Search Results - "Campagne, F."

GPCRDB information system for G protein-coupled receptors by Horn, Florence, Bettler, Emmanuel, Oliveira, Laerte, Campagne, Fabien, Cohen, Fred E., Vriend, Gerrit

“…The GPCRDB is a molecular class-specific information system that collects, combines, validates and disseminates heterogeneous data on G protein-coupled…”
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Differential gene body methylation and reduced expression of cell adhesion and neurotransmitter receptor genes in adverse maternal environment by Oh, J-e, Chambwe, N, Klein, S, Gal, J, Andrews, S, Gleason, G, Shaknovich, R, Melnick, A, Campagne, F, Toth, M

“…Early life adversity, including adverse gestational and postpartum maternal environment, is a contributing factor in the development of autism, attention…”
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GPCRDB: An information system for G protein-coupled receptors by Horn, F., Weare, J., Beukers, M. W., Hörsch, S., Bairoch, A., Chen, W., Edvardsen, Ø., Campagne, F., Vriend, G.

“…The GPCRDB is a G protein-coupled receptor (GPCR) database system aimed at the collection and dissemination of GPCR related data. It holds sequences, mutant…”
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Clustalnet: the joining of Clustal and CORBA by CAMPAGNE, F

“…Motivation: Performing sequence alignment operations from a different program than the original sequence alignment code, and/or through a network connection,…”
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Batch mode generation of residue-based diagrams of proteins by Campagne, Fabien, Bettler, Emmanuel, Vriend, Gert, Weinstein, Harel

“…Residue-based diagrams of proteins are graphical representations that can be used in protein information systems. These diagrams make it possible to visually…”
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Interactive construction of residue-based diagrams of proteins: the RbDe web service by Konvicka, K., Campagne, F., Weinstein, H.

“…We announce the Residue-based Diagram Editor (RbDe) web service that allows online construction of residue-based diagrams and the creation of stored diagram…”
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Schematic representation of residue-based protein context-dependent data: an application to transmembrane proteins by Campagne, F., Weinstein, H.

“…An algorithmic method for drawing residue-based schematic diagrams of proteins on a 2D page is presented and illustrated. The method allows the creation of…”
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Visualisation and integration of G protein-coupled receptor related information help the modelling: description and applications of the Viseur program by Campagne, F, Jestin, R, Reversat, J L, Bernassau, J M, Maigret, B

“…G Protein-Coupled Receptors (GPCRs) constitute a superfamily of receptors that forms an important therapeutic target. The number of known GPCR sequences and…”
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SNOSID, a Proteomic Method for Identification of Cysteine S-Nitrosylation Sites in Complex Protein Mixtures by Hao, Gang, Derakhshan, Behrad, Shi, Lei, Campagne, Fabien, Gross, Steven S.

“…Reversible addition of NO to Cys-sulfur in proteins, a modification termed S-nitrosylation, has emerged as a ubiquitous signaling mechanism for regulating…”
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Multiple sequence alignment in HTML: colored, possibly hyperlinked, compact representations by Campagne, F, Maigret, B

“…Protein sequence alignments are widely used in protein structure prediction, protein engineering, modeling of proteins, etc. This type of representation is…”
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Minimum information requested in the annotation of biochemical models (MIRIAM) by Bhalla, Upinder S, Nielsen, Poul, Novère, Nicolas Le, Wanner, Barry L, Klipp, Edda, Spence, Hugh D, Sauro, Herbert, Shapiro, Bruce, Hucka, Michael, Snoep, Jacky L, Campagne, Fabien, Collado-Vides, Julio, Mendes, Pedro, Crampin, Edmund J, Halstead, Matt, Finney, Andrew

“…Most of the published quantitative models in biology are lost for the community because they are either not made available or they are insufficiently…”
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Urine proteomics for profiling of human disease using high accuracy mass spectrometry by Kentsis, Alex, Monigatti, Flavio, Dorff, Kevin, Campagne, Fabien, Bachur, Richard, Steen, Hanno

“…Knowledge of the biologically relevant components of human tissues has enabled the invention of numerous clinically useful diagnostic tests, as well as…”
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Tas1r3 , encoding a new candidate taste receptor, is allelic to the sweet responsiveness locus Sac by Margolskee, Robert F, Max, Marianna, Shanker, Y. Gopi, Huang, Liquan, Rong, Minqing, Liu, Zhan, Campagne, Fabien, Weinstein, Harel, Damak, Sami

“…The ability to taste the sweetness of carbohydrate-rich foodstuffs has a critical role in the nutritional status of humans. Although several components of…”
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Deep Sequencing of Human Renal Allografts and Discovery of MicroRNA Signatures of Allograft Fibrosis: 2267 by Muthukumar, T., Ben-Dov, I. Z., Ding, R., Campagne, F., Tuschl, T., Suthanthiran, M.

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Crooked Tail (Cd) Model of Human Folate-Responsive Neural Tube Defects Is Mutated in Wnt Coreceptor Lipoprotein Receptor-Related Protein 6 by Carter, Michelle, Chen, Xu, Slowinska, Bozena, Minnerath, Sharon, Glickstein, Sara, Shi, Lei, Campagne, Fabien, Weinstein, Harel, Ross, M. Elizabeth, Anderson, Kathryn V.

“…A cranial neural tube defect in Crooked tail (Cd) mice is prevented with prenatal dietary folic acid Cd positional cloning reveals a missense mutation of a…”
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Pseudomonas aeruginosa SoxR Does Not Conform to the Archetypal Paradigm for SoxR-Dependent Regulation of the Bacterial Oxidative Stress Adaptive Response by Palma, Marco, Zurita, Juan, Ferreras, Julian A, Worgall, Stefan, Larone, Davise H, Shi, Lei, Campagne, Fabien, Quadri, Luis E. N

“…SoxR is a transcriptional regulator that controls an oxidative stress response in Escherichia coli. The regulator is primarily activated by superoxide…”
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TissueInfo: high-throughput identification of tissue expression profiles and specificity by Skrabanek, Lucy, Campagne, Fabien

“…We describe TissueInfo, a knowledge-based method for the high-throughput identification of tissue expression profiles and tissue specificity. TissueInfo…”
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Interoperability calls for an unusual mix of skills by Campagne, Fabien

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Quantitative information management for the biochemical computation of cellular networks by Campagne, Fabien, Neves, Susana, Chang, Chiung-wen, Skrabanek, Lucy, Ram, Prahlad T, Iyengar, Ravi, Weinstein, Harel

“…Understanding complex protein networks within cells requires the ability to develop quantitative models and to numerically compute the properties and behavior…”
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Building a protein name dictionary from full text: a machine learning term extraction approach by Shi, Lei, Campagne, Fabien

“…The majority of information in the biological literature resides in full text articles, instead of abstracts. Yet, abstracts remain the focus of many publicly…”
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