Search Results - "Bryant, David"

popart: full‐feature software for haplotype network construction by Leigh, Jessica W., Bryant, David, Nakagawa, Shinichi

“…Summary Haplotype networks are an intuitive method for visualising relationships between individual genotypes at the population level. Here, we present popart,…”
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Special Issue - Cell and Tissue Polarity by Bryant, David M

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We are the system by Bryant, David M

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From cells to organs: building polarized tissue by Bryant, David M, Mostov, Keith E

“…Key Points Most cells in the body are polarized, showing some level of shape and functional asymmetry, such as apico–basal or front–back polarity. Tissues are…”
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The ARF GTPase regulatory network in collective invasion and metastasis by Nikolatou, Konstantina, Bryant, David M, Sandilands, Emma

“…The ability to remodel and move cellular membranes, and the cargoes regulated by these membranes, allows for specialised functions to occur in distinct regions…”
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Inferring species trees directly from biallelic genetic markers: bypassing gene trees in a full coalescent analysis by Bryant, David, Bouckaert, Remco, Felsenstein, Joseph, Rosenberg, Noah A, RoyChoudhury, Arindam

“…The multispecies coalescent provides an elegant theoretical framework for estimating species trees and species demographics from genetic markers. However,…”
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Pilot-scale production of xylo-oligosaccharides and fermentable sugars from Miscanthus using steam explosion pretreatment by Bhatia, Rakesh, Winters, Ana, Bryant, David N., Bosch, Maurice, Clifton-Brown, John, Leak, David, Gallagher, Joe

“…[Display omitted] •~50 % (w/w) of initial xylan in biomass recovered as XOS in the liquid fraction.•Xylobiose yields of up to 500 g/kg of initial xylan using…”
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Understanding and engineering beneficial plant-microbe interactions: plant growth promotion in energy crops by Farrar, Kerrie, Bryant, David, Cope-Selby, Naomi

“…Plant production systems globally must be optimized to produce stable high yields from limited land under changing and variable climates. Demands for food,…”
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Statistical flaws undermine pre-Columbian chicken debate by Bryant, David

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A Molecular Switch for the Orientation of Epithelial Cell Polarization by Bryant, David M., Roignot, Julie, Datta, Anirban, Overeem, Arend W., Kim, Minji, Yu, Wei, Peng, Xiao, Eastburn, Dennis J., Ewald, Andrew J., Werb, Zena, Mostov, Keith E.

“…The formation of epithelial tissues containing lumens requires not only the apical-basolateral polarization of cells, but also the coordinated orientation of…”
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Molecular Regulation of Lumen Morphogenesis by Datta, Anirban, Bryant, David M., Mostov, Keith E.

“…The asymmetric polarization of cells allows specialized functions to be performed at discrete subcellular locales. Spatiotemporal coordination of polarization…”
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Application of phylogenetic networks in evolutionary studies by Huson, Daniel H, Bryant, David

“…The evolutionary history of a set of taxa is usually represented by a phylogenetic tree, and this model has greatly facilitated the discussion and testing of…”
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Role of membrane traffic in the generation of epithelial cell asymmetry by Apodaca, Gerard, Gallo, Luciana I., Bryant, David M.

“…Epithelial cells have an apical–basolateral axis of polarity, which is required for epithelial functions including barrier formation, vectorial ion transport…”
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A molecular network for de novo generation of the apical surface and lumen by Mostov, Keith E, Bryant, David M, Datta, Anirban, Rodríguez-Fraticelli, Alejo E, Peränen, Johan, Martín-Belmonte, Fernando

“…Polarized-membrane trafficking supports the delivery of polarity proteins to discrete plasma-membrane domains, although the interplay between trafficking and…”
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Complex Polarity: Building Multicellular Tissues Through Apical Membrane Traffic by Román‐Fernández, Alvaro, Bryant, David M.

“…The formation of distinct subdomains of the cell surface is crucial for multicellular organism development. The most striking example of this is apical‐basal…”
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Optimising parameters for pilot scale steam explosion and continuous pressurised disc refining of Miscanthus and sugarcane bagasse for xylose and xylo-oligosaccharide release by Warren-Walker, David, Ravella, Sreenivas Rao, Gallagher, Joe, Winters, Ana, Charlton, Adam, Bryant, David N.

“…[Display omitted] •Successful translation of steam explosion parameters to pressurised disc refining.•Miscanthus xylan hydrolysis of ∼ 90 % at batch SE-THP…”
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Production of oligosaccharides and biofuels from Miscanthus using combinatorial steam explosion and ionic liquid pretreatment by Bhatia, Rakesh, Lad, Jai B., Bosch, Maurice, Bryant, David N., Leak, David, Hallett, Jason P., Franco, Telma T., Gallagher, Joe A.

“…•For oligosaccharides production, SE and [C2mim][OAc] pretreatment is advised.•90% (w/w) of initial biomass xylan dissolved to XOS via [C2mim][OAc]…”
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Mechanisms of apical–basal axis orientation and epithelial lumen positioning by Overeem, Arend W, Bryant, David M, van IJzendoorn, Sven C.D

“…Highlights • ECM, endosomes, and mitosis coordinate polarity orientation and lumen position. • Defects in apical–basal polarity axis orientation are associated…”
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Endosymbiotic origin and differential loss of eukaryotic genes by Ku, Chuan, Nelson-Sathi, Shijulal, Roettger, Mayo, Sousa, Filipa L., Lockhart, Peter J., Bryant, David, Hazkani-Covo, Einat, McInerney, James O., Landan, Giddy, Martin, William F.

“…Chloroplasts arose from cyanobacteria, mitochondria arose from proteobacteria. Both organelles have conserved their prokaryotic biochemistry, but their genomes…”
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The phospholipid PI(3,4)P 2 is an apical identity determinant by Román-Fernández, Álvaro, Roignot, Julie, Sandilands, Emma, Nacke, Marisa, Mansour, Mohammed A, McGarry, Lynn, Shanks, Emma, Mostov, Keith E, Bryant, David M

“…Apical-basal polarization is essential for epithelial tissue formation, segregating cortical domains to perform distinct physiological functions. Cortical…”
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