Search Results - "Bujarski, J.J."

Next generation sequencing reveals packaging of host RNAs by brome mosaic virus by Shrestha, N., Weber, P.H., Burke, S.V., Wysocki, W.P., Duvall, M.R., Bujarski, J.J.

“…•Encapsidated RNA from highly purified BMV virions were sequenced by using NGS-RNASeq.•BMV packages host RNAs including ribosomal RNAs, mRNAs, and organellar…”
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Modulation of replication, aminoacylation and adenylation in vitro and infectivity in vivo of BMV RNAs containing deletions within the multifunctional 3′ end by Bujarski, J.J., Ahlquist, P., Hall, T.C., Dreher, T.W., Kaesberg, P.

“…The genome of brome mosaic virus (BMV) is comprised of three (+) strand RNAs, each containing a similar, highly structured, 200 base long sequence at its 3′…”
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Engineering of homologous recombination hotspots with AU-rich sequences in brome mosaic virus by Nagy, P.D. (University of Massachusetts, Amherst, MA.), Bujarski, J.J

“…Previously, we observed that crossovers sites of RNA recombinants clustered within or close to AU-rich regions during genetic recombination in brome mosaic…”
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RNA-RNA recombination and evolution in virus-infected plants by Simon, A.E. (University of Massachusetts, Amherst, MA.), Bujarski, J.J

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Efficient system of homologous RNA recombination in brome mosaic virus: sequence and structure requirements and accuracy of crossovers by Nagy, P.D. (Northern Illinois University, De Kalb, IL.), Bujarski, J.J

“…Brome mosaic virus (BMV), a tripartite positive-stranded RNA virus of plants engineered to support intersegment RNA recombination, was used for the…”
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Homologous RNA recombination in brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers by Nagy, P.D. (Northern Illinois University, De Kalb, IL.), Bujarski, J.J

“…Brome mosaic virus, a tripartite positive-stranded RNA virus of plants, was used for the determination of sequence requirements of imprecise (aberrant)…”
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Mutations in the N terminus of the brome mosaic virus polymerase affect genetic RNA-RNA recombination by Figlerowicz, M. (Polish Academy of Sciences, Poznan, Poland.), Nagy, P.D, Tang, N, Kao, C.C, Bujarski, J.J

“…Article Usage Stats Services JVI Citing Articles Google Scholar PubMed Related Content Social Bookmarking CiteULike Delicious Digg Facebook Google+ Mendeley…”
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Targeting the site of RNA-RNA recombination in brome mosaic virus with antisense sequences by Nagy, P.D, Bujarski, J.J

“…It has been postulated that local hybridizations between viral RNAs can mediate recombination in brome mosaic virus (BMV) and in poliovirus. To test this…”
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Genetic recombination between RNA components of a multipartite plant virus by Bujarski, J.J, Kaesberg, P

“…Genetic recombination of DNA is one of the fundamental mechanisms underlying the evolution of DNA-based organisms and results in their diversity and…”
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Effect of 5' and 3' terminal sequences, overall length, and coding capacity on the accumulation of defective RNAs associated with broad bean mottle bromovirus in planta by Pogany, J, Romero, J, Bujarski, J.J

“…Broad bean mottle bromovirus (BBMV) was shown to accumulate RNA2-derived defective interfering (DI) RNAs [Romero et al., Virology 194, 576-584 (1993); Pogany…”
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Characterization of defective interfering RNA components that increase symptom severity of broad bean mottle virus infections by Romero, J, Huang, Q, Pogany, J, Bujarski, J J

“…Several strains of the broad bean mottle virus (BBMV), an icosahedral tripartite plant RNA virus, which show distinct reactions on certain plant hosts have…”
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Mutational analysis of the coat protein gene of brome mosaic virus: effects on replication and movement in barley and in Chenopodium hybridum by Flasinski, S. (The Samuel Roberts Noble Foundation Inc., Ardmore, OK.), Dzianott, A, Pratt, S, Bujarski, J.J

“…The coat protein (CP) open reading frame (ORF) of brome mosaic virus (BMV) has been mutated to study host-related CP functions in barley, a systemic host, and…”
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De Novo Generation of Defective Interfering-like RNAs in Broad Bean Mottle Bromovirus by Pogany, Judit, Romero, Javier, Huang, Qi, Sgro, Jean-Yves, Shang, Hongzhong, Bujarski, Jozef J

“…Broad bean mottle virus (BBMV) is the only member of the bromoviruses that is known to accumulate defective-interfering (DI) RNAs (Romero et al., Virology 194,…”
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Genetic recombination in brome mosaic virus: effect of sequence and replication of RNA on accumulation of recombinants by Nagy, P.D. (Northern Illinois University, De Kalb, IL), Bujarski, J.J

“…In order to facilitate the isolation of recombinants in brome mosaic virus, a series of duplication mutants with alterations in the RNA3 3' noncoding region…”
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Infectious transcripts from PCR-amplified broad bean mottle bormovirus cDNA clones and variable nature of leader regions in RNA 3 segment by Pogany, J, Huang, Q, Romero, J, Nagy, P.D, Bujarski, J.J

“…The genome of broad bean mottle bromovirus (BBMV) contains three positive-sense ssRNA segments, each capped with m7 GpppA. Full-length transcribable cDNA…”
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Molecular studies of genetic RNA-RNA recombination in brome mosaic virus by Bujarski, J J, Nagy, P D, Flasinski, S

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The nucleotide sequence and genome organization of the RNA2 and RNA3 segments in broad bean mottle virus by Romero, J, Dzianott, A M, Bujarski, J J

“…Complete nucleotide sequences of broad bean mottle virus (BBMV) genomic RNAs 2 and 3 were determined. They consist of 2811 and 2293 nucleotides, respectively…”
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Structure-based rationale for the rescue of systemic movement of brome mosaic virus by spontaneous second-site mutations in the coat protein gene by Flasinski, S, Dzianott, A, Speir, J A, Johnson, J E, Bujarski, J J

“…We describe spontaneous second-site reversions within the coat protein open reading frame that rescue the systemic-spread phenotype and increase virion…”
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Foreign Complementary Sequences Facilitate Genetic RNA Recombination in Brome Mosaic Virus by Dzianott, Aleksandra, Flasinski, Stanislaw, Bujarski, Jozef J.

“…We have demonstrated that local antisense sequences can mediate genetic recombination within the 3′ noncoding region among brome mosaic virus (BMV) RNAs (P…”
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The nucleotide sequence and genome organization of the RNA-1 segment in two bromoviruses: broad bean mottle virus and cowpea chlorotic mottle virus by Dzianott, A M, Bujarski, J J

“…The complete nucleotide sequences of the RNA-1 segments in broad bean mottle virus (BBMV) and cowpea chlorotic mottle virus (CCMV) were determined. BBMV RNA-1…”
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