, Liu, Wei-min, Huang, Jing, Liu, Guoying, Su, Xing, Cao, Manqiu, Chen, Wenwei, Zhang, Jane, Liu, Weiwei, Yang, Geoffrey, Di, Xiaojun, Ryder, Thomas, He, Zhijun, Surti, Urvashi, Phillips, Michael S, Boyce-Jacino, Michael T, Fodor, Stephen PA, Jones, Keith W

“…Genetic studies aimed at understanding the molecular basis of complex human phenotypes require the genotyping of many thousands of single-nucleotide…”
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Whole-Genome Scan, in a Complex Disease, Using 11,245 Single-Nucleotide Polymorphisms: Comparison with Microsatellites by John, Sally, Shephard, Neil, Liu, Guoying, Zeggini, Eleftheria, Cao, Manqiu, Chen, Wenwei, Vasavda, Nisha, Mills, Tracy, Barton, Anne, Hinks, Anne, Eyre, Steve, Jones, Keith W., Ollier, William, Silman, Alan, Gibson, Neil, Worthington, Jane, Kennedy, Giulia C.

“…Despite the theoretical evidence of the utility of single-nucleotide polymorphisms (SNPs) for linkage analysis, no whole-genome scans of a complex disease have…”
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Analytical performance of Envisia: a genomic classifier for usual interstitial pneumonia by Choi, Yoonha, Lu, Jiayi, Hu, Zhanzhi, Pankratz, Daniel G, Jiang, Huimin, Cao, Manqiu, Marchisano, Cristina, Huiras, Jennifer, Fedorowicz, Grazyna, Wong, Mei G, Anderson, Jessica R, Tom, Edward Y, Babiarz, Joshua, Imtiaz, Urooj, Barth, Neil M, Walsh, P Sean, Kennedy, Giulia C, Huang, Jing

“…Clinical guidelines specify that diagnosis of interstitial pulmonary fibrosis (IPF) requires identification of usual interstitial pneumonia (UIP) pattern…”
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High-Resolution Identification of Chromosomal Abnormalities Using Oligonucleotide Arrays Containing 116,204 SNPs by Slater, Howard R., Bailey, Dione K., Ren, Hua, Cao, Manqiu, Bell, Katrina, Nasioulas, Steven, Henke, Robert, Choo, K.H. Andy, Kennedy, Giulia C.

“…Mutation of the human genome ranges from single base-pair changes to whole-chromosome aneuploidy. Karyotyping, fluorescence in situ hybridization, and…”
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Assessment of algorithms for high throughput detection of genomic copy number variation in oligonucleotide microarray data by Baross, Agnes, Delaney, Allen D, Li, H Irene, Nayar, Tarun, Flibotte, Stephane, Qian, Hong, Chan, Susanna Y, Asano, Jennifer, Ally, Adrian, Cao, Manqiu, Birch, Patricia, Brown-John, Mabel, Fernandes, Nicole, Go, Anne, Kennedy, Giulia, Langlois, Sylvie, Eydoux, Patrice, Friedman, J M, Marra, Marco A

“…Genomic deletions and duplications are important in the pathogenesis of diseases, such as cancer and mental retardation, and have recently been shown to occur…”
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High-throughput generation and engineering of recombinant human antibodies by Krebs, Barbara, Rauchenberger, Robert, Reiffert, Silke, Rothe, Christine, Tesar, Michael, Thomassen, Elisabeth, Cao, Manqiu, Dreier, Torsten, Fischer, David, Höß, Adolf, Inge, Landon, Knappik, Achim, Marget, Matthias, Pack, Peter, Meng, Xian-Qin, Schier, Robert, Söhlemann, Peter, Winter, Jill, Wölle, Joachim, Kretzschmar, Titus

“…The first version of the Human Combinatorial Antibody Library (HuCAL®) is a single-chain Fv-based phage display library (HuCAL®-scFv) with 2×10 9 members…”
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PCD1, a novel gene containing PDZ and LIM domains, is overexpressed in several human cancers by SANMAO KANG, HAIDONG XU, XIAOZHU DUAN, LIU, Jing-Jie, ZHIJUN HE, FANG YU, SILIANG ZHOU, MENG, Xian-Qin, MANQIU CAO, KENNEDY, Giulia C

“…In an effort to discover novel genes differentially expressed in human pancreatic cancer, we have identified a gene named PCD1 (pancreatic cancer derived) that…”
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Molecular profiling of dedicated lung cancer biopsy tissue sample collected at time of diagnostic bronchoscopy by Bellinger, Christina, Bernstein, Michael, Lee, Hans, Wahidi, Momen M., Mahajan, Amit, Chen, Alexander, Shu, Catherine A., Hao, Yangyang, Cao, Manqiu, Griscom, Bailey, Huang, Jing, Walsh, P. Sean, Lofaro, Lori, Wilde, Jonathan, Bulman, William, Kennedy, Giulia

