Search Results - "Brownlee, Robert T. C."
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Effect of atomic charge, solvation, entropy, and ligand protonation state on MM-PB(GB)SA binding energies of HIV protease
Published in Journal of computational chemistry (15-12-2012)“…The molecular mechanics‐Poisson‐Boltzmann surface area (MM‐PBSA) and MM‐generalized‐Born surface area (MM‐GBSA) approaches are commonly used in molecular…”
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Synthetic Preparation of N-Methyl-α-amino Acids
Published in Chemical reviews (01-12-2004)“…Amino acids are incorporated in proteins, peptides, enzymes, hormones and an enormous array of secondary metabolites. Aurelio et al describe methods for the…”
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Design, synthesis, and DNA sequence selectivity of formaldehyde-mediated DNA-adducts of the novel N-(4-aminobutyl) acridine-4-carboxamide
Published in Bioorganic & medicinal chemistry letters (15-12-2014)“…A novel derivative of the anti-tumor agent N-[2-(dimethylamino)ethyl]acridine-4-carboxamide (DACA) was prepared by reduction of 9-oxoacridan-4-carboxylic acid…”
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An Efficient Synthesis of N-Methyl Amino Acids by Way of Intermediate 5-Oxazolidinones
Published in Journal of organic chemistry (04-04-2003)“…N-Methyl amino acids occur in many natural products. Experimental strategies are presented for a unified approach to the synthesis of N-methyl derivatives…”
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Effect of Structural Stress on the Flexibility and Adaptability of HIV-1 Protease
Published in Journal of chemical information and modeling (23-05-2011)“…Resistance remains a major issue with regards to HIV-1 protease, despite the availability of numerous HIV-1 protease inhibitors and copious amounts of…”
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Binding of an RNA pol II Ligand to the WW Domain of Pin1 Using Molecular Dynamics Docking Simulations
Published in Journal of chemical theory and computation (13-10-2009)“…A novel docking protocol using a long, all atom molecular dynamics (MD) simulation, in an explicit solvent medium, without using any distance constraints is…”
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A Novel Synthesis of N-Methyl Asparagine, Arginine, Histidine, and Tryptophan
Published in Organic letters (17-10-2002)“…N-Methyl amino acid residues in peptides modify several pharmacologically useful parameters, but synthesis of alkylated peptides is hampered by unavailability…”
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PinA from Aspergillus nidulans binds to pS/pT-P motifs using the same Loop I and XP groove as mammalian Pin1
Published in Biochimica et biophysica acta (01-09-2007)“…Binding of the Cdc25c-T48 ligand to PinA from Aspergillus nidulans has been characterised by the identification of 15N and 1H resonances from 1H– 15N HSQC NMR…”
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A total synthesis of a highly N-methylated cyclodepsipeptide [2S,3S-Hmp]-aureobasidin L using solid-phase methods
Published in Tetrahedron (01-04-2014)“…[2S,3S-Hmp]-Aureobasidin L 2 has been successfully synthesised through a combination of solution- and solid-phase peptide synthesis. All of the Fmoc-protected…”
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Can cyclic HIV protease inhibitors bind in a non-preferred form? An ab initio, DFT and MM-PB(GB)SA study
Published in Journal of molecular modeling (01-03-2013)“…X-ray crystallography studies have identified that most cyclic inhibitors of HIV protease (including cyclic ureas) bind in a symmetric manner, however some…”
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A convenient gram-scale synthesis of uridine diphospho( 13C 6)glucose
Published in Carbohydrate research (24-07-2006)“…A simple gram-scale synthesis of uridine diphospho( 13C 6)glucose is presented from d-( 13C 6)glucose. The critical step uses a 1 H-tetrazole-catalyzed…”
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Structural characterisation of PinA WW domain and a comparison with other Group IV WW domains, Pin1 and Ess1
Published in Biochimica et biophysica acta (01-09-2008)“…The NMR solution structure of the PinA WW domain from Aspergillus nidulans is presented. The backbone of the PinA WW domain is composed of a triple-stranded…”
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Characterisation of the extracellular polysaccharides produced by isolates of the fungus Acremonium
Published in Carbohydrate research (26-11-2007)“…Solid state 13C NMR studies and enzymatic digestion of the extracellular glucans from the fungi Acremonium persicinum C38 (QM107a) and Acremonium sp. strain…”
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Solvent affects the conformation of virginiamycin M1 (pristinamycin IIA, streptogramin A)
Published in Organic & biomolecular chemistry (21-10-2004)“…The streptogramins are antibiotics which act by binding two different components at separate nearby sites on the bacterial 50S ribosome, inhibiting protein…”
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Solution structures by NMR of a novel antifungal drug: Petriellin A
Published in Organic & biomolecular chemistry (01-01-2006)“…Petriellin A is a novel cyclic depsipeptide antifungal compound consisting of nine l-configured residues, one d-phenyllactic acid (PhLac) and three unknown…”
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An FcγRIIa-binding peptide that mimics the interaction between FcγRIIa and IgG
Published in Molecular immunology (01-01-2008)“…A disulphide-constrained peptide that binds to the low affinity Fc receptor, FcγRIIa (CD32) has been identified and its structure solved by NMR. Linear (7-mer…”
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The conformational flexibility of the antibiotic virginiamycin M1
Published in European biophysics journal (01-07-2005)“…The antibiotic virginiamycin is a combination of two molecules, virginiamycin M^sub 1^ (VM1) and virginiamycin S^sub 1^ (VS1) or analogues, which function…”
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Systematic Electrochemical Synthesis of Reduced Forms of the alpha-[S(2)Mo(18)O(62)](4)(-) Anion
Published in Inorganic chemistry (09-02-1998)Get full text
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Para-substituent C-13 chemical shifts in substituted benzenes. 1. Updating the .sigma.R0 scale and analysis of aprotic solvent effects
Published in Journal of organic chemistry (01-12-1979)Get full text
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