“…e20587 Background: The combined use of molecular biomarker testing and targeted precision therapeutics has led to improved survival in lung cancer. Broadening…”
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DNA Copy Number Analysis in Gastrointestinal Stromal Tumors Using Gene Expression Microarrays by Antonescu, Cristina R., Wu, Kai, Xing, Guoliang Leon, Cao, Manqiu, Turpaz, Yaron, Leversha, Margaret A., Hubbell, Earl, Maki, Robert G., Miyada, C. Garrett, Pillai, Raji

“…Cristina R. Antonescu1, Kai Wu2, Guoliang Leon Xing3, Manqiu Cao2, Yaron Turpaz4, Margaret A. Leversha5, Earl Hubbell3, Robert G. Maki6, C. Garrett Miyada7,…”
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Detection of actionable molecular alterations through combined DNA/RNA molecular profiling of biopsies collected in early-stage lung cancer at time of diagnosis by Babiarz, Joshua, Hao, Yangyang, Cao, Manqiu, Griscom, Bailey, Wilson, David S., Krimsky, William, Sarkar, Saiyad, Bernstein, Michael, Lee, Hans, Wahidi, Momen M., Chen, Alexander, Bellinger, Christina, Lofaro, Lori, Bhorade, Sangeeta Maruti, Huang, Jing, Walsh, P. Sean, Wilde, Jonathan, Kennedy, Giulia

“…Abstract only e20546 Background: Significant progress has been made in improving progression-free survival in lung cancer through the combination of molecular…”
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Description of the data from the Collaborative Study on the Genetics of Alcoholism (COGA) and single-nucleotide polymorphism genotyping for Genetic Analysis Workshop 14 by Edenberg, Howard J, Bierut, Laura J, Boyce, Paul, Cao, Manqiu, Cawley, Simon, Chiles, Richard, Doheny, Kimberly F, Hansen, Mark, Hinrichs, Tony, Jones, Kevin, Kelleher, Mark, Kennedy, Giulia C, Liu, Guoying, Marcus, Gregory, McBride, Celeste, Murray, Sarah Shaw, Oliphant, Arnold, Pettengill, James, Porjesz, Bernice, Pugh, Elizabeth W, Rice, John P, Rubano, Todd, Shannon, Stu, Steeke, Rhoberta, Tischfield, Jay A, Tsai, Ya Yu, Zhang, Chun, Begleiter, Henri

“…The data provided to the Genetic Analysis Workshop 14 (GAW 14) was the result of a collaboration among several different groups, catalyzed by Elizabeth Pugh…”
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Analytical performance of a bronchial genomic classifier by Hu, Zhanzhi, Whitney, Duncan, Anderson, Jessica R, Cao, Manqiu, Ho, Christine, Choi, Yoonha, Huang, Jing, Frink, Robert, Smith, Kate Porta, Monroe, Robert, Kennedy, Giulia C, Walsh, P Sean

“…The current standard practice of lung lesion diagnosis often leads to inconclusive results, requiring additional diagnostic follow up procedures that are…”
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A whole genome long-range haplotype (WGLRH) test for detecting imprints of positive selection in human populations by Zhang, Chun, Bailey, Dione K., Awad, Tarif, Liu, Guoying, Xing, Guoliang, Cao, Manqiu, Valmeekam, Venu, Retief, Jacques, Matsuzaki, Hajime, Taub, Margaret, Seielstad, Mark, Kennedy, Giulia C.

“…Motivation: The identification of signatures of positive selection can provide important insights into recent evolutionary history in human populations…”
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Analysis of SNP content of 82 common copy-number polymorphisms from the Database of Genomic Variations by Slater, Howard R, Bailey, Dione K, Ren, Hua, Cao, Manqiu, Bell, Katrina, Nasioulas, Steven, Henke, Robert, Choo, K H Andy, Kennedy, Giulia C

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Reply to Wirtenberger et al by Slater, Howard R., Bailey, Dione K., Ren, Hua, Cao, Manqiu, Bell, Katrina, Nasioulas, Steven, Henke, Robert, Choo, K.H. Andy, Kennedy, Giulia C.

“…Even with modifications in SNP selection, the current algorithm implemented in CNAT (Affymetrix) would still need to be modified, because it compares…”
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DNA Copy Number Analysis in Gastrointestinal Stromal Tumors Using Gene Expression Microarrays by Raji Pillai, Garrett Miyada, Earl Hubbell, Robert G. Maki, Margaret A. Leversha, Yaron Turpaz, Manqiu Cao, Guoliang Leon Xing, Kai Wu, Cristina R. Antonescu

“…We report a method, Expression-Microarray Copy Number Analysis (ECNA) for the detection of copy number changes using Affymetrix Human Genome U133 Plus 2.0…”
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A genome-wide linkage analysis of alcoholism on microsatellite and single-nucleotide polymorphism data, using alcohol dependence phenotypes and electroencephalogram measures by Zhang, Chun, Cawley, Simon, Liu, Guoying, Cao, Manqiu, Gorrell, Harley, Kennedy, Giulia C

“…The Collaborative Study on the Genetics of Alcoholism (COGA) is a large-scale family study designed to identify genes that affect the risk for alcoholism and…”
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